Bubalus bubalis (water buffalo): 102395026
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Entry
102395026 CDS
T05912
Symbol
SLIT2
Name
(RefSeq) slit homolog 2 protein isoform X5
KO
K06839
slit 2
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04360
Axon guidance
bbub04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
102395026 (SLIT2)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
102395026 (SLIT2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
bbub00536
]
102395026 (SLIT2)
Glycosaminoglycan binding proteins [BR:
bbub00536
]
Heparan sulfate / Heparin
Axon guidance molecules
102395026 (SLIT2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_1
Laminin_G_2
LRRNT
LRR_9
LRR_1
LRRCT
hEGF
EGF_TEN
LRR_14
EGF_DL_JAG
JAG1-like_EGF2
EGF_Teneurin
EGF_TGFA-like
Motif
Other DBs
NCBI-GeneID:
102395026
NCBI-ProteinID:
XP_006063321
LinkDB
All DBs
Position
7:complement(77193389..77596569)
Genome browser
AA seq
1522 aa
AA seq
DB search
MHGVGWQTLSLSLGLVLAILNEVAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERL
DLNGNNITRITKTDFAGLRHLRVLQLMENKITTIERGAFQDLKELERLRLNRNHLQLFPE
LLFLGTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVL
TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS
HLRGHNVAEVQKREFVCSGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLTEIPTNLPE
TITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKI
TELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLR
AIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCSG
TEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLTKIPDHIPQYTAELRLNNNEFTVL
EATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESL
KTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQITTIAPGAFDTLHSLSTLNLLANPFNC
NCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTCDDGNDDNSCSPLSRCP
AECTCLDTVVRCSNKALKVLPKGIPRDVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNR
ISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDL
AALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQ
GPVDVNILAKCNPCLSNPCKNDGTCNNDPVDFYRCTCPYGFKGQDCDVPIHACISNPCKH
GGTCHLKEGEKDGFWCICADGFEGENCEINVDDCEDNDCENNSTCVDGINNYTCLCPPEY
TGELCEEKLDFCAQDLNPCQHDSKCILTPKGYKCDCTPGYIGEHCDIDFDDCQDNKCKNG
AHCTDAVNGYTCTCPEGYSGLFCEFSPPMVLPRTSPCDNFDCQNGAQCIIRINEPICQCL
PGYQGEKCEKLVSVNFVNKESYLQIPSAKVRPQTNITLQIATDEDSGILLYKGDKDHIAV
ELYRGRVRASYDTGSHPASAIYSVETINDGNFHIVELLALDQSLSLSVDGGSPKIITNLS
KQSTLNFDSPLYVGGMPGKNNVAAALRQAPGQNGTSFHGCIRNLYINSELQDFRKVPMQT
GILPGCEPCHKKVCAHGTCQPSSQAGFTCECEEGWTGPLCDQRTNDPCLGNKCVHGTCLP
INAFSYSCKCLEGHGGVLCDEEEDLFNPCQAIKCKHGKCRLSGLGQPYCECSSGYTGDSC
DREISCRGERIRDYYQKQQGYAACQTTKKVSRLECRGGCAGGQCCGPLRSKRRKYSFECT
DGSSFVDEVEKVVKCGCTRCAS
NT seq
4569 nt
NT seq
+upstream
nt +downstream
nt
atgcacggcgtcggctggcagacgctgtccctgtctctggggttagtgctggcgatcctg
aacgaggtggcgccgcaagcgtgtccggcgcagtgctcctgctccgggagcacagtggac
tgtcacgggctggcgttgcgcagtgtgcccaggaatatcccccgcaacaccgagagattg
gatttgaatggaaataacatcacaaggattaccaagacagattttgctggtcttcgacac
ctaagagttcttcagcttatggagaataagattaccaccattgaaagaggagcattccag
gatcttaaagaactggagagactgcgtttaaacagaaatcaccttcagctgtttcctgag
ttgctgtttcttgggacttcgaagctatacaggcttgacctcagtgaaaaccagattcag
gcaattccaaggaaagctttccgtggggcagttgatattaaaaatctgcaactggattac
aaccagatcagctgtattgaagatggggcattcagggctctccgggacctggaagtgctc
actctcaacaataacaacattactagactttctgtggcaagtttcaaccatatgcctaaa
cttaggacttttcgactccattcgaacaacctatattgtgactgccacctggcctggctt
tcggactggctgcgccaaaggcctcgggtgggcctctacactcagtgtatggggccatct
cacctgaggggccacaatgtagctgaggttcaaaaacgagaatttgtctgcagtggtcac
cagtcatttatggctccttcttgcagtgttttgcactgcccagctgcttgtacctgtagc
aacaacatcgtagactgccgtgggaaaggtctcactgagatccccacgaatctgccagag
accatcacagaaatacgtttggaacagaactcaatcaaggtcatccctcctggagctttc
tcaccatataaaaagcttagaagaatcgacctgagcaataatcagatctctgagctagca
ccagatgctttccaaggactacgctctctgaattcacttgtcctctatggaaataaaatc
acagaactcccaaaaagtttatttgaaggactgttttccttacagctactattactgaat
gccaacaagataaactgcctccgggtagatgcttttcaggatctgcacaacctgaacctt
ctctccttatatgacaacaagcttcagaccatcgccaaggggaccttttcacctctccgg
gccattcaaaccatgcatttggcccagaacccctttatttgtgactgccatctcaagtgg
ctggcggattatctccataccaacccaatcgagaccagtggtgcccgctgcaccagtccc
cggcgactggcaaacaaaagaattggacagatcaaaagcaagaaattccgttgttcaggt
acagaagattatcgatcaaaattaagtggggactgctttgccgatttggcttgccctgaa
aagtgccgctgcgaagggaccacagtagactgctccaatcaaaaactcaccaaaatccca
gatcacattccccagtacactgcagagctgcgcctcaacaataatgaatttacagtgttg
gaagctaccgggatcttcaagaaacttcctcagttacgtaaaataaactttagcaacaat
aagatcacagacattgaagagggagcgtttgaaggagcatctggtgtgaatgaaatactt
ctcacgagtaatcgtttggaaaatgttcagcataagatgttcaagggcttggaaagcctc
aagactttgatgttgagaagtaatcgcataagctgtgtagggaatgacagtttcatagga
ctcagctctgtgcgtttgctttctttatatgataatcagattactaccattgcaccagga
gcttttgatactctccattctttatctactctaaacctcttggccaatcctttcaactgt
aactgctacctggcttggttgggagaatggcttaggaagaaaagaattgtaacaggaaat
cctcgatgtcagaaaccctatttcctcaaagaaatccccatccaggatgtggccattcaa
gacttcacttgtgatgatggaaatgatgacaatagctgttccccactctctcgctgtcct
gcggagtgtacctgcttggacacagtggttcgatgtagcaacaaagccttgaaggtcctg
cccaaaggaattccaagagatgtcactgaattgtatctggatgggaaccagtttaccctg
gttcctaaggaactctctaactacaaacatttaacacttatagacttaagtaacaacaga
ataagcaccctctctaatcagagcttcagcaacatgacccagctcctcactttaattctt
agttacaaccgtttgagatgtattcctcctcgaaccttcgatggactgaagtctcttcga
ttactttctttacatggaaacgacatttctgttgtgcctgaaggtgctttcaatgatctt
gctgcattatcacacctagcaattggagccaaccctctttactgtgattgtaacatgcag
tggttatccgactgggtaaagtcggaatacaaagagccgggaattgctcgctgtgctggt
cctggagaaatggcagataaactacttctcacaactccctccaaaaaatttacatgtcaa
ggtcctgtggatgtcaatattctagctaaatgtaatccctgcttatcaaatccatgtaaa
aatgatggcacctgtaacaatgacccagttgacttttatcgctgcacctgtccatatggt
ttcaaggggcaggattgtgatgttccaattcatgcgtgcatcagcaacccatgtaaacat
ggaggaacttgccacttaaaagaaggagaaaaagatggattctggtgtatttgtgctgat
ggatttgaaggagaaaattgtgaaatcaatgttgatgactgtgaagataatgactgtgaa
aataactctacatgtgtcgatggaattaataactacacgtgcctttgcccacctgagtac
acaggagagttgtgtgaggagaaactggacttctgtgcccaggacttgaacccctgccag
catgactccaagtgcatcctgacgccaaagggatacaaatgtgactgcactccaggatac
ataggcgaacattgtgacatcgacttcgatgactgccaagacaacaagtgtaagaacgga
gcccactgcaccgacgcagtgaacggttacacatgcacctgccctgaaggctacagtggc
ttgttttgtgaattttctccacctatggttctccctcgtaccagcccctgtgataatttt
gactgtcagaatggagctcaatgcatcatcaggatcaatgagccaatatgtcagtgtttg
cctggctaccagggagaaaagtgtgaaaaactggtcagtgtgaattttgtaaacaaagag
tcttatcttcagatcccttccgccaaggtccggcctcaaacaaacatcactcttcagatc
gccacagatgaagacagtggaatcctcctgtataagggtgataaagaccatattgctgtg
gagctctaccgagggcgtgttcgtgccagctatgacaccggctcccacccggcttctgcc
atttacagtgtggagacaatcaatgatggaaattttcacattgtggaactactcgccctg
gatcaaagtctctccctctcagtggatggagggagccccaaaatcattaccaacttgtca
aagcagtccactctgaattttgactccccactctatgtcggaggcatgcccgggaagaac
aacgtggccgcagctctgcgccaggcccctgggcagaatggcaccagcttccacggttgc
atccggaacctttacatcaacagcgaacttcaggacttccggaaggtgcccatgcagacc
ggcatccttcctggctgtgaaccatgccacaagaaggtgtgtgcccacggcacatgccag
cccagcagccaggccggcttcacctgcgagtgcgaggaaggatggacagggcccctctgt
gatcagaggaccaatgacccctgtcttggaaataaatgcgtccacggcacctgcctgccc
atcaatgcgttctcctacagctgcaagtgcctagagggccatgggggcgtcctctgtgat
gaagaggaggatctgtttaacccatgccaggcgatcaagtgcaagcatgggaaatgcagg
ctctcaggactggggcagccctactgtgaatgcagcagtggatacaccggggacagctgt
gatcgagaaatctcctgtcgaggggaacggataagagattattaccaaaagcagcagggc
tacgccgcttgccagacgaccaagaaagtgtctcggttggaatgcagagggggctgtgca
ggcgggcagtgctgcggacctctgaggagcaagcgaaggaaatactctttcgaatgcact
gatgggtcttcgtttgtggacgaggtggagaaggtggtaaagtgtggctgtacccgctgc
gcctcctaa
DBGET
integrated database retrieval system
