Bubalus bubalis (water buffalo): 102395660
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Entry
102395660 CDS
T05912
Symbol
CACNA1B
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B isoform X1
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04010
MAPK signaling pathway
bbub04020
Calcium signaling pathway
bbub04721
Synaptic vesicle cycle
bbub04723
Retrograde endocannabinoid signaling
bbub04725
Cholinergic synapse
bbub04726
Serotonergic synapse
bbub04727
GABAergic synapse
bbub04728
Dopaminergic synapse
bbub04930
Type II diabetes mellitus
bbub05016
Huntington disease
bbub05020
Prion disease
bbub05022
Pathways of neurodegeneration - multiple diseases
bbub05032
Morphine addiction
bbub05033
Nicotine addiction
bbub05207
Chemical carcinogenesis - receptor activation
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102395660 (CACNA1B)
04020 Calcium signaling pathway
102395660 (CACNA1B)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
102395660 (CACNA1B)
04725 Cholinergic synapse
102395660 (CACNA1B)
04728 Dopaminergic synapse
102395660 (CACNA1B)
04726 Serotonergic synapse
102395660 (CACNA1B)
04723 Retrograde endocannabinoid signaling
102395660 (CACNA1B)
04721 Synaptic vesicle cycle
102395660 (CACNA1B)
09160 Human Diseases
09161 Cancer: overview
05207 Chemical carcinogenesis - receptor activation
102395660 (CACNA1B)
09164 Neurodegenerative disease
05016 Huntington disease
102395660 (CACNA1B)
05020 Prion disease
102395660 (CACNA1B)
05022 Pathways of neurodegeneration - multiple diseases
102395660 (CACNA1B)
09165 Substance dependence
05032 Morphine addiction
102395660 (CACNA1B)
05033 Nicotine addiction
102395660 (CACNA1B)
09167 Endocrine and metabolic disease
04930 Type II diabetes mellitus
102395660 (CACNA1B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bbub04040
]
102395660 (CACNA1B)
Ion channels [BR:
bbub04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
102395660 (CACNA1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
102395660
NCBI-ProteinID:
XP_025117860
LinkDB
All DBs
Position
12:106121880..106333891
Genome browser
AA seq
2334 aa
AA seq
DB search
MVRFGDELGGRYGGPGGGERARGGGAGVAGGPGPGGLQPGQRVLYKQSIAQRARTMALYN
PIPVKQNCFTVNRSLFVFSEDNVVRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPD
GDKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFVLHKGSYLRNGWNVMDFVVVLTGILA
TAGTDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAII
GLEFYMGKFHKACFPNSTDADPVGDFPCGREAPARLCEGDTECREYWAGPNFGITNFDNI
LFAILTVFQCITMEGWTDILYNTNDAAGNTWNWLYFLPLIIIGSFFMLNLVLGVLSGEFA
KERERVENRRAFLKLRRQQQIERELNGYLEWIFKAEEVMLAEEDKNAEEKSPLDAVLKRA
ATKKSRNDLIHAEEGEDRFADLCAVGSPFARASLKSGKTESSSYFRRKEKMFRFFIRRLV
KAQSFYWAVLCVVALNTLCAAVVHYQQPQRLTAALYFAEFVFLGLFLTEMSLKMYGLGPR
SYFRSSFNCFDFGVIVGSIFEVVWAAIKPGTSFGISVLRALRLLRIFKVTKYWSSLRNLV
VSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFQDETPTTNFDTFPAAILTVFQI
LTGEDWNAVMYHGIESQGGVSKGMFSSVYFIVLTLFGNYTLLNVFLAIAVDNLANAQELT
KDEEEMEEAANQKLALQKAKEVAEVSPMSAANISIAARQQNSAKARSVWEQRASQLRLQN
LRASCEALYSEMDPEERLRFATSRHLRPDMKTHLDRPLVVEPGRDGARGPAGGKARPEGG
EAGEGADPPRRHHRHRDRDRDKAAAPAGEPDRADAPKAEGGDPGAREERARPRRSRSKEA
TGPREARSERGRGLGPDGGRRHHRRGSPEEAAEREPRRHRAHRHAPEPSREGAPGSKGER
RARHRGGSRAGPREAESGEEPSRRHRARHKAPPAHEEAEKEAEAEDRDKEPRNHQPRESH
CDLEASVVIGVGPVHALPSTCLEKVEEQPEDADNQRNVTRMGSQPSDLSTAVHIPVTLTG
PPGETTVVPSGNVDLESQAEGKKEVEADDVMRSGPRPIVPYSSMFCLSPTNLLRRFCHYI
VTMRYFEMVILVVIALSSIALAAEDPVQTDSPRNNVLKYMDYIFTGVFTFEMVIKMIDLG
LLLHPGAYFRDLWNILDFIVVSGALVAFAFSGSKGKDISTIKSLRVLRVLRPLKTIKRLP
KLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGKFFYCTDESKELERDCRGQY
LDYEKEEVEAQPRQWKKYDFHYDNVLWALLTLFTVSTGEGWPMVLKHSVDATYEEQGPSP
GYRMELSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKVMSECSLEKNERACIDFAISA
KPLTRYMPQNKQSFQYKTWTFVVSPPFEYFIMAMIALNTVVLMMKFYDAPYEYELMLKCL
NIVFTSMFSMECVLKIIAFGVLNYFRDAWNVFDFVTVLGSITDILVTEIAETNNFINLSF
LRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIAL
DDDTSINRHNNFRTFLQALMLLFRSATGEAWHEIMLSCLSSRACDELANATECGSDFAYF
YFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFIRVWAEYDPAACGRISY
NDMFEMLKHMSPPLGLGKKCPARVAYKRLVRMNMPISNDDMTVHFTSTLMALIRTALEIK
LAPAGTKQHQCDAELRKEISSVWANLPQKTLDLLVPPHKPDEMTVGKVYAALMIFDFYKQ
NKTTRDQIHHAPGGLAQMGPVSLFHPLKATLEQTQPAVLRGARVFLRQKSSASLSNGGAV
QTQEGGIKESVSWGTQRTQEVPCEVRTPLERGHSTEIPVQTGKPAVDVQMQSMVLRGPDG
EPQPGLESQGRAASMPRLAAETQPHPDASPMKRSISTLAPQRPHVAHLCNAALDRAPASQ
AAPHHHHRCHRRRDRKQKSLEKGPGLSADTDGAPYSTTGPGPPPPPGDGAAGCRRERRQE
RGRSQERRQPSSSSSEKQRFYSCDRFGGREPPQPKPSLSSHPTSPTAGQEPGPLRQGSGS
VNGSPLLSTSGASTPGRGGRRQLPQTPLTPRPSITYKTANSSPVHFAGAQTSLPAFSPGR
LSRGLSEHNALLQRDPLSQPLAPSSRIGSDPYLGQRLDSEAAARTQLEDTLTFEEAVATN
SGRSSRTSYVSSLTSQSHPLRRVPNGYHCTLGLSSGGGGRGRPSYHRPDQDHWC
NT seq
7005 nt
NT seq
+upstream
nt +downstream
nt
atggtccgcttcggggacgagctgggcggccgctatgggggccccggcggcggggagcgg
gcgcggggcggcggggccggcgttgcgggcggcccgggccccggggggctgcagccgggc
cagcgggtcctctacaagcagtcgatcgcgcagcgcgcgcggaccatggcgctgtacaac
cccatcccggtcaagcagaactgcttcaccgtcaaccgctcgctcttcgtcttcagcgag
gacaacgtcgtccgcaaatacgccaagcgcatcaccgagtggcctccgtttgagtacatg
attctggccaccatcatcgccaactgtatcgtgctggctctggagcagcacctcccagac
ggagacaagacgcccatgtctgagcggctggacgacacggagccctacttcatcggcatc
ttctgcttcgaggctgggatcaagatcatcgcgctgggctttgtcttgcacaagggctcc
tacctgcggaatggctggaacgtcatggacttcgtggtggtcctcacggggatcctcgcc
acagctggcactgactttgacctgcgaacgctgcgggctgtgcgtgtgctgaggcccctg
aagctggtgtctgggattccaagtttgcaggtggtgctcaagtccatcatgaaggccatg
gttccgctcctgcagattgggctgcttctctttttcgccatcctcatgttcgccatcatt
ggcctcgagttctacatgggcaaattccacaaggcttgtttccccaacagcacagacgca
gatccggtgggtgacttcccgtgcggcagggaggccccggcgcggctgtgcgagggcgac
actgagtgccgggagtactgggcgggccccaacttcggcatcaccaacttcgacaacatc
ctgttcgccatcctgacggtgttccagtgcatcaccatggagggctggactgacatcctc
tacaacaccaacgacgcggctggcaacacctggaactggctctacttcctgcccctgatt
atcatcggctcgttcttcatgctcaacctggtgctgggcgtgctctcaggagagtttgcc
aaggagcgtgagcgggtggagaaccgccgggcctttctgaagctccgccggcagcagcag
atcgagcgggagctcaatgggtacctggagtggatcttcaaggccgaggaggtcatgctg
gctgaggaggacaagaacgcggaggagaagtcccctctggatgcagtgttgaagagagca
gccaccaagaagagccgaaacgacctgatccacgcggaggagggagaggaccgctttgca
gacctgtgtgctgtggggtcccccttcgcccgagccagcctcaagagtgggaagacggag
agctcgtcatacttccgcaggaaggagaagatgttccggttcttcatccggcgcctggtg
aaggctcagagcttctactgggcggtgctgtgtgtggtggccctgaacacactgtgcgcg
gccgtggtgcactaccagcagccccagcggctcaccgcggccctgtactttgcagagttt
gttttcctgggtctcttcctcacagagatgtccctgaagatgtatggcctggggcccagg
agctacttccggtcctccttcaactgctttgattttggggtcattgtggggagcattttc
gaagtggtctgggcggccatcaagccaggaacctccttcggcatcagtgtgctgcgggcg
ctgcggctgctgaggatcttcaaagtcaccaagtactggagctccctgcggaacctggtg
gtgtccctgctcaactccatgaagtccatcatcagcctgctcttcctgctcttcctcttc
atcgtggtcttcgctctgctgggcatgcagctctttgggggacagttcaacttccaggat
gagactccgacaaccaactttgacaccttccctgccgccatcctcactgtcttccagatc
ctgaccggggaggactggaatgcggtgatgtaccatgggatcgagtcacaaggtggagtc
agcaagggcatgttctcgtccgtgtacttcattgtcttgacgctgtttgggaactacacc
ctgctgaacgtcttcctggccatcgctgtggacaacctcgccaatgctcaggagctgacc
aaggatgaagaggagatggaagaagcagccaatcagaagcttgctctgcaaaaggccaaa
gaagtggctgaagtcagccccatgtctgctgcgaacatctccattgccgccaggcagcag
aactcggccaaggcgcgctcggtgtgggagcagcgggccagccagctgcggctgcagaac
ctgcgggccagctgtgaagcgctgtatagcgagatggaccccgaggagcgcctgcgcttc
gccacttcccgccacctgcggcccgacatgaagacgcacctggaccggccgcttgtggtg
gagccaggccgggatggcgcgcgggggcctgcggggggcaaggcccggcccgagggcggg
gaggccggcgagggtgccgacccgccgcgcaggcaccaccggcaccgcgacagggacagg
gacaaggccgcagccccggcgggggagccggacagggcggacgccccgaaggcggagggc
ggggacccgggggctcgggaggagcgggcgcgaccgcgccgcagccgcagcaaggaggcc
acaggcccccgcgaggccaggagcgagcgaggccgcgggctgggcccggacggcggccgg
cgccaccaccggcggggctccccggaggaggctgcggagcgcgagccccggcgccaccgc
gcgcaccggcacgcgccggagccgagcagggagggcgcgcccgggagcaagggcgagcgg
cgagcgcggcaccgcggcggctcccgggccggcccccgggaggccgagagcggcgaggag
ccctcccggcggcaccgagcgcgacacaaggcgccgcccgcacacgaggaggcggagaag
gaggccgaggcggaggacagggacaaggagccccgaaaccaccagcccagggagtcgcac
tgtgacctggaggccagtgtggtcattggtgtgggccctgtgcatgccctgcccagcact
tgtctagagaaggtggaagagcagccagaggatgcagacaatcagcggaatgtgactcgc
atgggcagtcagccctcagatctgagcaccgctgtgcatatcccagtgacgctgaccggg
cctcccggggagaccacggttgttcccagtggtaacgtggacctggaaagccaagcagaa
ggaaagaaggaggtggaagctgatgacgtgatgaggagcggcccccgacccattgtcccg
tacagctccatgttctgcttgagccccaccaacctgctccgccgcttctgccactacatt
gtgaccatgcggtacttcgagatggtcattctcgtggtcattgccctgagtagcatagcc
ctggccgctgaggatcctgtgcagacagactcgcccaggaacaacgtgctgaagtacatg
gactacatcttcacaggtgtcttcacctttgagatggtgataaagatgatcgatttggga
ctgctgctgcaccctggtgcctacttccgggatctgtggaacattctggacttcattgtg
gtcagtggggccctggtggcgtttgccttctcaggctccaaagggaaagacatcagcacc
atcaagtccctgagggtcctgcgtgtgctgaggccactcaagaccatcaagcggctgccc
aagctcaaagctgtgtttgactgtgtggtgaactccctgaagaacgtcctcaacatcctg
atcgtctacatgctcttcatgttcatatttgctgtcatcgcggtacagctcttcaagggg
aagtttttctactgcaccgatgagtccaaggagctggagcgggactgcaggggccagtat
ttggactacgagaaggaggaggtggaagctcagccgcggcagtggaagaaatacgacttc
cactatgacaacgtgctctgggccctgctaacgctgttcactgtgtccacaggcgaaggg
tggcccatggtgctgaaacactcggtggatgccacctacgaggagcagggcccaagccct
gggtaccgcatggagctgtccattttctatgtggtctacttcgtggtcttccccttcttc
tttgtaaacatctttgtggccttgatcatcatcaccttccaggagcagggggacaaagtc
atgtctgagtgcagcttggagaagaatgagagggcttgtatcgacttcgccattagcgcc
aaacccctgacgcggtacatgccccagaacaagcagtcgttccagtacaagacgtggacg
ttcgtggtctcaccaccctttgaatatttcatcatggccatgatagccctcaacacagtg
gtgctgatgatgaagttctacgatgcgccctacgagtacgagctgatgttgaagtgtctg
aacatcgtgttcacgtccatgttctccatggaatgtgtgctcaagatcatcgcctttgga
gtgctgaactatttcagagacgcctggaatgtctttgactttgtcactgtgttgggaagt
attactgatattttagtaacagagattgcggaaacgaacaacttcatcaacctcagcttc
ctccgcctcttccgtgctgcccgactcatcaagctgctccgccaaggctacaccatccgc
atcctgctgtggaccttcgtccagtccttcaaggccctgccctatgtgtgcctgctcatc
gccatgctgttcttcatctacgccatcatcggcatgcaggtgtttggaaacatcgctctg
gatgacgacaccagcatcaaccggcacaacaacttccggacgttcctccaggccttgatg
ctgctcttcaggagtgccaccggggaggcctggcatgagatcatgctgtcctgcctcagc
agtcgggcctgtgacgagctcgccaatgccacggagtgtgggagtgacttcgcctacttc
tactttgtctccttcatcttcctttgctcctttctgatgttgaacctctttgtggctgtg
atcatggacaattttgagtaccttacgcgggactcttccatcctagggcctcaccacctg
gacgaattcatccgggtctgggctgagtacgacccggctgcgtgtgggcgcatcagttac
aatgacatgtttgagatgctgaaacacatgtccccacccctggggctggggaagaaatgc
cctgctcgtgttgcgtacaagcgcctggttcgtatgaacatgcccatctccaatgacgac
atgaccgtccacttcacatccacgctgatggccctcatccggactgcattggagatcaag
ctggctccagctggtacaaagcagcatcagtgtgacgcagagctgaggaaggagatctcc
tccgtgtgggccaatctgccccagaagaccctggacttactggtgccaccccataaaccc
gacgagatgacggtggggaaggtgtatgcagctctgatgatattcgacttctacaaacag
aacaaaaccaccagagaccagattcaccacgctcctggaggcctggcccagatgggcccc
gtgtccctgttccaccccctgaaggccacgctggagcagactcagccggctgtgctccga
ggagcccgcgttttccttcggcagaagagctcggcctccctcagcaacggtggggcggta
caaacccaagagggtggcatcaaggagtctgtctcctggggcactcagaggacccaggag
gtcccctgcgaggtgaggacacccctggagcgtggccactccacagagatcccggtgcag
acaggaaaaccggctgtggatgtccagatgcagagcatggtcctgagaggccctgacggg
gaaccccaacctgggctggagagccagggccgagcggcctccatgccccgcctggcagca
gagactcagccacacccagatgccagccccatgaagcgctccatctccacactggcaccc
cagaggccccacgtggctcatctgtgcaacgcggccctggaccgcgctccagccagccag
gccgccccccaccaccaccaccgctgccatcgccgcagggaccggaagcagaagtccctg
gagaaggggcccggcctgtctgcagacacagatggcgcgccctacagcaccacggggccg
ggccccccaccgcccccaggggatggggcagcaggctgccggcgggagcgcaggcaggag
cggggccggtcccaggagcgaaggcagccctcctcctcttcctctgagaagcagcgcttc
tactcctgtgaccgctttgggggccgtgagcccccacagcccaagccctctctcagcagc
catcccacgtcgcccacggctgggcaggagccaggacccctgagacagggtagcggctca
gtgaacgggagccccctgctgtcgacatctggtgctagcacccctggccgcggcgggcgg
aggcagctcccccagaccccgctgaccccccgtcccagcatcacctataagacggccaat
tcctcacctgtccactttgccggggctcagaccagcctccctgccttttcccccggccgg
cttagccgtggcctttcggaacacaacgccctgctccagagagaccccctcagccagccc
ctggcccccagctctcggattggctccgacccttacctggggcagcgtctggacagcgag
gctgcggcccgcacccagcttgaggacacgctcaccttcgaggaggccgtggccaccaac
tcgggccgctcctcccggacttcctacgtgtcctccctgacctcgcagtcccaccccctc
cgccgggtgcccaacggctaccactgcactctggggctcagctcgggcgggggcggccgg
gggcggcccagctaccaccgccctgaccaagaccactggtgctag
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integrated database retrieval system