Bubalus bubalis (water buffalo): 102395026
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Entry
102395026 CDS
T05912
Symbol
SLIT2
Name
(RefSeq) slit homolog 2 protein isoform X5
KO
K06839
slit 2
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
102395026 (SLIT2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
bbub00536
]
102395026 (SLIT2)
Glycosaminoglycan binding proteins [BR:
bbub00536
]
Heparan sulfate / Heparin
Axon guidance molecules
102395026 (SLIT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_1
Laminin_G_2
LRRNT
LRR_9
LRR_1
LRRCT
hEGF
EGF_TEN
LRR_14
EGF_DL_JAG
JAG1-like_EGF2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
102395026
NCBI-ProteinID:
XP_006063321
LinkDB
All DBs
Position
7:complement(77193389..77596569)
Genome browser
AA seq
1522 aa
AA seq
DB search
MHGVGWQTLSLSLGLVLAILNEVAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERL
DLNGNNITRITKTDFAGLRHLRVLQLMENKITTIERGAFQDLKELERLRLNRNHLQLFPE
LLFLGTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVL
TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS
HLRGHNVAEVQKREFVCSGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLTEIPTNLPE
TITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKI
TELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLR
AIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCSG
TEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLTKIPDHIPQYTAELRLNNNEFTVL
EATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESL
KTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQITTIAPGAFDTLHSLSTLNLLANPFNC
NCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTCDDGNDDNSCSPLSRCP
AECTCLDTVVRCSNKALKVLPKGIPRDVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNR
ISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDL
AALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQ
GPVDVNILAKCNPCLSNPCKNDGTCNNDPVDFYRCTCPYGFKGQDCDVPIHACISNPCKH
GGTCHLKEGEKDGFWCICADGFEGENCEINVDDCEDNDCENNSTCVDGINNYTCLCPPEY
TGELCEEKLDFCAQDLNPCQHDSKCILTPKGYKCDCTPGYIGEHCDIDFDDCQDNKCKNG
AHCTDAVNGYTCTCPEGYSGLFCEFSPPMVLPRTSPCDNFDCQNGAQCIIRINEPICQCL
PGYQGEKCEKLVSVNFVNKESYLQIPSAKVRPQTNITLQIATDEDSGILLYKGDKDHIAV
ELYRGRVRASYDTGSHPASAIYSVETINDGNFHIVELLALDQSLSLSVDGGSPKIITNLS
KQSTLNFDSPLYVGGMPGKNNVAAALRQAPGQNGTSFHGCIRNLYINSELQDFRKVPMQT
GILPGCEPCHKKVCAHGTCQPSSQAGFTCECEEGWTGPLCDQRTNDPCLGNKCVHGTCLP
INAFSYSCKCLEGHGGVLCDEEEDLFNPCQAIKCKHGKCRLSGLGQPYCECSSGYTGDSC
DREISCRGERIRDYYQKQQGYAACQTTKKVSRLECRGGCAGGQCCGPLRSKRRKYSFECT
DGSSFVDEVEKVVKCGCTRCAS
NT seq
4569 nt
NT seq
+upstream
nt +downstream
nt
atgcacggcgtcggctggcagacgctgtccctgtctctggggttagtgctggcgatcctg
aacgaggtggcgccgcaagcgtgtccggcgcagtgctcctgctccgggagcacagtggac
tgtcacgggctggcgttgcgcagtgtgcccaggaatatcccccgcaacaccgagagattg
gatttgaatggaaataacatcacaaggattaccaagacagattttgctggtcttcgacac
ctaagagttcttcagcttatggagaataagattaccaccattgaaagaggagcattccag
gatcttaaagaactggagagactgcgtttaaacagaaatcaccttcagctgtttcctgag
ttgctgtttcttgggacttcgaagctatacaggcttgacctcagtgaaaaccagattcag
gcaattccaaggaaagctttccgtggggcagttgatattaaaaatctgcaactggattac
aaccagatcagctgtattgaagatggggcattcagggctctccgggacctggaagtgctc
actctcaacaataacaacattactagactttctgtggcaagtttcaaccatatgcctaaa
cttaggacttttcgactccattcgaacaacctatattgtgactgccacctggcctggctt
tcggactggctgcgccaaaggcctcgggtgggcctctacactcagtgtatggggccatct
cacctgaggggccacaatgtagctgaggttcaaaaacgagaatttgtctgcagtggtcac
cagtcatttatggctccttcttgcagtgttttgcactgcccagctgcttgtacctgtagc
aacaacatcgtagactgccgtgggaaaggtctcactgagatccccacgaatctgccagag
accatcacagaaatacgtttggaacagaactcaatcaaggtcatccctcctggagctttc
tcaccatataaaaagcttagaagaatcgacctgagcaataatcagatctctgagctagca
ccagatgctttccaaggactacgctctctgaattcacttgtcctctatggaaataaaatc
acagaactcccaaaaagtttatttgaaggactgttttccttacagctactattactgaat
gccaacaagataaactgcctccgggtagatgcttttcaggatctgcacaacctgaacctt
ctctccttatatgacaacaagcttcagaccatcgccaaggggaccttttcacctctccgg
gccattcaaaccatgcatttggcccagaacccctttatttgtgactgccatctcaagtgg
ctggcggattatctccataccaacccaatcgagaccagtggtgcccgctgcaccagtccc
cggcgactggcaaacaaaagaattggacagatcaaaagcaagaaattccgttgttcaggt
acagaagattatcgatcaaaattaagtggggactgctttgccgatttggcttgccctgaa
aagtgccgctgcgaagggaccacagtagactgctccaatcaaaaactcaccaaaatccca
gatcacattccccagtacactgcagagctgcgcctcaacaataatgaatttacagtgttg
gaagctaccgggatcttcaagaaacttcctcagttacgtaaaataaactttagcaacaat
aagatcacagacattgaagagggagcgtttgaaggagcatctggtgtgaatgaaatactt
ctcacgagtaatcgtttggaaaatgttcagcataagatgttcaagggcttggaaagcctc
aagactttgatgttgagaagtaatcgcataagctgtgtagggaatgacagtttcatagga
ctcagctctgtgcgtttgctttctttatatgataatcagattactaccattgcaccagga
gcttttgatactctccattctttatctactctaaacctcttggccaatcctttcaactgt
aactgctacctggcttggttgggagaatggcttaggaagaaaagaattgtaacaggaaat
cctcgatgtcagaaaccctatttcctcaaagaaatccccatccaggatgtggccattcaa
gacttcacttgtgatgatggaaatgatgacaatagctgttccccactctctcgctgtcct
gcggagtgtacctgcttggacacagtggttcgatgtagcaacaaagccttgaaggtcctg
cccaaaggaattccaagagatgtcactgaattgtatctggatgggaaccagtttaccctg
gttcctaaggaactctctaactacaaacatttaacacttatagacttaagtaacaacaga
ataagcaccctctctaatcagagcttcagcaacatgacccagctcctcactttaattctt
agttacaaccgtttgagatgtattcctcctcgaaccttcgatggactgaagtctcttcga
ttactttctttacatggaaacgacatttctgttgtgcctgaaggtgctttcaatgatctt
gctgcattatcacacctagcaattggagccaaccctctttactgtgattgtaacatgcag
tggttatccgactgggtaaagtcggaatacaaagagccgggaattgctcgctgtgctggt
cctggagaaatggcagataaactacttctcacaactccctccaaaaaatttacatgtcaa
ggtcctgtggatgtcaatattctagctaaatgtaatccctgcttatcaaatccatgtaaa
aatgatggcacctgtaacaatgacccagttgacttttatcgctgcacctgtccatatggt
ttcaaggggcaggattgtgatgttccaattcatgcgtgcatcagcaacccatgtaaacat
ggaggaacttgccacttaaaagaaggagaaaaagatggattctggtgtatttgtgctgat
ggatttgaaggagaaaattgtgaaatcaatgttgatgactgtgaagataatgactgtgaa
aataactctacatgtgtcgatggaattaataactacacgtgcctttgcccacctgagtac
acaggagagttgtgtgaggagaaactggacttctgtgcccaggacttgaacccctgccag
catgactccaagtgcatcctgacgccaaagggatacaaatgtgactgcactccaggatac
ataggcgaacattgtgacatcgacttcgatgactgccaagacaacaagtgtaagaacgga
gcccactgcaccgacgcagtgaacggttacacatgcacctgccctgaaggctacagtggc
ttgttttgtgaattttctccacctatggttctccctcgtaccagcccctgtgataatttt
gactgtcagaatggagctcaatgcatcatcaggatcaatgagccaatatgtcagtgtttg
cctggctaccagggagaaaagtgtgaaaaactggtcagtgtgaattttgtaaacaaagag
tcttatcttcagatcccttccgccaaggtccggcctcaaacaaacatcactcttcagatc
gccacagatgaagacagtggaatcctcctgtataagggtgataaagaccatattgctgtg
gagctctaccgagggcgtgttcgtgccagctatgacaccggctcccacccggcttctgcc
atttacagtgtggagacaatcaatgatggaaattttcacattgtggaactactcgccctg
gatcaaagtctctccctctcagtggatggagggagccccaaaatcattaccaacttgtca
aagcagtccactctgaattttgactccccactctatgtcggaggcatgcccgggaagaac
aacgtggccgcagctctgcgccaggcccctgggcagaatggcaccagcttccacggttgc
atccggaacctttacatcaacagcgaacttcaggacttccggaaggtgcccatgcagacc
ggcatccttcctggctgtgaaccatgccacaagaaggtgtgtgcccacggcacatgccag
cccagcagccaggccggcttcacctgcgagtgcgaggaaggatggacagggcccctctgt
gatcagaggaccaatgacccctgtcttggaaataaatgcgtccacggcacctgcctgccc
atcaatgcgttctcctacagctgcaagtgcctagagggccatgggggcgtcctctgtgat
gaagaggaggatctgtttaacccatgccaggcgatcaagtgcaagcatgggaaatgcagg
ctctcaggactggggcagccctactgtgaatgcagcagtggatacaccggggacagctgt
gatcgagaaatctcctgtcgaggggaacggataagagattattaccaaaagcagcagggc
tacgccgcttgccagacgaccaagaaagtgtctcggttggaatgcagagggggctgtgca
ggcgggcagtgctgcggacctctgaggagcaagcgaaggaaatactctttcgaatgcact
gatgggtcttcgtttgtggacgaggtggagaaggtggtaaagtgtggctgtacccgctgc
gcctcctaa
DBGET
integrated database retrieval system
