Bubalus bubalis (water buffalo): 102393091
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Entry
102393091 CDS
T05912
Symbol
ATG16L1
Name
(RefSeq) autophagy-related protein 16-1 isoform X3
KO
K17890
autophagy-related protein 16-1
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04136
Autophagy - other
bbub04140
Autophagy - animal
bbub04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102393091 (ATG16L1)
04136 Autophagy - other
102393091 (ATG16L1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
102393091 (ATG16L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bbub04131
]
102393091 (ATG16L1)
03029 Mitochondrial biogenesis [BR:
bbub03029
]
102393091 (ATG16L1)
Membrane trafficking [BR:
bbub04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
102393091 (ATG16L1)
Others
Specific organelles associated proteins
Auto phagosome
102393091 (ATG16L1)
Mitochondrial biogenesis [BR:
bbub03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
102393091 (ATG16L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
ATG16
Beta-prop_WDR3_1st
WD40
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_Aladin
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_RIG_2nd
eIF2A
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
NBCH_WD40
Tricorn_2nd
Beta-prop_DCAF12
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_ACSF4
CCDC93_CC
Beta-prop_NWD2_C
ZapB
Beta-prop_VPS8
CC_Bre1
DUF8181
Tricorn_N
Vma22_CCDC115
HTH_6
PALB2_WD40
Phage_GPO
Fez1
DUF2332
Motif
Other DBs
NCBI-GeneID:
102393091
NCBI-ProteinID:
XP_044801229
LinkDB
All DBs
Position
6:112621531..112665086
Genome browser
AA seq
623 aa
AA seq
DB search
MSSGLRAAVFPRWKRHISEELRRRDRLQRQAFEEIILQYNKLLEKSDLHSVLAHKLQAEK
HDVPNRHEISPGHDGSWNDSQLQEMAQLRIKHQEELTELHKKRGELAQLVIDLNNQMQQK
DKEMQMNEAKIAEYLQTISDLETECQELRTKLQDLERANQTLKDEYDALQITFTALEEKL
RKTSEENQELVTRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEQDDDI
EVLVDETSEHPEETSPVRAISRAATKRLSQPAGGLLDSITNIFGLSESPLLGHHSSDAAR
RRSVSSFPVPQDNVDPHPGAGKEVRVPTTAVSVFDAHDGEVNAVQFSPGSRLLATGGMDR
RVKLWEVFGDKCEFKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTL
TGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMS
GHFDKKIRFWDIRSESIVREMELLGKITALDLNPERTELLSCSRDDLLKIIDLRINAVRQ
TFSAPGFKCGSDWTRAVFSPDGSYVAAGAAEGSLYIWNVLSGKVEKVLSKHHSSSINAVA
WSPAGSHVVTVDKGSKAVLWSEY
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgggcctccgcgctgccgtcttcccgcgttggaagcgccacatctcggaggag
ctgaggcgccgggaccggctgcagaggcaggcgttcgaggagatcatcctgcagtataac
aagttgctggaaaagtcagatcttcattcagtgctggcccataagctacaagccgaaaag
catgacgtaccaaacaggcatgagataagtcccggacatgatggttcatggaatgatagt
cagctgcaagaaatggcccagctgagaattaaacaccaagaagagctgactgaactgcac
aagaaacgtggggagttagcccagttggtgattgacctgaataaccaaatgcagcagaag
gacaaggagatgcagatgaacgaagccaaaattgcagaatacctgcagaccatctctgac
ctggagaccgagtgccaggagctacgcactaagcttcaggaccttgaaagagccaaccag
accctgaaggatgaatatgacgccctgcagatcactttcactgccctcgaggagaagctg
cggaaaacttccgaggagaaccaggagctggtcacccggtggatggccgagaaagcccag
gaggccaaccgcctaaacgcggagaatgaaaaggactcaaggaggcgacaagcccggctg
cagaaggagctcgcagaagcagcgaaggagcctctgccagttgagcaggatgatgatatt
gaagtcctcgtggatgaaacctctgagcaccctgaggagacctctcccgtgcgagccatc
agcagagcggccactaagcgactctcgcagcctgctggaggccttctggattctatcact
aatatctttggtctgtccgagtctccccttttgggacatcactcttctgatgctgccagg
aggcgctctgtctcttcctttccagttccccaggataacgtggatcctcatcccggtgct
ggtaaagaagtgcgagtgccgacgactgcagtgtctgtctttgacgcgcatgatggggag
gtcaacgctgtgcagttcagcccaggttcccggctcctggccacaggaggcatggatcgg
agggtgaagctctgggaagtgtttggagacaaatgtgagttcaagggctccctgtctggc
agtaatgcagggattacaagcattgaatttgatagtgctggatcttacctcttagcagct
tcaaatgattttgcaagccgcatctggaccgtggatgactaccggttacggcacacgctc
acaggacacagtggcaaagtgctgtctgccaagttcctgctggacaacgcgcgcatcgtt
tctggaagtcacgaccggaccctcaaactctgggatctacgcagcaaagtctgcataaag
acggtatttgcgggatccagctgcaatgacattgtctgcacagagcagtgtgtgatgagc
gggcattttgacaagaaaattcgtttctgggacatccgatcagagagtattgtccgagag
atggagctcttgggaaagatcactgccctggacttaaatccagaaagaactgaactcctc
agctgctctcgagatgacctgctgaaaattatagacctacgaataaatgctgtcagacag
acgttcagcgcgccaggcttcaagtgcggctccgactggacgagagctgtgttcagccct
gacggcagttacgtagcagctggcgcggccgagggctcgctgtacatctggaacgtgctg
tctgggaaagtggagaaggtcctctcaaagcatcacagctcgtccatcaacgcggtggcc
tggtcccccgccggctcccacgtggtcactgtggacaaaggaagtaaggccgtgctgtgg
tcggagtattga
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