Bubalus bubalis (water buffalo): 102393622
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Entry
102393622 CDS
T05912
Symbol
EXOSC4
Name
(RefSeq) exosome complex component RRP41
KO
K11600
exosome complex component RRP41
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102393622 (EXOSC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbub03019
]
102393622 (EXOSC4)
Messenger RNA biogenesis [BR:
bbub03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
102393622 (EXOSC4)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
102393622 (EXOSC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
DUF6276
Motif
Other DBs
NCBI-GeneID:
102393622
NCBI-ProteinID:
XP_006041139
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Position
15:81217414..81219232
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AA seq
245 aa
AA seq
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MAGLELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEIRG
SRARALPDRALVNCQYSSATFSTGERKRRPHGDRKSCEMGLQLRQTFEAAILTQLHPRSQ
IDVYVQVLQADGGTYAACVNAATLAVLDAGIPMRDFVCACSAGFVDGTALADLSHVEEAA
GGPQLALALLPASGQIALLEMDARLHEDHLEQVLEAAARASRDVHTVLDRVVRQHVQEAS
VLLGD
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggctgggctggagctcctatcggaccagggctaccgagtggacgggcggcgcgctggg
gagctgcgcaagatccaggcgcggatgggtgtattcgcgcaggccgacggttcggcctac
atcgaacagggcaacaccaaggcactggcggtggtctacgggcctcacgagatccgaggc
tcccgggcacgagccctgcctgaccgggccctggtaaactgtcagtacagttctgcaacc
ttcagcacgggggaacgcaagcggcggccacacggggaccgcaagtcctgcgagatgggt
ctgcagctgcgtcagaccttcgaggcagccatccttacacagctgcacccacgctcccag
attgacgtctatgtgcaggtgctgcaggcagacggtgggacctatgcagcttgtgtgaat
gcagccacgctggcagtgttggatgcagggatacccatgcgggactttgtgtgtgcctgc
tcagctggctttgtggatggaacagccttggcagacctcagccacgtggaggaagcagct
gggggcccccagctggccctggccttgctaccagcctcaggccagattgcactgcttgag
atggatgccaggctgcatgaggaccacctggagcaggtgctagaggcagctgcccgggct
tcccgggatgtacacaccgtactggaccgtgtggtccggcagcatgtacaagaggcctct
gtcttgctgggggactga
DBGET
integrated database retrieval system
