Bubalus bubalis (water buffalo): 102393259
Help
Entry
102393259 CDS
T05912
Symbol
RFX5
Name
(RefSeq) DNA-binding protein RFX5
KO
K08061
regulatory factor X 5
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04612
Antigen processing and presentation
bbub05152
Tuberculosis
bbub05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
102393259 (RFX5)
09160 Human Diseases
09171 Infectious disease: bacterial
05152 Tuberculosis
102393259 (RFX5)
09163 Immune disease
05340 Primary immunodeficiency
102393259 (RFX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bbub03000
]
102393259 (RFX5)
Transcription factors [BR:
bbub03000
]
Eukaryotic type
Other basic domains
RF-X
102393259 (RFX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX5_DNA_bdg
RFX5_N
RFX_DNA_binding
Pox_D5
Motif
Other DBs
NCBI-GeneID:
102393259
NCBI-ProteinID:
XP_044800310
LinkDB
All DBs
Position
6:19560789..19567602
Genome browser
AA seq
615 aa
AA seq
DB search
MAEDEPNAKSPKTGGRTSSGSAEAGEPTTLLQRLRGTISKAVQNKVEAILQDVQKFSDND
KLYLYLQLPSGPSTGDKSSEPSTLSNEEYMYAYRWIRNHLEEHTDTCLPKQSVYDAYRKY
CESLACCRPLSTANFGKIIREIFPDIKARRLGGRGQSKYCYSGIRRKTLVSMPPLPGLDL
KGSESPEMGPEVTPAPRDELVEAACALTCDWAERILKRSFSSIVEVARFLLQQHLISARS
AHAHVLKTVGLAEEDEHAPRERSSKSKNGVENLEGGSHKRPERQVQPPKELDPRAGAGPS
ARGERKKSAAESPAPVANNPQVNALVARLPLLLPRAPRSLIPPIRVSPPILAPKLSSGTL
KMAALPLPSRAGGPQAAVPIINMILPTVPALPGPGPGPGQAPPGGLAQPRGAENREVGIG
GDLGPHDKGVKRTAEVPVSEASGQDPPAKATKQDLDDTGSDAKRKRGRPRKKSGGSRERN
STPDKSAAAVDSAQSSRLPRETWASGGESNSAGGSGGPGPVGEAEKGVLAQGQEDGAVSK
GGRGPSSRHAKEAEDKIPPVTPKVSVIRGSRSQKEALHLVRGEADTSIQGNKDLKGHVLP
SSIPHERKDPKAAPP
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagatgaacctaatgctaagagcccaaagactgggggaaggacttcctcaggt
agtgctgaggcgggggaacccaccacccttcttcagaggctccgaggtaccatttccaag
gccgtgcagaacaaagtagaggcgatcctgcaagatgtacagaaattctcagacaatgac
aagctgtatctctaccttcagctcccctcggggcccagtactggagacaaaagctcagag
ccaagtacactcagcaacgaggagtacatgtatgcttacaggtggatccgcaaccaccta
gaggagcataccgacacctgcctgccaaaacaaagtgtttatgatgcctatcggaagtac
tgcgagagcctcgcgtgttgccgcccactcagcacagccaactttggcaaaatcatcaga
gagatcttccctgacatcaaggcccgaaggcttggtggccggggccagtccaaatattgc
tacagtggcatacgaaggaagaccttggtatctatgccgcccttgcccggacttgaccta
aagggctctgagagtccagaaatgggcccagaagtaaccccagcgcctcgggatgagctg
gtggaagcagcctgtgccttgacctgtgactgggccgagcgaatcctgaaacggtccttc
agttccattgttgaggttgcccgcttcctgctacagcagcatctcatctctgcccgatct
gcacacgcccatgtgctcaaaactgtgggactcgctgaagaggacgaacatgcccctcgg
gaacggtcatctaaatccaagaatggggtagagaacctggagggcggttctcataagaga
ccagagagacaggtccagcctcctaaagagctagacccccgggctggggctggcccctct
gcacgtggagagcgaaagaagagtgcagcggagagcccggcgccagtagccaataacccg
caggttaatgccctagtggcacggctgcctctgctcctcccccgggcccctcgctcactt
attccgccaatccgagtctctccacccatcttggcccccaaactttcttcaggcactctg
aaaatggctgcactgcctctgcccagtagggctgggggaccccaagcagctgttcccatc
attaacatgatcttaccaacggttcctgctttgcctggacctggacctgggcctgggcaa
gctccccctggggggctcgctcagccaaggggtgcagagaacagggaagtgggcataggt
ggtgacctgggaccccatgacaaaggtgtcaagaggacagctgaagtgcctgtgagcgaa
gccagtgggcaggacccaccagctaaagccacaaagcaagatctagacgatacaggaagt
gatgccaaaagaaaacgggggcgccctcgaaaaaaatcaggtggaagtagggaaaggaat
tctacccccgacaaatcagcagctgctgtggactcagcccagtcctcaaggttaccacgg
gagacatgggcctctggaggggagagcaactcagctggagggtcaggggggccagggcca
gtgggagaggctgagaagggggtgcttgcccaaggtcaggaggatggcgctgtttccaaa
ggaggaaggggccccagttcccgtcatgccaaagaagcagaagataaaattcctcctgtc
acccccaaagtgagtgtcatcaggggcagtagaagccaaaaggaggctcttcatttggtc
aggggagaagcagacacctccatacagggtaataaagacttaaaggggcatgtgcttccg
agctccattccccatgagcggaaagaccccaaagcagcacccccatga
DBGET
integrated database retrieval system
