Bubalus bubalis (water buffalo): 102396327
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Entry
102396327 CDS
T05912
Symbol
MYO5C
Name
(RefSeq) unconventional myosin-Vc
KO
K10357
myosin V
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
102396327 (MYO5C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbub03019
]
102396327 (MYO5C)
04131 Membrane trafficking [BR:
bbub04131
]
102396327 (MYO5C)
03029 Mitochondrial biogenesis [BR:
bbub03029
]
102396327 (MYO5C)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
bbub04812
]
102396327 (MYO5C)
Messenger RNA biogenesis [BR:
bbub03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
102396327 (MYO5C)
mRNA cycle factors
P-body specific factors
102396327 (MYO5C)
Membrane trafficking [BR:
bbub04131
]
Others
Actin-binding proteins
Myosins
102396327 (MYO5C)
Mitochondrial biogenesis [BR:
bbub03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
102396327 (MYO5C)
Cytoskeleton proteins [BR:
bbub04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
102396327 (MYO5C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
AAA_22
NPHP3_N
AAA_13
Motif
Other DBs
NCBI-GeneID:
102396327
NCBI-ProteinID:
XP_025151389
LinkDB
All DBs
Position
11:complement(45156521..45274227)
Genome browser
AA seq
1743 aa
AA seq
DB search
MAVAELYTKYNRVWIPDSEEVWKSAEIAKDYRVGDKVLQLLLEDGTELDYSVDPECLPPL
RNPDILVGENDLTALSYLHEPAVLHNLRIRFAESKLIYTYSGIILVAMNPYKQLPIYGDP
IIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNKNQSIIVSGESGAGKTVSARYAMRYFAT
VSKSSSNAHVEDKVLASNPITEAVGNAKTTRNDNSSRFGKYTEISFDERNQIIGANMRTY
LLEKSRVVFQSENERNYHIFYQLCASAEQSEFKHLKLGSAEEFNYTRMGGSTVLEGVNDR
ADMIETQKTFTLLGFKEDFQMDVFKVLAAILHLGNVQIAAVGNERSVISEDDGHLEVFCE
LLGLESGRVAQWLCNRKIVTTSETVVKPMTRPQAVNARDALAKKIYAHLFDYIVERINQA
LQFSGKQHTFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEDI
PWTLIDFYDNQPVIDLIEAKMGILELLDEECLLPHGTDENWLQKLYNNFVNKNSLFEKPR
MSNTSFIIQHFADKVEYKCEGFLEKNRDTVYDMLVEILRASKFHLCANFFQENPVPSSPF
GSAITVKSAKPVIKPNNKHFRSTVGSKFRSSLYLLMETLNATTPHYVRCIKPNDEKLPFE
FDSKRIVQQLRACGVLETIRISAQSYPSRWTYIEFYSRYGVLMTKQELSFSDKKEVCKLV
LHRLIQDSNQYQFGKTKIFFRAGQVAYLEKLRLDKLRQGCIVIQKHVRGWLQRKKFLRER
RAALIIQQYFRGQKTVRKAVTATALKEAWAAIVIQKYCRAYLVRNLYQLIRVATITIQAY
TRGFLARRRYQKMLKEHKAVILQKYARAWLARRRFQNIRRFVLNIQLTYRVQRLQKKLED
QNKENHGLVEKLTSLAALRAGDVEKIQKLESELDRAATHRQNYEEKGMRYRASVEEKLAK
LQKHNSELEIQKEQIQLKLQEKTEELKEKMDNLTKQLFDDVQKEEQQRVLLEKSFELKTQ
DYEKQIQSLKEEIKALKDEKMQLQRQLEEERVTSDGLKGEVARLSKQAKTISEFEKEIEL
LQTQKIDVEKHVQSQKREMREKMSEITRQLLESYDIEDVRNRLSLEDLEHLNEDGELWFA
YEGLKKATRVLENHFQSQKDCYEKEIEALNFKVVHLSQEINHLQKLFREENDINESIRHE
VTRLTSENMMIPDFKQQISELEKQKQDLEIRLNEQTETMKGKLEELSNQLNHNQEEEGTQ
SKTFIEAQNEIHTKEKEKLMDKIQEIQEASEHLRKQSETENEVKSSFQQKASRLTVEKRD
LEEELDMKERVIKKLQDQVKTLTKTIEKANDVHLSSGPKEYLGMLEYKREDEAKLIQNLI
LDLKPRGVVVNMIPGLPAHILFMCVRYADSLNDADMLKSLMNSTINGIKQVVKEHLEDFE
MLSFWLSNTCHFLNCLKQYSGEEEFMKHNSPHQNKNCLNNFDLSEYRQILSDVAIRIYHQ
FIIVMENNIQPIIVPGMLEYESLQGISGLKPTGFRKRSSSIDDTDAYTMTSVLQQLSYFY
STMCQSGLDPEIVRQAVKQLFFLIGAVTLNSLFLRKDMCSCRKGMQIRCNISYLEEWLKD
KNLQNNLAKETLEPLSQAAWLLQVKKTTDSDAKEIYECCTSLSAVQIIKILNSYTPIDDF
EKRVTPSFVRKVQALLSSREDSSHLMLDTKYLFQVTFPFTPSPHALEMIQIPSSFKLGFL
NRL
NT seq
5232 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggccgagctatacacaaagtacaacagggtttggattcctgattctgaagaa
gtttggaagtctgctgaaatagcaaaggactatagagttggtgacaaagtcttgcaactc
ctgctggaggatggaacggagctggattattccgttgatcctgaatgtctgcctccactt
cgaaatcctgacatcctcgtgggtgagaacgacctcacagctctcagctatctccatgag
cctgcagtgctccacaatctcagaatccgttttgcagaatccaaactcatttacacctac
agcggaatcatcttggtggccatgaatccttacaagcagctgccgatatatggagatccc
atcatccacgcctacagcgggcagaacatgggcgacatggacccacacatatttgccgtg
gcggaagaggcatacaagcagatggccagaaacaataaaaaccagtcaataattgtaagt
ggggagtcgggtgctggaaagacagtgtctgctcgctatgccatgaggtactttgccacc
gtcagcaagtccagcagcaacgctcatgtggaagacaaggtcctagcatcaaaccccata
accgaggctgttggaaatgccaagaccacccgcaatgacaacagcagtcggtttgggaaa
tacacggaaattagttttgatgagagaaatcaaattataggagcgaacatgagaacttac
ctgctagagaaatccagagttgtctttcaatcagaaaatgaacgaaattaccacattttc
tatcagctttgtgcatccgcagagcagtcggaatttaaacatcttaagttagggagtgca
gaagaatttaattatacgagaatggggggcagtacggtccttgagggtgtgaatgacaga
gccgacatgatagagactcagaagaccttcacactgctgggtttcaaggaagattttcag
atggacgtttttaaggtcctggcagccatcctacatctgggcaatgtacagattgcagca
gtgggcaacgagagatcagtgatcagcgaggatgatggtcacctagaggtgttctgtgag
ctcctgggcctggagagtggcagagtcgctcagtggctgtgtaatcgcaagatcgtcaca
acctccgagacagtggtgaagcccatgaccaggccccaggctgtcaatgccagggatgca
ctggccaaaaagatctacgctcacctatttgactacattgtggagagaattaaccaagcc
ttgcagttttcaggcaagcagcacacttttattggtgttttggacatttatggttttgaa
acctttgatgtgaacagctttgaacagttttgcatcaattatgctaatgaaaagctgcaa
cagcagtttaacctgcatgtctttaaacttgaacaagaagagtatatgaaggaagacatt
ccttggactctgatagacttttatgacaaccaaccagtcattgacctgattgaagcaaaa
atgggcattttggagttactggatgaagaatgcttgttaccacatgggactgatgaaaac
tggcttcaaaagctgtataataattttgtcaacaaaaactctttgtttgaaaaacccaga
atgtcaaacacctcctttatcatccagcactttgcagataaggtagagtataaatgtgaa
ggtttccttgagaagaacagagataccgtctatgacatgctggttgaaatcctgagagca
agcaagtttcatctctgtgccaacttttttcaagaaaatccagttccttcttccccgttt
ggttcagcgatcacagtgaaatctgcaaagccagtcatcaagccaaacaacaagcatttc
cggagcaccgtggggagcaagttccgcagctctctgtacttgctcatggagacactcaac
gccaccactccccactatgtccgatgcattaagccaaatgatgagaaactgccctttgag
tttgactccaaaagaattgttcagcagctgcgagcctgtggcgtcttagaaacgattcgc
attagtgcccagagctacccttctaggtggacatacattgagttctacagccgctatggg
gtcctcatgaccaagcaggagctttcattcagcgataagaaggaagtgtgcaaattggtc
ttacaccggctcatccaggattctaatcagtaccagtttggtaaaaccaaaattttcttc
agagcagggcaagtggcttatttagaaaaactccggttggataaactgagacagggttgt
attgtgatacaaaagcatgtccgtggctggctccagagaaaaaaattcctcagagagaga
cgagcagccctgatcatccagcagtacttccggggtcagaaaaccgtgaggaaagctgtt
accgccaccgccttaaaagaagcgtgggcagccattgtcattcagaagtactgtcgagca
tatctcgttcgcaacttgtaccagctgattcgtgtggccaccatcaccatccaggcctac
acccgaggattcctggcaaggaggaggtatcaaaagatgctgaaggaacacaaggctgtg
attctacagaaatatgcccgggcatggctggccagacgcagatttcagaatatccgacga
ttcgtgctcaacattcagctcacttacagagttcagcgtttgcagaaaaagttagaagac
cagaacaaagagaaccatgggctggtggagaagctgaccagcctggctgcccttcgggcc
ggtgatgtggagaagattcagaaactggaatctgaactggacagagcggccacccacagg
cagaattatgaggagaaggggatgagatacagggcttccgtggaagagaaactggcaaag
cttcagaagcataattcagaattggaaatacagaaagaacaaatacagctgaagcttcaa
gagaagactgaagagttgaaagaaaaaatggataacctcaccaagcagctctttgatgat
gtgcaaaaagaagaacaacaaagagtacttcttgaaaaaagttttgaactgaaaacacaa
gactatgagaagcagatccagtctttgaaagaagaaattaaagctctcaaggatgagaag
atgcaactgcagcgtcagctggaagaagagcgggtcacctctgatggcctgaaaggagaa
gtggcccggctgagcaagcaggcaaagacgatctctgagtttgaaaaggagatagagtta
cttcagacacagaagatagacgtggaaaaacatgtgcagtcccagaaaagggaaatgaga
gaaaagatgtcagagatcaccagacaacttcttgagagctatgacattgaagatgtaaga
aacaggctctctctggaagatttggaacatttaaatgaggatggagaactttggtttgct
tatgaaggactaaagaaagcaacacgcgttttggagaaccatttccagtcccagaaggat
tgctatgaaaaggagattgaagctctgaacttcaaagtggtgcatctaagtcaggaaatc
aaccacctgcagaaattatttagagaagaaaatgacatcaatgaaagtatccgtcatgaa
gttaccaggctaacatcggaaaacatgatgatcccagactttaaacaacaaatttcagaa
ctggaaaaacagaagcaagatctcgaaatccgcctaaatgaacaaactgaaaccatgaaa
ggaaaactagaagaattgtcaaatcagttgaatcacaatcaagaagaagaaggaacacag
agcaagacctttatagaagcccaaaatgaaatacataccaaagagaaagagaagctgatg
gacaagattcaagaaattcaggaggccagtgagcacttgaggaaacaatctgaaactgaa
aatgaagtcaagagtagtttccagcagaaagcatctcgtctcactgtggagaagagggat
cttgaagaagagttagacatgaaggaaagagtgattaaaaagttacaagatcaagtgaag
actcttaccaagacaattgaaaaagccaatgacgtgcacctgtcctcaggacccaaggag
taccttggaatgctggaatacaagagagaagatgaggccaagctcattcaaaacctcatt
cttgacctgaagccccgcggtgtggtggtgaacatgatccccgggctgccagctcacatc
ctgttcatgtgtgtacgctacgcagactctctaaatgacgccgacatgctcaagtccctc
atgaacagcaccattaatggcatcaagcaggtggttaaggaacatttagaagactttgag
atgctgtccttttggctttccaatacctgtcatttcctcaattgcctgaagcagtacagt
ggagaagaggaattcatgaagcataatagtccacatcagaataagaattgcttgaacaat
tttgacctttcagaatacagacagattcttagtgatgtggctatacgaatatatcatcag
ttcattatcgtaatggaaaataacattcaaccaataatagtgccaggcatgctggagtac
gagagtctgcagggcatttctggcctgaagcccacaggcttccggaagcggtcctccagc
atagacgacacggatgcctacacgatgacgtccgtcctgcagcaactgagctatttctac
agcaccatgtgccagagtggcctggaccctgagatcgtgaggcaggcagtgaagcagctc
ttcttcttgatcggggcagtcaccctgaacagcctcttcctgcgcaaggacatgtgctcc
tgtagaaaagggatgcagataaggtgcaacatcagttacttagaagaatggcttaaagat
aagaatttacaaaacaacttggccaaggaaactttggagcctctctcacaggcagcatgg
ttgcttcaggtgaagaagaccaccgacagtgatgccaaggagatctacgaatgctgtacc
tctctgtctgctgtgcagatcataaagattcttaattcatacacacctatagatgacttt
gaaaaaagagtgactccatccttcgttcgcaaagtgcaggctctcctcagcagccgagag
gattcatcacacctgatgttggataccaaatacctctttcaagtcacatttccttttact
ccctctccacatgccctggaaatgatccagatccccagcagttttaagcttggctttctc
aataggttatag
DBGET
integrated database retrieval system
