Bubalus bubalis (water buffalo): 102395394
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Entry
102395394 CDS
T05912
Symbol
COPB1
Name
(RefSeq) coatomer subunit beta
KO
K17301
coatomer subunit beta
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bbub04131
]
102395394 (COPB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bbub04147
]
102395394 (COPB1)
Membrane trafficking [BR:
bbub04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
102395394 (COPB1)
Exosome [BR:
bbub04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
102395394 (COPB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
HEAT_2
HEAT
Cnd1
HEAT_EZ
Arm
MMS19_N
AP4E_app_platf
Motif
Other DBs
NCBI-GeneID:
102395394
NCBI-ProteinID:
XP_044785501
LinkDB
All DBs
Position
16:complement(47162509..47197450)
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AA seq
953 aa
AA seq
DB search
MTAAENVCYTLINVPMDSEPPSEISLKNDLEKGDVKSKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPS
ERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLI
VLDRLIELKEHPAHERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVL
KKEVIKTNNVSEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDSNEAAAADV
LEFVREAIQRFDNLRMLIVEKMLEVFHAIKSVKIYRGALWILGEYCSTKEDIQSVMTEVR
RSLGEIPIVESEIKKEAGELKPEEEITVGPVQKLVTEMGTYATQSALSSSRPTKKEEERP
PLRGFLLDGDFFVAASLATTLTKIALRYVALVQEKKKQNSFVAEAMLLMATILHLGKSSL
PKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRQSLSHMLSAKLEEEKLSQKKESEK
RNVTVQPDDPISFMQLTAKNEMNCKEDQFQLSLLAAMGNTQRKEATDPLASKLNKVTQLT
GFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVEKPSPLTLAPH
DFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYIQPATCTDAEF
RQMWAEFEWENKVTVNTNIVDLNDYLQHILKSTNMKCLTPEKALSGYCGFMAANLYARSI
FGEDALANVSIEKPIQQGPEAPVTGHIRIRAKSQGMALSLGDKINLSQKKNSI
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgacggctgccgagaacgtctgctatacgttaattaacgtgccaatggattcagaacca
ccgtctgaaattagcttaaaaaatgatctagaaaaaggagatgtgaagtcaaagactgaa
gctttaaagaaagtaatcattatgattctgaatggtgaaaaacttcctggacttctgatg
accatcattcgctttgtgctgcctcttcaggatcataccatcaaaaaattacttctggta
ttttgggaaattgttcctaaaacaactccagatgggaggcttttacatgaaatgatcctt
gtttgtgatgcatatagaaaggatcttcagcatcctaatgaatttattcgaggatctact
cttcgttttctttgcaagttgaaagaggcagaattactggaacctttaatgccagctatc
cgtgcttgtttggagcatcgacacagctatgttagaagaaatgctgttttggccatctat
actatctatagaaactttgaacatcttataccagatgctcctgaattgatacatgatttc
ctggtgaatgagaaggatgcaagttgcaaaagaaatgcatttatgatgctaattcatgca
gatcaggatcgagctttggattacctaagtacttgtattgatcaagttcagacatttgga
gatattcttcagttggttattgttgaactaatttataaggtctgtcatgctaatccatca
gaaagggctcgtttcattcgctgcatctataacttactacagtcatctagccctgctgtg
aaatacgaagctgctggaacattagtaacactctctagtgcacctactgccatcaaggct
gctgctcagtgttacattgacttaattattaaggagagtgacaacaatgtaaagcttata
gttctagatcgattgatagaattaaaagaacatcctgctcatgaacgagtactacaggat
ctggttatggacatcctaagagttttgagcacaccagacttagaagtacgcaagaagact
ctgcagttagcactggatcttgtctcctctaggaatgttgaagagctggttattgtcctt
aagaaggaagtaattaaaacaaataatgtgtcagagcatgaagatactgacaaatacaga
caactccttgtgcgaacattgcattcctgttctgtccgatttccggatatggctgcaaat
gttattcctgtgttaatggaatttctcagtgacagtaatgaagcagcagctgcagatgtc
ttggagtttgttcgtgaagccattcagcgctttgataacctgagaatgcttattgttgag
aagatgcttgaagtctttcatgctatcaaatctgtcaagatttaccgaggagcattgtgg
atcctgggagaatactgtagtaccaaggaagacattcagagtgtgatgactgaggtccgc
aggtcccttggggagatcccaattgtagagtcagagattaaaaaagaagctggtgaatta
aaacctgaagaagaaataactgtgggaccagttcagaaattggtaactgagatgggcacc
tatgcaactcagagtgcccttagcagttctagaccaaccaagaaagaggaagaaagacct
cccctaagaggattccttctggatggagatttctttgttgctgcctcccttgccacaact
ctgaccaagattgccttgcgctatgtggctttggttcaggagaagaaaaagcaaaattct
tttgttgctgaagcaatgttgctcatggccactatcctacatttgggaaaatcctctctt
cctaagaagccgattacagacgatgatgtagatcgaatctccttgtgcctcaaggtcttg
tctgaatgttcacctttaatgaatgacattttcaataaggaatgcagacagtccctttct
cacatgttatctgctaaacttgaagaagaaaaattatcccaaaagaaagaatctgaaaag
aggaatgtgacagtacagcctgatgaccccatttccttcatgcaactaactgcaaagaat
gaaatgaactgcaaggaagatcagtttcagctgagtttgctggcagcaatgggtaacacc
cagagaaaagaagccacagatcccctagcatctaaacttaacaaggttacccagttgaca
ggtttctcagaccctgtgtatgcagaagcctatgttcatgtcaaccagtatgacatcgtc
ctggatgtacttgttgtgaaccaaaccagtgacaccttgcagaactgcacgttagaatta
gctactctgggggacttgaaacttgtggaaaagccatctcctttgactcttgctcctcat
gattttgcaaatattaaagctaatgtcaaagtagcatcaacagaaaatggaataattttt
ggtaatatagtttatgatgtctctggagcagcaagtgacagaaactgtgtggtcctcagt
gatattcacattgacatcatggactatatccagcctgcaacttgcactgatgccgaattc
cgtcagatgtgggctgaatttgaatgggaaaacaaagtgacagttaacacaaatatagtt
gatttaaacgactatttacagcacatattaaagtcaaccaacatgaaatgcctcactcca
gagaaggcactttctggttactgtggctttatggcagccaacctctatgctcgttccata
tttggagaagatgcacttgcaaacgttagcattgaaaagccgatacaacagggaccagag
gcccctgttactggccacataagaatccgtgcaaagagtcagggaatggccttaagtctt
ggagataaaatcaacttgtctcagaagaaaaatagtatataa
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