Bubalus bubalis (water buffalo): 102396211
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Entry
102396211 CDS
T05912
Symbol
USP39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102396211 (USP39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bbub03041
]
102396211 (USP39)
Spliceosome [BR:
bbub03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
102396211 (USP39)
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
102396211
NCBI-ProteinID:
XP_006045923
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Position
12:complement(48835438..48873217)
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AA seq
565 aa
AA seq
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MSSRSKRDSRGSTRGKRESESRSSSARVKRERDREREPEAPSFRSSPVRVKREVEPASAR
EAPTPVVPVVRVKREREADEDSEPEREVRAKNGRVDSEDRRSRHCPYLDTINRSVLDFDF
EKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYE
IIDSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVL
QALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEML
QAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKL
PHPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILA
KFNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDL
REYLSEEVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQ
MITLSEAYIQIWKRRDNDETNQQGA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgtccagccggtccaagcgggattctcgcggttccacccgcgggaagcgcgagtccgag
tcgcgaagcagctcggctcgcgtcaaacgggaacgagatcgggagcgggagcccgaggcg
ccgagcttccggagcagcccagtgcgcgtgaagcgggaggtcgagccggcgagcgcgcgc
gaggccccgacgccggtagtcccggtggtgcgggtgaagcgggagcgcgaggccgacgag
gactcggaacctgagcgggaggtgcgagcaaagaatggccgcgtggattctgaggaccgg
aggagccgccactgcccgtacctggataccattaataggagtgtgctggactttgacttt
gagaaattgtgttccatctccctctcgcacatcaatgcatatgcttgtctggtgtgtggc
aagtactttcaaggccggggtttgaagtctcacgcctacattcacagtgtccagtttagt
caccatgtcttcctcaacctccacaccctcaagttttactgcctccctgacaactatgag
atcatcgattcctcactagaggatatcacgtatgtgttgaagcccactttcacaaagcag
cagattgctaacttggacaagcaagccaagttgtcccgggcatatgacggcaccacttac
ctgccaggtatcgtgggcctgaataacataaaggccaatgactacgccaacgccgtcctt
caggctctgtctaacgttcctcctctccggaactacttcctggaagaagacaattataag
aacatcaaacgtcctcctggggatatcatgttcttgttggtccagcgtttcggagagctg
atgagaaaactctggaaccctcgcaatttcaaagctcatgtctctccccatgagatgctg
caggctgttgtcctctgcagcaagaagacttttcagatcacgaaacagggggatggagtt
gattttctgtcctggtttttgaatgctctacactcagctctggggggcacaaagaagaaa
aaaaagacaattgtaactgacgttttccaggggtccatgaggatcttcactaaaaaactg
cctcatcctgatctgccagcggaagagaaagagcagctgctgcataatgacgagtaccag
gagacgatggtggagtccacgtttatgtacctgacactggaccttcctaccgcccccctg
tacaaggacgagaaggagcagctcattatcccccaggtgcctctcttcaacatcctggcc
aagttcaacggcatcactgagaaggaatataagacctacaaggagaactttctgaagcgc
ttccagctcaccaagctgcctccatatctaatcttttgtattaagagattcactaagaac
aatttctttgtggagaagaatccgactattgtcaacttcccgattacaaatgtggacctg
agagagtacttgtctgaagaagtgcaggcagtgcacaagaataccacctatgacctcatc
gccaacatcgtacacgacggcaaaccctccgagggctcctaccggatccacgtgctccac
catgggacaggcaaatggtatgaattacaggacctccaggtgaccgacatccttccccag
atgatcacactgtcggaggcttacattcagatttggaagaggcgagataatgatgaaacc
aaccagcagggggcatga
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