Bubalus bubalis (water buffalo): 102396412
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Entry
102396412 CDS
T05912
Symbol
HNRNPM
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein M isoform X9
KO
K12887
heterogeneous nuclear ribonucleoprotein M
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102396412 (HNRNPM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bbub03041
]
102396412 (HNRNPM)
Spliceosome [BR:
bbub03041
]
Common components
Common spliceosomal components
hnRNP proteins
102396412 (HNRNPM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HnRNP_M_NLS
RRM_10
RRM_MARF1
RRM_3
RRM_occluded
RBD_DEAH11
RRM_5
RRM_YTH1
Collagen_mid
Motif
Other DBs
NCBI-GeneID:
102396412
NCBI-ProteinID:
XP_006046774
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All DBs
Position
9:complement(94069970..94110006)
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AA seq
691 aa
AA seq
DB search
MAAGVEAAAEVAATEPKMEEESGAPGVPSGNGAPGPKGEGERPAQNEKRKEKNIKRGGNR
FEPYANPTKRYRAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAEGKSRGCAVVEFK
MEESMKKAAEVLNKHSLSGRPLKVKEDPDGEHARRAMQKAGRLGSTVFVANLDYKVGWKK
LKEVFSMAGVVVRADILEDKDGKSRGIGTVTFEQSIEAVQAISMFNGQLLFDRPMHVKMD
ERALPKGDFFPPERPQQLPHGLGGIGMGLGPGGQPIDANHLNKGIGMGNLGPAGMGMEGI
GFGINKMGGMEGPFGGGMENMGRFGSGMNMGRINEILSNALKRGEIIAKQGGGGGGGSVP
GIERMGPGIDRIGGAGMERMGAGLGHGMDRVGSEIERMGLVMDRMGSVERMGSGIERMGP
LGLDHMASSIERMGQTMERIGSGVERMGAGMGFGLERMAAPIDRVGQTIERMGSGVERMG
PAIERMGLGMERMVPAGMGAGLERMGPVMDRMATGLERMGANNLERMGLERMGANSLERM
GLERMGANSLERMGPAMGPALGAGIERMGLAMGGGGGASFDRAIEMERGNFGGSFAGSFG
GAGGHAPGVARKACQIFVRNLPFDFTWKMLKDKFNECGHVLYADIKMENGKSKGCGVVKF
ESPEVAERACRMMNGMKLSGREIDVRIDRNA
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaggggtcgaagcggcggccgaggtggcggcgacggagcccaaaatggaggag
gagagcggcgcgcctggcgtgccaagcggcaacggagctccgggcccgaaaggtgaagga
gaacgacctgctcagaatgagaagaggaaggagaaaaacataaaaagaggaggcaatcgc
tttgagccatatgccaatccaactaaaagatacagagccttcattacaaacatacctttt
gatgtgaaatggcagtcacttaaagacctggttaaagaaaaagttggtgaggtaacatac
gtggagctcttaatggacgctgaaggaaagtcaaggggatgtgctgttgttgaattcaag
atggaagagagcatgaaaaaagctgctgaagttctaaacaagcatagtctgagtggaaga
ccactgaaagtcaaagaagatcctgatggtgaacatgccaggagagcaatgcaaaaggct
ggaagacttggaagcacagtatttgtagcaaatctggattataaagttggctggaagaaa
ctgaaggaagtttttagtatggctggtgtggtggtccgagcagacattcttgaggataaa
gatggaaaaagtcgtggaataggcactgttacttttgaacagtccattgaagccgtgcaa
gctatatctatgtttaatggccagctgctgtttgacagaccaatgcacgtgaaaatggat
gagagggccttaccaaagggagattttttccctcctgagcgtccacaacaacttccccat
ggacttggtggtattggcatggggttaggaccaggagggcagcctattgatgccaaccat
ttgaataaaggcattggaatgggcaacctgggacctgcaggaatgggaatggaaggcata
ggatttggaataaataaaatgggaggcatggaaggaccctttggtggtggtatggaaaac
atgggtcgatttggatctgggatgaacatgggcagaataaacgaaatcctaagtaatgcc
ctgaagagaggagagatcattgcaaagcagggaggaggtggaggcggaggcagtgtccct
ggaattgagaggatgggccccggcattgaccgcatcgggggggccggcatggaacgcatg
ggcgcaggcctgggccacggcatggatcgtgtgggctccgagattgagcgcatgggcctg
gtcatggaccgcatgggctccgtcgagcgcatgggctctggcatcgaacgcatgggcccc
ctgggcctcgaccacatggcctccagcatcgagcgcatgggccagaccatggagcgcatc
ggctctggcgtggagcgcatgggtgccggcatgggctttggcctcgagcgaatggccgca
cccattgaccgtgtgggccagaccatcgagcgcatgggctctggtgtggagcgcatgggc
cctgccatcgagcgcatgggcctgggcatggagcgcatggtgcccgcaggcatgggggca
ggcctggagcgcatgggccccgtgatggatcgcatggccaccggcctggagcgcatgggc
gccaacaacctggagcgcatgggcctggagcgtatgggcgccaacagtctcgagcgtatg
ggcctggagcgcatgggcgccaacagcctagagcgtatgggtcctgccatgggcccggcc
ctgggcgctggcattgagcgcatgggcctggccatgggtggcggtggcggtgccagcttt
gaccgtgccatcgagatggagcgtggcaactttggaggaagtttcgcgggttcctttggt
ggagctggaggccatgcccctggggtggccaggaaggcctgccagatatttgtgagaaat
ctcccgtttgattttacatggaagatgctaaaagacaagttcaacgaatgcggccacgtg
ctgtatgccgacatcaagatggagaatgggaagtccaaggggtgcggtgtggttaagttt
gagtcgccagaggtggctgagagagcctgccggatgatgaatgggatgaagctgagtggc
cgagagattgatgttcgaatcgatagaaatgcttaa
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