Bubalus bubalis (water buffalo): 102396584
Help
Entry
102396584 CDS
T05912
Symbol
PRPF4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4 isoform X1
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102396584 (PRPF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bbub03041
]
102396584 (PRPF4)
Spliceosome [BR:
bbub03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
102396584 (PRPF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
PRP4
Beta-prop_EML
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_Vps41
WD_LRWD1
Beta-prop_IFT140_1st
WD40_like
Ge1_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
102396584
NCBI-ProteinID:
XP_006061308
LinkDB
All DBs
Position
3:164284968..164305243
Genome browser
AA seq
524 aa
AA seq
DB search
MASTRPSSTVQQATKTKAPDDLVAPVVKKPHIYYGSLEEKERERLAKGESGLLGKEGLKA
GIEAGNINITSGEVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEP
ITLFGEGPAERRERLRNILSVVGTDALKKTKKDDEKSKKSKEEYQQTWYHEGPNSLKVAR
LWIANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCH
FSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLAS
CAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEI
LHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPN
GYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWT
HPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggcttccacacgaccctcctccacggtacagcaggcaaccaaaactaaggcaccagat
gacttagtagctcctgttgtgaagaaaccacacatctattatggaagtttggaagagaag
gagagggagcgtctggccaaaggagaatctgggcttttgggaaaagaaggactcaaagca
ggaattgaagcaggaaacattaacataacctctggagaagtgtttgaaattgaagagcac
atcagtgagagacaggctgaagtgttagcagagtttgagagaaggaagcgagcccggcaa
atcaacgtttccacagatgactcagaggtcaaggcttgccttagagctttgggggaaccc
atcacactttttggagaaggtcctgctgaaagaagagaaaggttaagaaatattctctca
gtggtcggtactgatgccttaaaaaagaccaaaaaagatgatgagaaatcaaagaagtcc
aaagaagagtatcagcagacctggtaccatgaaggaccaaacagcctgaaggttgctaga
ctgtggattgctaattattcactgcccagggcaatgaaacgcttagaagaggcccgtctt
cataaagagattcctgagacaactagaacctcccagatgcaagagctgcacaaatctctc
cgatctttgaataatttctgcagtcagattggggatgatcggcctatctcctactgtcac
ttcagtcccaattccaaaatgctggccacagcctgttggagtgggctttgcaagctctgg
tctgttcccgattgcaacctccttcacactcttcgaggccataacacaaacgtgggagcg
atcgtattccatcccaaatccacagtctccttggaccaaaaagacgtcaatctggcctct
tgtgctgctgacggttctgtgaagctgtggagccttgacagtgatgaaccggtggcagat
attgaagggcacacagtgcgtgtggcccgtgtgatgtggcatccatcaggacgtttctta
ggtaccacctgctatgaccgatcatggcgcttatgggatttggaagctcaagaggagatc
ctgcaccaggagggccacagcatgggtgtgtatgacattgccttccatcaagatggctct
ttggctggcactgggggactggatgcatttggtcgagtttgggacctgcgcacaggacgt
tgtatcatgttcctagaaggtcacctgaaggaaatatatggaataaatttctcccccaat
ggctaccacattgcaaccggcagtggcgacaacacctgcaaggtgtgggacctccgacag
cgacgttgtgtctacaccattcctgcccatcagaacttagtgacaggtgtcaagttcgag
cctatccatgggaatttcttgctcactggtgcctatgataacacagccaagatctggact
cacccaggctggtcccctctgaagactctggccggccacgaaggcaaagtgatgggccta
gacatttcctccgatgggcagctcatagccacttgctcctatgacaggaccttcaagctc
tggatggctgaatag
DBGET
integrated database retrieval system
