Bubalus bubalis (water buffalo): 102396049
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Entry
102396049 CDS
T05912
Symbol
JMJD1C
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X8
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
102396049 (JMJD1C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bbub03036
]
102396049 (JMJD1C)
Chromosome and associated proteins [BR:
bbub03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
102396049 (JMJD1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWWP_KDM3B
DUF7030
Tudor_KDM3B
JmjC
C1_2
zf-C5HC2
FYVE
Motif
Other DBs
NCBI-GeneID:
102396049
NCBI-ProteinID:
XP_025140894
LinkDB
All DBs
Position
4:complement(138480328..138797922)
Genome browser
AA seq
1865 aa
AA seq
DB search
MAVETRPELVGKRFLCLALGEEARLERGESGRCWRGWRAGVIRAVSHRDSRNPDLAVYVE
FDDLEWDKREWVKVYEDFSTFLVEYHLIWARRINPSQTQGSKSKQIQWPALTFKPLVEKS
VPSSITAVEFLVDKQLDFLTEDSAFQPYQDDIDSLNPVLRDNPQLQEEVKVWVKEQKVQE
IFMQGPYSLNGYRVRVYRQDSATQWFTGIITHHDLFTRTMIVMNDQNSPSPWLHQPTPVT
SADGIGLLSHIPVRPSSAEPHRPLKIAAHSSPPLTKCLVDHHKEELERKAFIEPLRSVAS
TSAKNDLDLNRSQTGKDGHLHRHFVDPVLNQLQRPPQETGERLNKYKEEHRRILQESIDV
APFTTKIKGLECDRDNYSRVASSSSSPKSHVIKQDKDIESDLYKMKHSVPHSLPQSNYFT
TLSNSVVNEPPRSYPSKEISNIYTEKQSNTLATAANPQTLTSFISSLSKPPPLIKHQPES
EGLVGKVPEHLSHQIASHSVTTFRNDCRSPTHLTVSSTNTLRSMPALHRAPVFHPPIHHS
LERKESSYSSLSPPTLTPVMPVNAGGKVQESQKPPTLIPEPKDTQASFKSSSEQSLTEMW
KSNNNLSKEKAEWRVEKSSGKSQAATASVIVRPPSSTKLDSVPAVQLASKERVSERSSLG
ANQTDCLKPAEAGESGRVILPSVNSDSAHIKSEKNFQAVSQGSVPSSVTSAVSTVCNTKT
DTFTSAATAPGVSSWGGSEIIYSLSNTILASKSLECTSSKSVSHSVTQTQECTVSIAAPV
TPASSKTGSAVQPSSGFSGTTDFIHLKKHKAALAAAQYKSSNVSETEPNAAKNQTSSASH
LLDSAVVCSTINKADSVGNGQASQTSQPNYHTKLKKAWLTRHSEEDKNTNKMENSGSSVS
EIIKPCSVNLIASTSNDLQNSVDSKIIVDKYVKDDKINRRKAKRTYESGSESGDSDESES
KSEQRTKRQPKPTYKKKQNDLQKRKGEMEEDLKPNGILSRSAKEKSKLKLQSNNNSAGIP
RSVLKDWRKVKKLKQTGESFLQDDSCCEIGPNLQKCRECRLIRSKKGEEPTHSPVFCRFY
YFRRLSFSKNGVVRIDGFSSPDQYDDEAMSLWTHENYEDDELDIETSKYILDIIGDKFCQ
LVTSEKTALSWVKKDAKIAWKRAVRGVREMCDACEATLFNIHWVCQKCGFVVCLDCYKAK
ERKSSRDKELYAWMKCVKGQPHDHKHLMPTQIIPGSVLTDLLDAMHTLREKYGIKSHCHC
TNKQNIQVGNFSPMNGVSQVLQNVLNHSNKISLCMPESQQQSTPQKPESNGSSSPGSDVS
TDSKLTPPESQSPLHWLADLAEQKAREEKKENKEFALEKQIKEEREQDDPDSPNSRTSPP
VSQNNEQGSTLRDLLTTTAGKLRVGSTDAGIAFAPVYSMGTPSGKSGRTMPNILDDIIAS
VVENKIPPNKASKINVKSEFKEEPKESRKSAMDENNKLYSDIPHSWICEKHILWLKDYKN
TNNWKLFKECWKYGQPAVVSGVHKKMNISLWKADSISLDFGDHQADLLNCKDSIISNANV
KEFWDGFEEVSKRQKTKSGETVVLKLKDCPSGEDFKTMMPARYEDLLKSLPLPEYCNPEG
KFNLASHLPGFFVRPDLGPRLCSAYGVAAAKDHDIGTTNLHVEVSDVVNILVYVGIAKGN
GILSKAGILKKFEEEDLDDILRKRLKDSSEIPGALWHIYAGKDVDKIREFLQKISKEQGL
EVLPEHDPIRDQSWYVNKKLRQRLLEEYGVKTCTLVQFLGDAIVLPAGALHQVQNFHSCI
QVTEDFVSPEHLVQSFHLTQELRLLKEEINYDDKLQVKNILYHAVKEMVRALKIHEDEVE
AMEEN
NT seq
5598 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggagacgcggccggagctggtggggaagcggttcctttgcctggcgcttggc
gaagaggcgcggctggagcgcggggagagcggacgctgctggcggggctggcgagcgggg
gttatccgagcggtgtcacacagggacagccgcaatcccgacctggcggtgtatgtggaa
tttgatgatcttgagtgggataaacgagagtgggttaaagtttatgaagatttttcaacc
ttcttggtggaataccacttaatctgggccagaaggatcaaccctagccagactcaggga
tcaaagagcaaacagattcagtggcctgcattgactttcaaacccctggttgaaaaaagt
gtacccagttcaatcactgcagtagaattccttgtagataaacaactggattttttaact
gaagatagtgcctttcagccctaccaggacgacatagacagcctaaacccagttctcagg
gacaacccgcaacttcaggaagaagtgaaagtctgggtaaaggaacaaaaggttcaggag
atttttatgcaaggtccttactccttgaatggatacagagtgagagtatatagacaagac
tctgccacccagtggttcactggcataattactcatcatgatctcttcactcgcaccatg
atcgttatgaatgatcagaattctcccagtccttggttacatcagcctacccctgtgacc
tcagcagatggtattggattacttagtcacattcctgtcagaccttccagtgcagaacct
catcggcctcttaaaatcgcagcacattccagtccaccactgacaaaatgtttagtagat
caccataaagaagaattggagaggaaagctttcattgaaccattgcgttctgttgcatcc
acatcagccaaaaatgacctggatctaaataggtcacagactggaaaagatggtcacttg
cataggcattttgtggatcctgtattgaatcaattacagagaccaccccaggaaactgga
gagagattaaacaaatataaggaggaacaccgtcgaattcttcaagaaagtattgatgtt
gctccctttacgactaaaatcaaaggtcttgagtgtgacagagataattactccagggta
gcatcgtcatcttctagccctaagagccatgtcatcaaacaagacaaggatatagaatca
gatctttataaaatgaagcactcagtgcctcacagtttgcctcaaagtaactatttcact
acattgtctaatagtgtagtcaatgaaccaccaaggtcatacccatccaaagagatttca
aatatttacactgaaaaacagagtaatacccttgcaacagcagctaatcctcaaactctg
acttcatttatatcatctctttcaaagcctccacctttgataaaacatcagccagaaagt
gaaggtttagtaggcaaggtaccagaacatctttcccatcaaattgcttctcactcagta
acaactttcagaaatgactgtaggagtcctactcatttgacagtttcttctacaaataca
ctccggagtatgcctgctttacatagagcaccagtatttcacccgccgatccatcatagc
ctggaaagaaaggaaagcagctatagtagcctttcccctccaacgttaactccagtgatg
cctgtaaatgctggtgggaaagttcaagaatcacaaaagcctcccacactgattcctgag
ccaaaagatactcaggcaagttttaagagttcttctgaacagagtttgacagaaatgtgg
aaatctaataataacctcagcaaagagaaagctgaatggcgtgtagagaaaagcagcgga
aagtcccaggctgccacggcgtctgtcatcgtgcgtccaccttcgagtacgaaacttgac
agcgtgccagcagtacagttagcttccaaagagcgagttagtgaaagatcttcacttggg
gcaaatcaaacagattgcctcaaaccagcagaagctggagagagtggaagagtcattctg
ccaagtgtgaattcagacagtgctcacataaaatccgaaaaaaactttcaggctgtctca
cagggcagtgttcccagttcagtcacgtctgctgtaagtacagtgtgtaataccaaaacg
gatacattcacatctgctgccactgcccccggtgtttccagctggggtggttcagaaata
atttactcattatcaaataccattttggcctctaaatccttagaatgtacctcttcaaaa
agcgtcagtcattcagtgactcaaacacaagaatgcacggtcagcatcgcagctccagtt
acaccagccagtagtaagacaggaagtgctgttcagcccagctctgggttttcaggcaca
actgattttattcatttaaagaagcacaaggcagcattggccgcagctcaatataaaagt
agtaatgtcagtgagactgagcctaatgctgcgaaaaatcagacgtcttcagcctcccat
ctcttagatagcgctgtagtctgtagtacaataaacaaagcagactctgtaggaaatggg
caagcatcccagacaagtcaaccaaactaccatactaaactgaaaaaagcctggcttacg
agacattcagaagaagataaaaatactaataaaatggaaaattcagggagttctgtatca
gaaattattaagccatgttctgtcaatttaatagcctctacatctaatgatctacaaaat
agtgtggatagtaagatcatagttgataaatatgtaaaagatgataaaataaatagaaga
aaagccaaacgaacttatgaatctggctccgaaagtggagattcggacgaaagtgaaagc
aaatcagagcaaaggactaaaaggcaacctaagccaacttacaaaaagaagcaaaatgat
cttcaaaagagaaaaggtgaaatggaagaagatttaaaacccaatgggattctcagcagg
agtgccaaagaaaaaagtaaattgaagttgcagagcaacaataatagtgctggcatccct
cgttcagtattgaaagattggcgtaaagtcaagaagctgaagcaaactggggaatccttt
ttacaggatgactcctgctgtgagatagggcctaatttgcaaaagtgccgagaatgtaga
cttattcggagtaaaaagggagaagaaccaactcactcaccagtgttttgtagattttac
tactttagacgattgtcatttagtaaaaatggagtggttagaatagatggtttctcttct
cctgaccagtatgatgatgaagctatgagtttatggacacatgaaaattatgaagatgat
gaactagacatagaaacgtcaaaatacatcttggacataataggtgataagttctgtcag
ttggtaacatctgaaaaaacagctttgtcctgggtgaaaaaggatgccaaaattgcctgg
aaaagagcagtgaggggagtccgggagatgtgtgatgcatgtgaagcaacattgttcaac
attcactgggtctgccaaaaatgtggatttgtggtctgcttagattgttacaaggcaaag
gaaaggaagagttctagagataaagaattgtatgcttggatgaagtgtgtgaaggggcag
cctcatgatcacaaacatttgatgccaactcaaattatacctggttctgttttgacagat
cttttggatgcgatgcacactcttagagaaaaatatggtattaaatcccattgtcattgt
actaacaaacagaatatacaagttggaaatttttctcctatgaatggtgtgtctcaagtt
ttacagaatgttcttaatcacagtaataaaatttctctgtgcatgcctgagtctcagcag
caaagtacccctcagaagcctgaaagtaatggcagcagcagtccagggagtgatgtgagc
acagacagcaagttaactcctccagagtcccagtcacccctgcactggttagcagatctt
gcagagcaaaaggccagagaggaaaaaaaagaaaacaaagaatttgcccttgaaaagcaa
ataaaagaagagagagaacaagatgatcctgattctccaaatagtagaacatcacctcct
gtatcccagaataatgagcaaggttcaacattacgagatttgctgaccacaactgctggc
aagctacgcgtgggttctacagatgctggcattgcctttgcaccagtttattcaatggga
acccccagtggtaaaagtggaaggactatgccaaacattcttgatgacataattgcttca
gttgttgaaaacaaaattccaccaaataaagcctctaagataaatgtaaaatcagagttc
aaagaagaacccaaagaaagcagaaaatctgccatggatgaaaacaacaaattgtacagt
gatataccacattcttggatctgtgagaagcatattctgtggcttaaagattataaaaat
actaataattggaagcttttcaaagagtgttggaaatatggacaacctgcagtggtttct
ggcgtgcataagaaaatgaacattagcttgtggaaggcggactcaattagtcttgatttt
ggagaccaccaagctgatctcctcaactgcaaagacagcattatttcaaatgccaatgtt
aaggaattctgggatggttttgaggaagtttcaaaacggcaaaaaacaaaaagtggagaa
acagttgttttaaaattgaaagactgcccttcaggagaagacttcaagactatgatgcca
gcaagatatgaagatcttttaaaaagcctgccattgccagaatattgtaatccagaagga
aaattcaacctggcctctcatttaccggggttctttgtgcgccctgatctaggacccagg
ttgtgcagtgcttatggtgtagctgctgctaaagatcatgatataggaacaacaaatcta
catgttgaagtttctgatgttgtaaatattctagtctatgttggcatagcaaaaggaaat
ggcattctctcaaaagcaggaatactcaagaaatttgaggaagaagatttggatgacatt
ttaagaaaacgattgaaggactcaagtgaaatacctggtgctctgtggcatatttatgct
gggaaagatgttgacaagatacgggaatttcttcagaagatttcaaaagaacaaggcctt
gaagttctaccagaacatgatccaatacgtgaccagagttggtatgtaaacaaaaagctt
cgtcaaagactgcttgaggaatatggagtcaaaacctgcactcttgttcagttccttggt
gatgccattgtcttaccagcaggagcacttcatcaggtacagaattttcacagctgtatt
caggtaactgaagactttgtgtctccagaacatctcgtacagtcatttcatttaacacaa
gaactgagacttttgaaggaagaaatcaattatgatgataaactacaggttaaaaatatc
ttgtatcatgcagtcaaggaaatggtgagagctttgaagatacatgaagatgaagtagag
gctatggaagaaaattag
DBGET
integrated database retrieval system
