Bubalus bubalis (water buffalo): 102395936
Help
Entry
102395936 CDS
T05912
Symbol
AMFR
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04137
Mitophagy - animal
bbub04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102395936 (AMFR)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
102395936 (AMFR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bbub04121
]
102395936 (AMFR)
Enzymes [BR:
bbub01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
102395936 (AMFR)
Ubiquitin system [BR:
bbub04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102395936 (AMFR)
Multi subunit type E3
ERAD complex
102395936 (AMFR)
LMBR1L-GP78-UBAC2 complex
102395936 (AMFR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
G2BR
zf-RING_2
zf-C3HC4_2
CUE
zf-C3HC4
zf-RING_11
zf-C3HC4_3
zf-ANAPC11
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-RING_16
Prok-RING_4
SVIP
zf-C3HC4_4
zf_RING_Vps8
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
102395936
NCBI-ProteinID:
XP_006053723
LinkDB
All DBs
Position
18:23828169..23873674
Genome browser
AA seq
645 aa
AA seq
DB search
MPLLFLERFPWPSLRTYTGLSGLALLGTIVSAYRALSQPEAGPGPTEAEPVTAPVQPDPA
ALVRPSAGGPRARDVAQYLLSDSLFVWVLVNTACCILMLVAKLIQCIVFGPLRVSERQHL
KDKFWNFIFYKFIFIFGVLNVQTVEEVVMWCLWFAGLVFLHLMVQLCKDRFEYLSFSPTT
PMSSHGRVLSLLVAMLLSCCGLAVVCCVTGYTHGMHTLAFMAAESLLVTVRTAHVILRYV
IHLWDLNHEGTWEGKGTYVYYTDFVMELTLLSLDLMHHIHMLLFGNIWLSMASLVIFMQL
RYLFHEVQRRIRRHKNYLRVVGNMEARFAVATPEELAVNNDDCAICWDSMQAARKLPCGH
LFHNSCLRSWLEQDTSCPTCRMSLNIADNNRVREDHPGENLDENLVPVAAAEGRPRLNQH
NHFFHFDGSRIASWLPSFSVEVMHTTNILGITQASNSQLNAMAHQIQEMFPQVPYHLVLQ
DLQLTRSVEITTDNILEGRIQVPFPTQRSESIRPALNSPVERPNGEQEDGEASVQTERVP
LDLSPRLEEALDFGELEAEPSEGEDFEARGSRFSKSADERQRMLVQRKDDLLQQARRRFL
NRSSEDDSASESCLPSEGTTSDPVTLRRRMLAAAAERRLQKQQAS
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgctctttctcgagcgcttcccctggcccagcctccgcacctacacgggcctc
agcggcctggccttgctcggcaccatcgtcagcgcctaccgcgctctcagtcagcctgag
gccgggcccgggcccacagaggcggagccggtaacggccccggtgcagccagatccggcc
gcgctcgtccggccgagcgccgggggaccccgggcccgcgacgtggcccagtacctgctc
tcggacagcctgttcgtgtgggttctagtaaatactgcttgctgcatcttgatgttggtg
gctaagctaatccagtgtatcgtgtttggccctcttcgagtgagcgaaagacagcacctc
aaagacaagttttggaattttattttctacaagttcattttcattttcggggtgctgaat
gtccaaacagtggaagaagtggtcatgtggtgcctctggtttgctggactagtatttctg
cacctgatggttcagctctgcaaggaccggtttgaatatctttctttttctcccaccacc
cccatgagtagccacggccgagttctgtccctcctggtcgccatgctgctttcctgctgc
gggttagcagtcgtctgttgcgtcacaggctacacccatgggatgcacacgttggctttc
atggctgcagagtctcttcttgtgacagtgaggactgctcatgtgattttacgatacgta
attcacctctgggacctcaaccatgaagggacatgggaaggaaaggggacgtatgtctat
tacacagattttgtcatggagctcactctcttgtccttggacctcatgcaccatattcac
atgttgttatttggcaacatctggttgtccatggccagcttggtcatcttcatgcagctg
cgttacctgtttcatgaagtacagcgtcgcatccgccggcacaagaactatttgcgagtg
gtcggaaacatggaagccaggtttgcagtggcaactccagaggagctggctgtcaataac
gatgactgcgccatctgctgggactccatgcaggctgcgaggaaactgccctgtggacat
cttttccacaactcctgtcttcgttcctggctagaacaagacacctcctgccccacatgc
aggatgtctcttaacattgctgacaataatcgtgtccgggaagaccatccaggagagaac
ctggatgagaatttggttcctgtggcggcagcagaaggcagacctcgcttaaaccaacac
aatcacttcttccacttcgacgggtcccggattgcgagttggctgccgagtttctcagtc
gaagtgatgcacaccaccaacattctaggcattacacaggcaagcaactcccagctcaat
gcaatggctcatcagattcaagagatgtttccccaggtgccataccacctggtactacaa
gacctccagctgacacgctcggttgaaataacaacagacaacattctggaaggacggatt
caagtaccttttcccacccagcggtcagagagcatcaggcccgcattgaacagccccgtg
gaaaggccaaatggcgagcaggaggacggagaagcctctgttcagaccgagcgggtgccg
ctggacctcagtcctcggctggaggaggcactggacttcggcgagctggaggcggagccc
agtgagggggaggactttgaggcccggggcagccgcttctccaagtcggcagacgagagg
cagcgcatgctggtgcaacgcaaggatgacctgctgcagcaggcgcggaggcgtttcttg
aacagaagctctgaagatgactcggcctcagagagctgcctgccctcagaagggacaacc
tctgaccccgtgaccctgcgtcgaaggatgctggccgctgcggccgagcggagacttcag
aagcagcaggcctcctag
DBGET
integrated database retrieval system
