Bubalus bubalis (water buffalo): 102395338
Help
Entry
102395338 CDS
T05912
Symbol
VPS54
Name
(RefSeq) vacuolar protein sorting-associated protein 54 isoform X2
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bbub01009
]
102395338 (VPS54)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bbub04131
]
102395338 (VPS54)
Protein phosphatases and associated proteins [BR:
bbub01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102395338 (VPS54)
Membrane trafficking [BR:
bbub04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
102395338 (VPS54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
EXOC6_Sec15_N
SBP_bac_6
DCP1
Motif
Other DBs
NCBI-GeneID:
102395338
NCBI-ProteinID:
XP_006064855
LinkDB
All DBs
Position
12:complement(61886851..61988614)
Genome browser
AA seq
965 aa
AA seq
DB search
MASSHSSSPVPQGSSSDVFFKKEVDPTKHIRPVQSLPDVCPKEPTVTDQHRWTIYHSKVN
LPAALNDPRLAKRESDFFTKTWGLDFVDTEVIPSFYLPQISKEHFTVYQQEISQREKIHE
RCKNICPPKDTFDRTLLHTHDKSRTDLEQVPKIFMKPDFALDDSLTFNSVLPWSHFNTAG
GKGNRDAASSKLLQEKLSHYLDIVEVNIAHQISLRSEAFFHAMTSQHELQDYLKKTSQAV
KMLRDKIAQIDKVMCEGSLHILRLALTRNNCVKVYNKLKLMATVHQTQPTVQVLLSTSEF
VGALDLIATTQEVLQQELQGIHSFRHLGSQLCELEKLIDKMMIAEFSTYSHSDLNRPLED
DCQILEEERLISLVFGLLKQRKLNFLEIYSEEMIITAKNIIKQCVINKVSQIEDIDTDVV
LKLADQMRMLNFPQWFDLLTDIFSKFIIFLQRVKATLNIIHSVVLSVLDKNQRTRELEEI
SQQKNAAKDNSLDTEVAYLIHEGMFISDAFSESELTPIAIDTTSQRNASPNSEPCSSDSV
SEPECTTDSSSSKEQISSSVTPGAVDIMVNEDVKLSDLELGKLANNIQELLYSASDICHD
RAVKFLMSRAKDGFLEKLNSTEFISLSRLMETFILETEQICGRKSMSLLGALQSQANKFV
NRFHEERKTKLSLLLDNERWKQADVPAEFQDLVDSISDGKIALPEKKSGATEERKPAEVL
TVEGQQYAVVGTVLLLIRIILEYCQCVDNIPSVTTDMLTRLSDLLKYFNSRSCQLVLGAG
ALQVVGLKTITTKNLALSSRCLQLIVHYIPVIRAHFEARLQPKQYSMLRHFDHITKDYHD
HIAEISAKLVAIMDSLFDKLLSKYEVKAPVPSACFRNICKQMAKMHEAIFDLLPEEQTQM
LFLRINASYKLHLKKQLSHLNVINDGGPQNGLVTADVAFYTGNLQALKGLQDLDLNMAEI
WEQKR
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaagccacagttcttcaccagtgcctcaaggaagcagcagtgatgttttcttt
aaaaaagaggtagacccgacaaaacacattcgacctgtgcagtcactgccagatgtgtgt
cccaaggaacccacagttacagatcaacatagatggactatatatcattccaaagtaaat
ctcccagcagcattaaatgatcctagattagcaaaaagagaatctgacttcttcacaaaa
acatggggattggactttgtggacactgaagtcataccttcattctacctcccacagatc
agcaaggaacattttacagtatatcaacaggaaatctctcagagagaaaagattcatgag
agatgcaagaatatttgtcctcctaaagatacctttgacagaactctcttacatactcat
gataaatccaggacagatctggagcaagtacctaagatttttatgaaaccagattttgcc
ttggacgattccttaacttttaattcagttttaccatggtctcattttaatactgctggt
ggaaaaggaaatcgtgatgcagcttcctcaaagttgctacaagaaaagctgagccattat
ctggatattgtggaagtaaacattgctcaccagatctctttacgttcagaagcatttttt
catgcaatgacctctcaacacgaattgcaggactacctcaagaaaacttcccaggctgta
aaaatgcttcgagataaaattgcacagattgataaagtaatgtgtgaaggatcactacac
attttaagactggcacttaccagaaataattgtgttaaagtatacaataaactgaagtta
atggccactgtacaccagactcagcctacagtacaggtgttgttatctacttctgaattt
gttggagcattggacttaatagcaacaacacaagaggttctacagcaagaacttcagggc
attcatagcttccggcatttgggatcacagctttgtgaattagaaaaactgatagataaa
atgatgattgcagaattttctacttattctcacagtgacttaaatagaccattggaagat
gactgtcaaattttagaagaggaaagactaatctctcttgtatttggacttttaaaacaa
agaaaacttaattttttagaaatatatagtgaagaaatgattattacagcaaagaatatc
attaaacagtgtgtgattaataaagtttcacaaatagaagatatagacacagatgttgtt
ttgaagcttgcagatcagatgagaatgttgaattttcctcagtggtttgatttactaacg
gatattttctccaagtttataattttcctacagagagttaaggcaaccttaaatatcatt
catagtgttgttctctcagttcttgacaaaaaccaaaggactagagaattggaagagatt
tcacaacagaaaaatgctgcaaaagataattcactagacacagaagtggcttatttaatc
catgaaggcatgtttataagtgatgcatttagtgagagtgaattaacacctatagccata
gatactacctctcaaagaaatgcatctccaaatagtgagccctgcagcagtgattctgta
tccgaaccagaatgtactactgattcttcatccagcaaagagcagatatcatcatctgtt
actccaggagctgtggatattatggtcaatgaagatgtgaaattaagtgacttagagcta
ggaaagctggcaaataatatccaggagttattatatagtgcctcagatatatgccatgat
cgagccgtcaaatttctcatgtcaagagcaaaggatggttttcttgagaagctaaattcc
acggaattcatatcactttccagattaatggaaacattcattttagagactgaacagata
tgtggaagaaaaagcatgtcattacttggagcacttcagagccaagcaaataaatttgta
aataggtttcatgaagagagaaaaaccaaactcagccttctcttagacaatgaacgctgg
aagcaagctgatgttcctgcagaatttcaggatcttgttgattctatatcagatggaaag
attgctttacctgaaaaaaaatcaggggctacagaagaaagaaaaccagctgaagttctt
actgttgaggggcaacagtatgctgttgttggaactgtattgctgttgataagaattatc
cttgaatattgccagtgtgtggataatatcccatctgttactactgacatgctcactcgt
ctgtcagacttattgaagtacttcaattcaagaagttgccagttagttcttggagctggt
gcactgcaagttgttggactaaaaacaataactacaaaaaatttggctctttcttcacgc
tgtttgcagttaattgtgcactacattcctgtgatccgggctcattttgaagctcgactg
caacctaagcaatacagtatgcttaggcattttgatcatatcactaaggactaccatgac
cacatagctgaaatatcagctaagcttgtagcgataatggatagcttatttgacaagctg
ttatctaagtatgaagtgaaagctcccgttccttctgcctgtttcaggaatatttgtaag
caaatggcaaaaatgcatgaagctatatttgatctccttcctgaagaacaaacgcaaatg
ttatttttaagaattaatgcaagttacaaactccacttgaaaaagcagttatctcactta
aatgtgataaatgatggaggacctcaaaatgggttggtcacagcagatgtagctttttac
actggaaatcttcaagccttaaaaggccttcaagatttggacctaaatatggccgagatc
tgggaacagaaaaggtga
DBGET
integrated database retrieval system
