Bubalus bubalis (water buffalo): 102396355
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Entry
102396355 CDS
T05912
Symbol
SMARCD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03082
ATP-dependent chromatin remodeling
bbub04714
Thermogenesis
bbub05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102396355 (SMARCD1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
102396355 (SMARCD1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
102396355 (SMARCD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbub03021
]
102396355 (SMARCD1)
03036 Chromosome and associated proteins [BR:
bbub03036
]
102396355 (SMARCD1)
Transcription machinery [BR:
bbub03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
102396355 (SMARCD1)
Chromosome and associated proteins [BR:
bbub03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
102396355 (SMARCD1)
PBAF complex
102396355 (SMARCD1)
GBAF(ncBAF) complex
102396355 (SMARCD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
DivIC
Motif
Other DBs
NCBI-GeneID:
102396355
NCBI-ProteinID:
XP_025139902
EnsemblRapid:
ENSBBUG00015020822
LinkDB
All DBs
Position
4:90481131..90493573
Genome browser
AA seq
515 aa
AA seq
DB search
MAARAGFQSVAPSGGAGAAGGAGAAAALGPGGTPGPPVRMGPAPGQGLYRSPMPGAAYPR
PGMLPGSRMTPQGPSMGPPGYGGNPSVRPGLAQSGMDQSRKRPAPQQIQQVQQQAVQNRN
HNAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKR
KLRIFISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKRKFSSFFKSL
VIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPR
LARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQRMKFSEIPQR
LHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIATL
DNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKVMTDVVGNSEEERRAE
FYFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccgggcgggtttccagtctgtggctccgagcggcggcgccggagccgcagga
ggggcgggtgcggcggctgccctgggcccgggcgggacaccggggcctccggtgcgaatg
ggcccggcgccgggtcaagggctctaccgctccccgatgcctggagcggcctatccgaga
ccaggtatgctaccaggcagccgaatgacacctcagggaccttccatgggaccccctggc
tatggggggaacccttcagtccgacctggcctggcccagtcagggatggaccagtcccgc
aagagacctgcgcctcagcagatccagcaggtccagcagcaggcggtccaaaatcggaac
cacaatgcaaaaaaaaagaagatggctgacaaaattctacctcaaaggattcgtgaactg
gtaccagaatcccaggcctatatggatctcttggcttttgaaaggaaactggaccagact
atcatgaggaagcggctagatatccaggaggccttgaaacgtcccatcaagcaaaaacgg
aagctgcgaattttcatttctaacactttcaatccggctaagtcagatgccgaggatggg
gaagggacggtggcttcctgggaacttcgggtggaaggacggctcctggaggattctgcc
ttgtccaaatatgatgccaccaaacaaaagaggaagttttcttctttttttaaatccttg
gtgatcgaactggacaaagacctgtatggaccagacaaccatctggtagaatggcacagg
accgccactacccaggagacggacggcttccaggtgaagcggccgggagacgtgaatgtg
cggtgcactgtcctgctgatgctggactaccagcctcctcagtttaaattagaccctcgt
ctggctcggctcctgggcatccacacccagacccgtccggtgatcattcaagcactgtgg
caatatattaagacacacaagctccaggacccacatgagcgggagtttgtcatttgtgac
aagtacctccagcagatctttgagtctcaacgtatgaagttttcagagattccccaacgg
ctccatgccttgcttatgccacctgagcccattatcattaatcatgtcatcagtgttgac
ccgaatgatcagaaaaagacagcttgttatgacattgatgtggaagtggatgataccttg
aagacccagatgaattcttttctgctgtctactgccagccagcaggagattgctactcta
gacaacaagatccatgagacaatagagactatcaatcagctgaagacccagcgggagttc
atgctgagctttgccagagaccctcagggtttcatcaatgactggcttcagtcgcagtgt
cgggacctcaaggtcatgactgatgtggtgggtaactcagaggaggagcgccgagcagag
ttctacttccagccttgggcccaggaggccgtgtgtcgatatttctactccaaggtgcag
cagagacgacaagaattagagcaagctctggggatccgaaatacatag
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integrated database retrieval system
