Bubalus bubalis (water buffalo): 102395793
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Entry
102395793 CDS
T05912
Symbol
VPS4A
Name
(RefSeq) vacuolar protein sorting-associated protein 4A isoform X1
KO
K12196
vacuolar protein-sorting-associated protein 4
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03250
Viral life cycle - HIV-1
bbub03272
Virion - Hepatitis viruses
bbub04144
Endocytosis
bbub04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
102395793 (VPS4A)
03272 Virion - Hepatitis viruses
102395793 (VPS4A)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102395793 (VPS4A)
09143 Cell growth and death
04217 Necroptosis
102395793 (VPS4A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bbub04131
]
102395793 (VPS4A)
03400 DNA repair and recombination proteins [BR:
bbub03400
]
102395793 (VPS4A)
Membrane trafficking [BR:
bbub04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
102395793 (VPS4A)
DNA repair and recombination proteins [BR:
bbub03400
]
Eukaryotic type
Check point factors
Other check point factors
102395793 (VPS4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Vps4_C
MIT
AAA_lid_3
TIP49
AAA_16
AAA_22
AAA_14
AAA_5
AAA_25
RuvB_N
IstB_IS21
AAA_17
DUF815
AAA_2
AAA_18
AAA_33
nSTAND_NTPase5
NPHP3_N
nSTAND3
RNA_helicase
PhoH
AAA_24
ResIII
YhdB
AAA_28
Mg_chelatase
AAA_7
NACHT
Parvo_NS1
bpMoxR
ABC_tran
Sigma54_activat
AAA_30
PglZ_2nd
TPR_2
Motif
Other DBs
NCBI-GeneID:
102395793
NCBI-ProteinID:
XP_025124730
LinkDB
All DBs
Position
18:36041053..36054896
Genome browser
AA seq
437 aa
AA seq
DB search
MTTSTLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAKC
MQYLDRAEKLKDYLRNKEKHGKKPVKENQSESKGSDSDSEGDNPEKKKLQEQLMGAVVME
KPNIRWNDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAV
ATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNENE
SEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRRRFEKRIYIPLPEEAARA
QMFRLHLGSTPHNLTEANIHELARKTEGYSGADISVIVRDSLMQPVRKVQSATHFKKVCG
PSRTNPSVMIDDLLTPCSPGDPGAIEMTWMDVPGDKLLEPVVCMSDMLRSLATTRPTVNA
EDLMKVKKFSEDFGQES
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgtcaaccctccagaaagccattgatctggtgacaaaagccacagaagaggat
aaagccaagaattacgaggaggcgctccggctctaccagcatgccgtggagtacttcctg
cacgctatcaaatatgaagcacacagtgacaaagccaaggagagcattcgagccaagtgc
atgcagtacctggaccgggcggagaagctgaaggattacttacgaaacaaagagaagcat
ggcaagaagccagtcaaagagaatcaaagcgagagtaagggcagtgatagtgacagtgaa
ggggataatccagagaaaaagaaattgcaagagcagctgatgggtgccgtcgtgatggag
aagcccaacatccggtggaatgatgtggctgggctggagggagccaaggaggccctcaaa
gaagctgtcattttgccaattaaattcccgcacttgttcacaggcaagcgcaccccttgg
cgggggatactgctctttggaccacccggcacagggaaatcctacctggccaaagcagtg
gcaacggaggccaacaactccaccttcttctctgtgtcctcctcagacttgatgtctaag
tggctgggggagagcgagaagctagtcaagaacctgtttgagctggcccgccagcacaag
ccctccatcatcttcatcgacgaggtggattcactctgtggatcccgcaacgagaatgag
agcgaggctgcccgcaggatcaaaaccgagttcctagtccagatgcagggggtggggaac
aacaatgatgggactctggtgctaggtgccacaaacatcccgtgggtgttggactcggcc
attagaaggaggtttgaaaagcgaatttatatcccattgccggaggaggccgcccgtgcc
cagatgttccgattgcatctggggagcactcctcacaacctcacagaggccaacatccat
gagctggcccggaagacagaaggctactcgggtgcagacatcagcgtcattgtgcgggac
tccctcatgcagcccgtgaggaaagtgcagtcggcaacacacttcaaaaaggtctgtggc
ccttcccgcaccaaccctagcgttatgattgatgacctcctgaccccatgctcaccggga
gacccaggggccatagagatgacttggatggacgtccctggtgacaaactcctagagcct
gtggtttgcatgtcggacatgctccggtctttggccaccactcggcccactgtgaatgca
gaagacctcatgaaagtgaagaaattctcagaggactttggacaggagagttaa
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