Bubalus bubalis (water buffalo): 102396129
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Entry
102396129 CDS
T05912
Symbol
FXR1
Name
(RefSeq) fragile X mental retardation syndrome-related protein 1 isoform X4
KO
K15516
fragile X mental retardation protein
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbub03019
]
102396129 (FXR1)
Messenger RNA biogenesis [BR:
bbub03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
102396129 (FXR1)
Factors involved in mRNA localization
Other mRNA localization factors
102396129 (FXR1)
mRNA cycle factors
Stress granule specific factors
102396129 (FXR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXR_C1
KH_9
FXMRP1_C_core
Tudor_FRX1
FXR_C3
KH_1
Agenet
KH_2
KH-I_KHDC4-BBP
DUF150_C
Tudor_2
Motif
Other DBs
NCBI-GeneID:
102396129
NCBI-ProteinID:
XP_006051055
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Position
1:complement(131478335..131547265)
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AA seq
621 aa
AA seq
DB search
MAELTVEVRGSNGAFYKGFIKDVHEDSLTVVFENNWQPERQVPFNEVRLPPPPDIKKEIS
EGDEVEVYSRANDQEPCGWWLAKVRMMKGEFYVIEYAACDATYNEIVTFERLRPVNQNKT
VKKNTFFKCTVDVPEDLREACANENAHKDFKKAVGACRIFYHPETTQLMILSASEATVKR
VNILSDMHLRSIRTKLMLMSRNEEATKHLECTKQLAAAFHEEFVVREDLMGLAIGTHGSN
IQQARKVPGVTAIELDEDTGTFRIYGESADAVKKARGFLEFVEDFIQVPRNLVGKVIGKN
GKVIQEIVDKSGVVRVRIEGDNENKLPREDGMVPFVFVGTKESIGNVQVLLEYHIAYLKE
VEQLRMERLQIDEQLRQIGSRSYSGRGRGRRGPNYTSGYGTNSELSNPSETESERKDELS
DWSLAGEDDRESRHQRDSRRRPGGRGRSVSGGRGRGGPRGGKSSISSVLKDPDSNPYSLL
DNTESDQTADTDASESHHSTNRRRRSRRRRTDEDAVLMDGMTESDTASVNENGLVTVADY
ISRAESQSRQRNLPRETLAKNKKEMAKDVIEEHGPSEKAINGPTSASGDEISKLQRTPGE
EKINTLKEENTQDAAVLNGVS
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggcggagctgacggtggaggttcgcggctccaacggggctttctacaagggatttatc
aaagatgttcatgaagactccctcacagttgtttttgagaacaattggcaaccagaacgc
caggttccattcaatgaagttagattaccaccaccacctgatataaaaaaagaaattagt
gaaggagatgaagtagaggtatattcaagagcaaatgatcaagaaccatgtggatggtgg
ttggctaaagttcgaatgatgaaaggagaattttatgtcattgaatatgctgcttgtgat
gccacttacaatgaaatagtcacatttgaacgacttcggcctgtcaatcaaaataaaact
gtcaaaaaaaataccttctttaaatgcacagtggatgttcctgaggatttgagagaggcg
tgtgctaatgaaaatgcacataaagattttaagaaagccgtaggagcatgcagaattttt
taccatccagaaacaacacagctaatgatactgtctgccagtgaagcaactgtgaagaga
gtaaatattttgagtgacatgcatttgcgaagtattcgtacaaaattgatgcttatgtcc
cgaaatgaagaggccactaaacatttagaatgcacaaagcaacttgcagcagcttttcat
gaggaatttgttgtgagagaagatttgatgggcctggcgataggaacacatggtagtaac
atacagcaagctagaaaggttcctggagttacagctattgagctagatgaagatactgga
acatttagaatctacggagagagtgctgatgctgtaaaaaaggctagaggtttcttggaa
tttgtggaggattttattcaggttcctaggaatcttgttggaaaagtaattgggaaaaat
ggcaaagttattcaagaaatagtagacaaatctggtgtggttcgggtgagaattgaagga
gacaatgaaaataaactacctagagaagatggaatggttccatttgtatttgttggcact
aaagaaagcattggaaatgtgcaagtgcttttagagtatcatattgcttatctaaaggaa
gtagaacagctaagaatggaacgactacagattgatgaacaacttcgacagattggttct
aggtcttatagtggaagaggcagaggtcgtcggggccctaattacacctccggttatggt
acaaactctgagctgtctaacccatctgaaactgaatctgagcgtaaagatgagctgagt
gattggtcactggcgggagaagatgaccgagagagtcggcatcagcgtgacagcaggaga
cgcccaggaggaagaggcagaagtgtttcagggggtcgaggtcgtggtggaccacgtggt
ggcaaatcttccatcagttctgtgctcaaagatccagacagcaatccatacagcttactt
gataatacagaatcagatcagactgcagacactgatgccagcgaatctcatcacagtact
aaccgtcgtaggcggtctcgtagacgaaggactgatgaagatgctgttctgatggatggg
atgactgaatccgatacagcttcagttaatgaaaatgggctagtcacagttgcagattat
atttctagagctgagtctcagagcagacaaagaaacctcccaagggaaactttggctaaa
aacaagaaagaaatggcaaaagatgtgattgaagagcatggtccttcagaaaaggcaata
aatggcccaactagtgcttctggcgatgaaatttctaagctacagcgtactccaggagaa
gaaaagattaataccttaaaagaagaaaatactcaagatgcagcagtcctgaatggtgtt
tcataa
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