Bubalus bubalis (water buffalo): 102393285
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Entry
102393285 CDS
T05912
Symbol
HCN3
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3 isoform X3
KO
K04956
hyperpolarization activated cyclic nucleotide-gated potassium channel 3
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
102393285 (HCN3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bbub04040
]
102393285 (HCN3)
Ion channels [BR:
bbub04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
102393285 (HCN3)
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Paralog
GFIT
Motif
Pfam:
Ion_trans_N
Ion_trans
cNMP_binding
EOS1
Motif
Other DBs
NCBI-GeneID:
102393285
NCBI-ProteinID:
XP_044800211
LinkDB
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Position
6:complement(15417213..15427344)
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AA seq
844 aa
AA seq
DB search
MALGRPRLRPPCPASARLSPGGAARPARRPRRSLSHTPPPPGALAVPSRLRLRSEPARLL
PLRLREGSGGPEWPQQGLGGQTCKLTGVMEAEQRPMTGANDGATAGLEAAPPAAPASTTT
ASGPVPGSRPGPEPKRRQLGTLLQPTVNKFSLRVFGSHKAVEIEQERVKSAGAWIIHPYS
DFRFYWDLIMLLLMVGNLIVLPVGITFFKEENSPPWIVFNVLSDTFFLMDLVLNFRTGIV
VEEGAEILLAPRAIRTRYLRTWFLVDLISSIPVDYIFLVVELEPRLDAEVYKTARALRIV
RFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRIFNLIGMMLLLCHWDGCLQF
LVPMLQDFPPDCWVSISHMVAPVGMPDVWLTMLSMIVGATCYAMFIGHATALIQSLDSSR
RQYQEKYKQVEQYMSFHKLPADTRQRIHEYYEHRYQGKMFDEESILGELSEPLREEIINF
TCRGLVAHMPLFAHADPSFVTAVLTKLRFEVFQPGDLVVREGSVGRKMYFIQHGLLSVLA
RGARDTRLTDGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDHFNAVLEEFPMMRRAFE
TVAMDRLRRIGKKNSILQRKRSEPSPGSSGGVMEQHLVQHDRDMARGVQGLAPSTGARLS
GKPVLWEPLVHAPLQAAAVTSSVAIALTHQRGPLPLSPDSPVTLLARSARRSAGAGSPAS
PLVPVRAGPLARGPWASTSRLPAPPARTLHASLSRAGRSQVSLLGPPPGGGGRRLGPRGR
PLSASQPSLPQRAAGDGSPGRKGSGSERLPPSGLLTKPPGTAQPPRLPVPEPATPRGPQL
SANM
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atggctctcggtcgaccccgcctccgcccgccctgcccagcctccgctcggctgtcgcca
gggggcgcagcgcgacccgcccgccgccctcggaggagtctgtcgcacacaccccctccg
cccggcgctctggcagttcccagccgactacgcctccgctctgagcccgcccggctgctc
ccgctccgactccgggaggggtcgggaggtcccgaatggccgcagcagggtctaggaggc
caaacgtgtaagctgacgggcgtcatggaggcggagcagaggccaatgactggggccaac
gacggggcgaccgctgggctggaggctgcgcctcctgctgccccggcgtctacaaccaca
gcctcgggtccggtccctgggtccaggcccgggcccgagcccaagaggaggcagctcgga
accctgctccagcccacggtcaacaagttctctcttcgcgtgttcggcagccacaaagca
gtggaaatcgagcaggagcgggtcaagtcagcgggggcctggatcatccacccgtacagc
gacttccgcttttactgggacctgatcatgctcctgctgatggtggggaacctcattgtg
ctacccgtgggcatcaccttcttcaaggaagagaactctccaccttggattgtcttcaac
gtcctctctgacactttcttcctgatggatctggtgctcaacttccgcacaggcatcgtg
gtagaggagggtgctgagatcctgctggcaccgcgggccatccgcacacgctacctgcgc
acctggttcctggttgacctcatctcctctattcctgtggattacatctttctggtggtg
gagctggagccacgactggatgctgaggtctacaaaacagcgcgggccctgcgcatcgtg
cgtttcaccaagatcctcagcctgctgcggctgctccgcctctcccgcctcatccgctac
atacaccagtgggaggagatctttcacatgacctatgacctggccagtgctgtggttcgc
atcttcaacctcatcggaatgatgctgctgctgtgtcactgggatggctgtctgcagttc
ctggtccccatgctgcaagacttccctcctgactgctgggtctccatcagccacatggtg
gcacctgtaggcatgcccgacgtctggctcaccatgctcagcatgatcgtgggtgccacg
tgctacgccatgttcatcggtcatgccaccgccctcatccagtccctggactcctcccgg
cgtcagtaccaggagaagtacaagcaggtggagcagtacatgtccttccacaagttgccg
gctgatacacggcagcgcatccacgagtactatgagcaccgctaccagggcaagatgttc
gatgaggaaagcatcctaggcgagctgagcgaaccacttcgggaggagatcattaacttc
acctgccggggcctggtggcccacatgccgctgtttgcccatgctgaccccagcttcgtc
acagccgtgctcaccaagctacgctttgaggtcttccagccgggggacctcgtggtgcgt
gagggctccgtgggcaggaagatgtacttcatccagcatgggctgctcagtgtgctggca
cgtggcgcccgggacacccgcctcactgacggatcctactttggggagatctgcctgctg
actcggggccgacgcacagccagcgtgcgtgcggacacctactgccgcctgtactcactc
agtgtggaccatttcaacgccgtgctcgaggagttccctatgatgcgccgggcctttgag
acagtggccatggatcggctgcgccgtatcggcaagaagaattccatactgcagcggaag
cgctctgagccaagtccgggcagcagcgggggcgtcatggagcagcacttggttcaacac
gacagggatatggcccggggtgttcagggcctggcgcccagcacaggtgctcggctcagt
ggaaagccggtgctgtgggagccactggtgcacgcacccctgcaagcagccgccgtgacc
tccagtgtggccattgccttgacgcaccagcggggccctcttcccctctcgcccgactct
ccagtcaccctccttgctcgctctgctcgaagatcagcaggagcaggctccccagcgtcc
cccctggtgcctgtccgagctggccctctagcccgggggccttgggcatccacttcccgc
ctgccagccccgcccgcccgaaccctccatgccagcctatcccgggctgggcgctcacag
gtgtcactgctggggcctcccccaggagggggtggacggcgactaggacctcggggccgc
ccgctctcagcctcccaaccttctctgcctcagagggcagcaggtgatggctctcctggg
cgtaagggctcaggaagtgaacgcctgcccccttcggggctcctgaccaagcctccaggg
acagcccagccccccaggctgccagtgcctgagccagctactccccggggcccccagctg
tctgccaacatgtga
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