Bubalus bubalis (water buffalo): 102393431
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Entry
102393431 CDS
T05912
Symbol
CAPN3
Name
(RefSeq) calpain-3 isoform X4
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102393431 (CAPN3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bbub01002
]
102393431 (CAPN3)
Enzymes [BR:
bbub01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
102393431 (CAPN3)
Peptidases and inhibitors [BR:
bbub01002
]
Cysteine peptidases
Family C2: calpain family
102393431 (CAPN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
EF-hand_5
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
102393431
NCBI-ProteinID:
XP_044781101
EnsemblRapid:
ENSBBUG00015014807
LinkDB
All DBs
Position
11:complement(65532744..65585798)
Genome browser
AA seq
729 aa
AA seq
DB search
MPTVISASVAPRTGAEPRSPGPIAQAAQGKGTEAGGGNPSGIYSAIISRNFPIIGVKEKT
FEQLHKKCLEKKVLFVDPEFPPDETSLFYSQKFPIQFVWKRPPEICENPRFIVGGANRTD
ICQGDLGDCWFLAAIACLTLNKRLLFRVIPHDQSFTENYAGIFHFQFWRYGDWVDVVIDD
CLPTYNNQLVFTKSNHRNEFWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVTEFFE
IKDAPRDMYKIMKKAIERGSLMGCSIDTIVPVQFETRMACGLVKGHAYSVTGLEEALYKG
EKVKLVRLRNPWGQVEWNGSWSDSWKDWSYVDKDEKARLQHQVTEDGEFWMSYDDFIYHF
TKLEICNLTADALESDKLQTWTVSVNEGRWVRGCSAGGCRNFPDTFWTNPQYRLKLLEED
DDPDDSEVICSFLVALMQKNRRKDRKLGANLFTIGFAIYEVPKEMHGNKQHLQKDFFLYN
ASKARSRTYINMREVSERFRLPPSEYVIVPSTYEPHQEGEFILRVFSEKRNLSEEVENTI
SVDRPVLEPSNTDQESEEQRQFRNIFRQIAGDDMEICADELKNVLNRVVNKHKDLKTQGF
TLESCRSMIALMDTDGSGRLNLHEFHHLWKKIKTWQKIFKHYDTDQSGTINSYEMRNAVK
DAGFHLNNQLYDIITMRYADKYMNIDFDSFICCFVRLEGMFRAFNAFDKDGDGIIKLNVL
EWLQLTMYA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccgtcattagcgcctccgtggccccacggacaggggctgagcccaggtcccca
gggcccatcgcccaggcagcccagggcaagggcaccgaggcagggggtggaaacccaagt
ggcatctactcagccatcatcagccgcaattttcccattattggggtgaaagagaagaca
ttcgagcagcttcacaagaaatgtctggaaaagaaggttctttttgtggatcctgagttc
ccaccggacgagacctccctgttttacagccaaaagttccccatccagttcgtctggaag
agacctccggaaatttgtgagaatccgcgatttatcgttggtggagccaatagaactgac
atctgccaaggagatctaggggactgctggtttcttgcagccatcgcttgcctgaccttg
aacaagcgtctgcttttccgggtcataccccatgatcagagtttcactgaaaactacgcg
gggatttttcacttccagttctggcgctatggagactgggtggacgtggttattgatgac
tgcctgccaacttacaacaatcaactggttttcaccaaatccaaccatcgcaatgagttc
tggagtgctctgctggagaaggcttatgctaagctccatggttcgtatgaagccctgaaa
ggtgggaacactacagaggccatggaagacttcacgggaggagtgacagagttttttgaa
atcaaggatgctcccagagacatgtacaagatcatgaagaaagccatcgagaggggttcc
ctcatgggctgctccattgatacaattgttccagttcagtttgagacaagaatggcctgt
gggctggtcaaaggccatgcctactcagtcactgggctggaggaggcgctgtacaagggt
gagaaagtgaagctggtgcggctgcggaacccctggggccaggtggagtggaatggctcc
tggagtgacagctggaaggactggagctatgtggacaaggacgagaaggcccgtttgcag
caccaggtcactgaggatggagagttctggatgtcctacgatgattttatctaccatttc
acaaagctggagatctgcaacctcacagctgatgccctggagtccgacaagcttcagact
tggacagtgtccgtgaacgagggccgctgggtgaggggctgctctgccggaggctgccgc
aacttcccagacactttctggaccaacccacagtaccgtctgaagctcctagaggaggac
gacgatcccgatgattccgaggtgatctgtagtttcctggtggctctgatgcagaagaac
cggaggaaggaccggaaactgggggctaacctcttcactatcggtttcgccatctacgag
gttcccaaagagatgcacggcaacaagcagcacctgcagaaggacttctttctgtacaac
gcctccaaggctaggagcagaacctacatcaacatgcgggaggtgtctgagcgcttccgc
ctgcctcccagcgagtacgtcattgtgccctccacttacgagccccaccaggagggcgag
ttcatcctccgggttttctcggaaaagaggaacctctctgaggaagttgagaatacaatc
tccgtggatcggccagtgctagagcccagcaacaccgaccaggaaagtgaggaacagcgg
caattccggaatattttcaggcagatagcaggcgatgacatggagatctgtgcagatgag
ctcaagaatgtccttaacagagttgtgaacaaacataaggacctgaagacacaaggcttc
acgctggagtcctgccgtagcatgatcgctctcatggacacagatggctctggcagactg
aacctgcatgagtttcatcacctctggaagaagattaagacatggcagaaaattttcaaa
cactatgacacagaccaatccggcaccatcaacagctacgagatgcgcaatgcagtcaag
gatgcaggcttccacctcaacaaccagctctacgatatcattaccatgcgctatgcagac
aagtacatgaatatcgacttcgacagtttcatctgctgctttgtcaggctggagggcatg
ttcagagctttcaatgcatttgacaaggatggggacggtatcatcaaactcaatgttctt
gagtggctgcagctcaccatgtatgcctga
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integrated database retrieval system
