Bubalus bubalis (water buffalo): 102393371
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Entry
102393371 CDS
T05912
Symbol
SDC3
Name
(RefSeq) syndecan-3 isoform X1
KO
K16337
syndecan 3
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04514
Cell adhesion molecule (CAM) interaction
bbub04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
102393371 (SDC3)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102393371 (SDC3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
bbub00535
]
102393371 (SDC3)
Proteoglycans [BR:
bbub00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
102393371 (SDC3)
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Ortholog
Paralog
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Motif
Pfam:
Syndecan
SDH8
Motif
Other DBs
NCBI-GeneID:
102393371
NCBI-ProteinID:
XP_044793963
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All DBs
Position
2:174707649..174747502
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AA seq
468 aa
AA seq
DB search
MSGGDKSHRETHDEHPRGNDHSLVHPSSGTYFSHHLRWEQRGLQPTVKNPSLGELAAPIW
GHIAAGEEAPGQAQRWRSENFERPVDLEGSGDDDSFPDDELDDLYSGSGSGYFEQESGIE
TAMRFSPDVALAMSTTPAVLPTVDIQPVGTPFEELPSERPTPEPATSPPLVTEVPEEPSQ
RATTVSTPAAPTTATSTGPPMVATVPATVAAAVPSIPAAPPSAATTSAVRTTGVRRLLPL
PLTTAATARATTPAVPSPPTTVAVLDTEAPTPRLVSTTTSRPRALPRPATTQKPDIPEKS
TLPLGTTAPGPTEVAQTPTPESFLTTIRDEPEMPVSGGPSGDFELSEEETTQPDTANEVV
AVGGAAAKPSPPPGTLPKGARPGPGLLDNAIDSGSSAAQLPQKSILERKEVLVAVIVGGV
VGALFAAFLVTLLIYRMKKKDEGSYTLEEPKQASVTYQKPDKQEEFYA
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggcggagataaaagccacagagaaacccacgatgagcacccaaggggaaatgac
cacagcctggtacacccctcatctgggacatacttttcacaccacctgcgctgggagcag
aggggtctgcagcctacagtgaagaatccgagtctgggagagctggcagcgcctatctgg
ggtcacatagctgcgggggaagaagcacctggccaggcccagcgctggcgcagtgagaac
ttcgagaggcccgtggacctcgagggctctggggatgacgactccttccccgatgacgag
ctggacgacctctactctgggtcgggctccggctactttgagcaggaatcgggcattgag
acagccatgcggttcagcccagatgtcgccctggcaatgtccaccacccctgcagtgctg
cccaccgtggacatccagcctgtgggcaccccgtttgaagagctcccctctgagcgcccc
accccggagccagccaccagccccccactggtgacagaggtgccagaagagcccagccag
agagccaccaccgtctccacccctgcggctcccaccaccgccaccagcacagggcccccg
atggtggccacagtgcccgccacagtggccgccgccgtgcccagcatccctgcggcgccc
ccgtctgcggccaccacctctgccgtaaggaccaccggcgtacggaggcttctgcctctg
ccactgaccacagcggccacagcccgggccaccaccccagcggtgccctcacctcccacc
acggtggctgtcttggacacagaggccccaacgcccaggctggtcagcacaactacctcc
aggccaagggcccttcccaggccggctaccacccagaagcctgatatccctgagaagagc
accctgcccctggggaccactgcccctggacccacggaggtggctcagaccccaactcca
gagtccttcctgaccaccatccgggacgagccagagatgccagtgagcgggggacccagt
ggggactttgagctgtcagaggaagagaccacacagccagacacagccaatgaggtggtg
gctgtgggtggggccgcagccaagccgtcacctccgccagggacgctgcccaagggtgcc
cgcccaggccctggcctcctggacaatgccatcgactcaggcagctcggcggctcagctg
ccccagaagagcatcctggagcggaaggaggtgctcgtagctgtgatcgtgggcggggtt
gtaggcgccctctttgctgccttcctggtcaccctgctcatctaccgcatgaagaagaag
gatgagggcagctacacgctggaggagcccaagcaggcgagcgtcacataccagaagcct
gacaagcaagaggagttctacgcctag
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