Bubalus bubalis (water buffalo): 102396462
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Entry
102396462 CDS
T05912
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102396462
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbub03021
]
102396462
03036 Chromosome and associated proteins [BR:
bbub03036
]
102396462
Transcription machinery [BR:
bbub03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
102396462
Coactivators
SAGA/TFTC/STAGA complex
102396462
Chromosome and associated proteins [BR:
bbub03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
102396462
STAGA complex
102396462
TFTC complex
102396462
SAGA complex
102396462
SLIK complex
102396462
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
TFIID_NTD2
EIF3I
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_SCAP
NBCH_WD40
RMC1_N
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_Vps41
PEP5_VPS11_N
Beta-prop_WDR19_1st
Beta-prop_WDR75_2nd
PROPPIN
eIF2A
Beta-prop_DCAF12
WDR54
Motif
Other DBs
NCBI-GeneID:
102396462
NCBI-ProteinID:
XP_044792887
LinkDB
All DBs
Position
X:complement(10143248..10145165)
Genome browser
AA seq
607 aa
AA seq
DB search
MEEFHTEEMQTAVSSYLKRRQYRGADGPPKEGLRLSQSAQDMATSLAVQSESGCANTVSA
APCRADPQQYEVQFGRLRDFLMDSDSQHSHELMPLLYPLFVYLHLDLVQNSPKSTAESFY
SHFHGMFLQNASQKDVIEQLQTTQTIQDILSNFRLRAFLDSKYVVRLPEDCYNYLLCYLQ
SDNNTALYRVLAWHIHLDVQPAERIDYQLYASGGCSSGEGSCSSSEGGSSSGKGGSSRGQ
GSGQEPTDLPMYILQKEEDLDILQETIKCVQDGPPSLITIYSYAFYNTEQLLSTAEASPD
NKLLATGFNNSCIKLWSLTSKFKSKPHQIDVPNIHLPNDTIEVDEEDRTATEKKVLLGHC
GPVYSTRFLPDSSALLSCSEDTSIRYWDLESFTNTVLYQGHAYPVWDLDISPHNLFFASA
SYDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSLR
LFMGHCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLASGTLYKDLHGHTDDITSVTFSLDS
SLIASASMDNSVRIWDIKSKHNSTPADGSSSELLGVYTSQMSTVLNVQFMAGSRLLVTGI
REEHQEH
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggaggagtttcacaccgaggagatgcagacggccgtgtcctcctacctcaaacgccgg
cagtacaggggcgcggatggcccaccgaaggaaggcctgcgactgtcacagagcgcccag
gatatggctaccagcctcgcagtccagtcagaatctggttgtgccaacacagtgtctgca
gccccttgccgggcagacccccagcaatatgaagtacagtttggacggctgcgggatttt
ctcatggactctgactcccagcatagccatgaactgatgcctctcctctaccctctcttt
gtctacctccatctcgacctggtccagaacagtccaaagagcacagcggaaagcttttac
agccacttccatggaatgtttctccagaacgccagccagaaggacgtcatagagcagctc
cagaccacccagaccatccaagacatcctgtctaacttccggctgcgggccttcctggac
agcaagtacgtggttcgtctgccagaagactgctacaactaccttctctgctacctccag
agtgacaacaacactgcgctgtacagagtcctcgcctggcacatccacctggacgtgcag
cccgccgagaggatagactaccagctctatgccagcggtggctgctccagcggcgagggc
agctgctccagcagcgaaggcggctcctccagcggcaagggcggctcctccagaggccag
ggcagcggccaggagcccaccgacctgcccatgtacatcctgcagaaagaggaggatctg
gacatccttcaggagaccatcaagtgcgtccaggatggccccccctccctcatcaccatc
tactcctacgccttctacaacactgagcagctgctgagcacggcggaggcctccccggac
aacaagctgctcgccacgggctttaacaactcctgtataaaactgtggagtctgacttcc
aagtttaaatccaagccccatcaaatagacgtgcccaacatccacttgcctaatgatacc
atcgaggtcgatgaggaggacaggacagccacggagaagaaggttctcctgggacactgc
gggccagtgtacagcaccaggttcctcccggacagctcggcactgctctcctgctctgaa
gacacgtccatcaggtactgggacctggagagcttcactaacaccgtgctgtaccagggc
catgcctaccctgtgtgggacctggacatcagcccgcacaacctgttctttgcaagcgcg
tcctacgaccgcacggcgcggctgtggtcgtttgatcggacatacccactgcgaatctac
gctgggcacctggcggatgtggactgtgtcaagttccaccccaattcaaactatttagcc
acgggctcgacagacaagacggtgcggctttggagtgcccagcaggggaactctctgaga
ctcttcatgggccactgcggccccgtgcgctgtctggccttttcccccaatggtcagtac
ctggtgtcggcgggtgaggaccagctgctgaagctgtgggacctggcatctgggaccctc
tacaaagacctacacggccacacggatgacatcaccagcgtcaccttcagcctggacagc
agcctgatcgcgtcagcatccatggataactctgtgcgtatctgggacatcaagagcaag
cacaacagcacgcccgccgatggctcgtccagtgagctcctgggcgtctacaccagccag
atgagcactgtgctgaatgtgcagttcatggctggcagccgcctgctggtgaccggaatc
agagaagaacatcaggaacactga
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integrated database retrieval system
