Bubalus bubalis (water buffalo): 102394012
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Entry
102394012 CDS
T05912
Symbol
MSI1
Name
(RefSeq) RNA-binding protein Musashi homolog 1 isoform X5
KO
K14411
RNA-binding protein Musashi
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102394012 (MSI1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbub03019
]
102394012 (MSI1)
Messenger RNA biogenesis [BR:
bbub03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
102394012 (MSI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
PHM7_cyt
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
102394012
NCBI-ProteinID:
XP_044785994
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All DBs
Position
17:9993803..10019130
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AA seq
313 aa
AA seq
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METDAPQPGLASPDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRS
RGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNT
TVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVE
CKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQATTYASRSYTGLAPGYT
YQFPEFRVERTPLPSAPVLPELTAIPLTAYGPMAAAAAAAAVVRGTGPLDCHSFHQWVPL
KQETGGRSALACS
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggagactgacgcgccccagcccggcctcgcctccccggactcgccgcacgacccctgc
aagatgttcatcgggggactcagttggcagactacgcaggaagggctgcgcgaatacttc
ggccagttcggggaggtgaaggagtgtctggtgatgcgggaccccctgaccaagagatcc
aggggtttcggcttcgtcactttcatggaccaggcgggggtggataaagtcctggcgcag
tcgcggcacgagctcgactccaaaacaattgatcccaaggtggcctttcctcggcgagca
cagcctaagatggtgactcgaacgaagaagatctttgttgggggcctatcagtaaacacc
acagtggaggatgtgaagcagtattttgagcagttcgggaaggtggatgatgccatgctg
atgtttgacaaaaccaccaaccggcaccgagggttcggctttgtcacgtttgagagtgag
gacatcgtggagaaagtgtgtgaaatccacttccacgaaatcaacaacaaaatggtggaa
tgtaagaaagctcagccaaaagaggtgatgtcaccgacgggctcggcccgggggaggtct
cgagtcatgccctacgggatggacgccttcatgctgggcatcggcatgctgggttaccct
ggtttccaagccacgacctatgccagccggagttatacaggcctcgcccccggctacacc
taccagttccccgaattccgtgtagagcggacccctctcccgagcgccccagtcctcccc
gagcttacagccattcccctcaccgcttatggacccatggcagcggcagcagcagcagca
gccgtggttcgagggacagggccccttgattgccacagctttcaccaatgggtaccactg
aagcaggaaacaggtggcaggagcgccctggcctgcagctga
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