Bubalus bubalis (water buffalo): 102395905
Help
Entry
102395905 CDS
T05912
Symbol
SMG7
Name
(RefSeq) protein SMG7 isoform X3
KO
K14409
protein SMG7
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102395905 (SMG7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbub03019
]
102395905 (SMG7)
Messenger RNA biogenesis [BR:
bbub03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
102395905 (SMG7)
mRNA cycle factors
Common to processing body (P body) and stress granule
102395905 (SMG7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
Motif
Other DBs
NCBI-GeneID:
102395905
NCBI-ProteinID:
XP_006048704
LinkDB
All DBs
Position
5:complement(16428574..16514957)
Genome browser
AA seq
1187 aa
AA seq
DB search
MSLQSAQYLRQAEVLKADMTDSKLGPAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDL
WNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCR
VKSSQLGIISNKQTHTSAIVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQ
LVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEV
KTKWGVSDFIKAFIKFHGHVYLSKSLEKLSPLREKLEEQFKRLLFQKAFNSQQLVHVTVI
NLFQLHHLRDFSNETEQHSYSQDEQLCWTQLLALFMSFLGILCKCPLQNKSQEESYNAYP
LPAVKVSMDWLRLRPRVFQEAVVDERQYIWPWLISLLNSFHPHEEDLSSTNATPLPEEFE
LQGFLALRPSFRNLDFSKGHQGITGDKEGQQRQIRQQRLISIGKWIADNQPRLIQCENEV
GKLLFITEIPELILEDPSEAKENLILQDTTIIESLAADGNPGLKSVLSTGRNLSNSCDTG
EKPVVTFKENIKPREVNRDQGRSFPPKEVRRDYSKGVAVTKNDGKKDNNKRKTETKKCTL
EKLQETGKQSVAVQVKSQTELRKTPVSEARKTPVTQTPSQASNSQFIPIHHPGAFPPLPS
RPGFPPPTYVIPPPVAFSMGSGYTFPAGVSVPGTFLQPTAHSPPGNQVQAGKQSHIPYSQ
QRPSGPGPVTQGPQQPQPPSQQPLPPLPAPPAAQTAGQLQVQALAQQQQSPTKAVPALGK
SPPHHSGFQQYQQADASKQLWNPPQVQGPLGKIMPVKQPYYLQTQDPIKLFEPSLQPPVR
QQQPLEKTMKPFPMEPYNHNPSEVKIPEFYWDSAYSAADNRAVMAQQASVDRRGRRSPGV
FRPEQDPVPRMPFEDPKGSPLLPPDLLKSLAALEEEEELIFSNPPDLYPALLGPLASLPG
RSLFKSLLEKPSELMSHSSSFLSLTGFSLNQERYPNNSVFNEVYGKNLTTSSKAELNPSM
APQETSLYSLFEGTPWSPSLPASSDHSTPASQSPHSSNPSSLPSSPPTHNHNSVPFSNFG
PIGTPDNRDRRTADRWKTDKPAMGGFGIDYLSATSSSESSWHQASAPSGSWTGHGPSMED
SSAVLMESLKSIWSSSMMHPGPSALEQLLMQQKQKQQRGQGAMNPPH
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgcagagcgcgcagtatctccggcaggcagaagtcctgaaggctgacatgaca
gattctaagctgggtccagccgaagtctggacatccaggcaggctctgcaggacctgtac
cagaaaatgcttgttactgatttggaatacgctttagacaagaaagtagaacaggatctc
tggaatcatgcctttaagaatcagatcacaacactacaaggccaggcaaagaatcgagca
aacccgaatcggagtgaagttcaggcaaacctttctctgttcctagaggcagctagtggc
ttctatactcagttattacaagaactgtgtacagtgtttaatgtagatttaccatgccgt
gtgaagtcttcccagttgggaattatcagcaataaacagacgcataccagcgccatagtg
aagccacagtctagctcctgttcctatatctgccagcactgcctcgttcaccttggagac
attgctcgatacagaaaccagaccagccaggcagagtcctactataggcatgcggctcag
cttgtcccctctaatggtcagccttacaatcagttggctatcttagcttcttccaaagga
gaccatctgactacaattttctactactgcagaagcattgctgtgaagttccctttccca
gctgcctctactaatctacaaaaagcactttctaaagcactggaaagccgggatgaggtg
aaaaccaaatggggtgtttctgacttcatcaaggcctttattaaattccacggtcatgtg
tacctgagtaagagcttggaaaagttgagccctcttcgagagaagttggaagaacagttt
aagaggctgctattccagaaagctttcaactctcagcagttagttcacgtcactgtcatt
aacctgtttcaacttcatcatcttcgtgactttagcaacgaaacggagcagcatagttat
agccaagatgagcagctgtgttggacacagttgctggccctctttatgtcttttcttggc
atcctgtgcaagtgtcctctccagaacaagtctcaggaggaatcctacaatgcctatccc
ctacctgccgtcaaggtgtccatggactggctgagactcagacccagggtgtttcaggag
gcagtggtggatgaaagacagtacatttggccgtggctaatttctcttctgaacagtttc
catccccatgaagaagatctttcaagtactaatgcaacaccacttccagaggagtttgag
ttacaaggattcttggctttgagaccttctttcaggaacttggatttttccaaaggtcat
cagggtattacaggagacaaagagggtcagcaacgacaaatacgacagcagcgtttgatc
tctataggcaaatggattgcagataatcagccaaggctgattcagtgtgaaaatgaggta
gggaaattgttgtttatcacagaaatcccagagttaatactggaagaccccagtgaagcc
aaagagaacctcattctgcaagacacaaccatcatagagtccctggcagctgacgggaac
ccaggactgaaatcagtgctgtcgacaggccggaatctaagcaacagctgtgacacggga
gagaaaccagtggtcaccttcaaagagaacattaagccccgagaagtgaacagagaccaa
ggcagaagttttcctcccaaagaggtgagaagggactatagcaaaggagtagctgtaact
aagaatgatggaaagaaggacaacaacaagaggaaaacagaaaccaagaaatgcacctta
gaaaagttacaggaaacaggaaagcagagtgtggcagtgcaggtaaaatctcagacagag
ttaagaaagactccagtgtctgaagccaggaaaacacctgtaactcaaaccccaagtcaa
gcaagtaactcccagttcatccccattcatcaccctggagccttccctcctcttcccagc
cggccagggttcccgcccccaacatatgttatcccccctcctgtggcattttctatgggc
tcaggttacaccttcccagctggtgtttctgtcccaggaacctttcttcagcctacagct
cactctccaccaggaaaccaggtgcaagctgggaaacagtcccacattccttacagccag
caacggccctccggaccagggccagtgacccagggacctcagcagcctcagccaccttcc
cagcagcccctcccacctctgccagctccgccagcagcacagactgcaggccagctgcag
gttcaggctctagctcagcagcaacagtcccctacaaaagctgtgccggctttggggaaa
agtcctcctcaccactctggattccagcagtatcaacaggcagatgcctccaaacagctg
tggaatccccctcaggttcaaggcccattagggaaaatcatgcctgtgaaacagccctac
taccttcaaacccaagaccccataaaactgtttgagccgtcgttgcaacctcctgtaagg
cagcagcagcctctcgagaaaacaatgaagcctttccccatggagccatataaccataac
ccctcagaagtcaagatcccagagttctactgggattctgcctacagcgctgctgataac
agagctgtgatggcgcagcaagccagcgtggaccgcaggggcagacggtccccgggagtc
ttccgtccagagcaggaccctgtgcccaggatgccatttgaggatcccaaaggctcccct
ctgcttcctccggacctgttaaagagtctggctgccttggaggaagaggaagagctgatt
ttttctaaccctcctgatctttacccagctctgctggggcctctcgcctctcttcctgga
cgaagcctctttaaatccttactggagaagccctcagagctcatgtcacattcatcctct
ttcctgtccctcaccggattctccctcaatcaggaacgatacccaaataacagtgtgttc
aatgaggtatacgggaagaacctgacaaccagctccaaagcagaacttaatccctcaatg
gctccccaggaaacatcattgtactcgctttttgaagggactccatggtctccatctctt
cctgccagttcagatcattcaacaccagccagccagtctcctcattcctccaacccaagc
agcctgccaagctcccctccaacacacaaccacaattctgtcccattctccaattttgga
cccattgggactccagataacagggataggagaactgcagaccggtggaaaactgataag
ccagccatgggtgggtttggcatcgattatctctcagcaacatcatcctctgagagcagt
tggcatcaggccagcgctccaagtggctcctggacaggccatggcccatccatggaggat
tcctctgctgtcctcatggaaagcctaaagtctatctggtccagttccatgatgcatcct
ggaccttccgctttggagcagctgttaatgcagcagaagcagaaacagcagcggggacaa
ggcgccatgaaccctccacactga
DBGET
integrated database retrieval system
