Bubalus bubalis (water buffalo): 102396594
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Entry
102396594 CDS
T05912
Symbol
VPS35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102396594 (VPS35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bbub04131
]
102396594 (VPS35)
Membrane trafficking [BR:
bbub04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
102396594 (VPS35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
KH_GLD-3_1st
Imm5
FerA
Motif
Other DBs
NCBI-GeneID:
102396594
NCBI-ProteinID:
XP_006062828
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All DBs
Position
18:complement(14641507..14669166)
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AA seq
796 aa
AA seq
DB search
MPTTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVK
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEPTDEETTGDISDSM
DFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQ
IVLTGILEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIII
ALIDRLALFAHREDGPGIPTDIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMK
CYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLKLKH
FHPLFEYFDYESRKSMSCYVLSNVLDYNTEIVSQDQVDSIMNLVSTLIQDQPDQPVEEPD
PEDFADEQSLVGRFIHLLRSEDPDQQYLILNTARKHFGAGGNQRIRFTLPPLVFAAYQLA
FRYKENSKVDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHE
TVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKL
LKKPDQGRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSLQVQLF
IEILNRYIYFYEKENDAVTIQVLNQLIQKIREDLPNLESSEETEQINKHFHNTLEHLRLR
RESPESEGPIYEGLIL
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgcctacaacacagcagtcaccgcaggatgagcaggaaaaactcttggatgaagccata
caggctgtgaaggtccagtcattccagatgaagagatgcctggacaaaaacaagcttatg
gatgctctgaaacatgcttctaatatgcttggtgaactgcggacttctatgttatcacca
aagagctactatgaactttatatggctatttctgatgaactgcactacttggaagtttac
ctgacagatgaatttgctaaaggaagaaaagtggcagatctctatgaacttgtacagtat
gccggaaacattatcccaaggctttatctgttgatcacagttggagttgtatacgtcaag
tcatttcctcagtccaggaaagatattttgaaagatttggtagaaatgtgccgtggtgtg
cagcatcccttgagaggtctatttcttcgaaattatctacttcagtgtaccagaaacatc
ttacctgatgaaggggagccaacagatgaagaaacaactggtgatatcagtgattccatg
gattttgtcctactcaactttgcagaaatgaacaagctctgggttcgaatgcagcatcag
ggacatagccgagatagagaaaaaagagaacgagaaagacaagaactgagaattttagtg
ggaacaaatttggtgcgccttagtcagttggaaggtgtaaatgtggaacgttacaaacag
attgttttgaccggcatattggagcaagtggtgaattgcagagatgctttggctcaggaa
tatctcatggagtgcattattcaggttttccctgatgaattccaccttcaaactttgaat
ccttttcttcgggcctgtgctgagttacaccaaaatgtaaatgtgaaaaacataatcatt
gctttaattgatagattagctttatttgctcaccgtgaagatggacctggaatcccaaca
gatattaaactttttgacatattttcacagcaggtggctacagtaatacagtctagacaa
gacatgccttcggaggatgttgtatctttacaagtctctctcattaatctcgctatgaag
tgttatcctgatcgtgtggactatgttgataaagttctagaaacaacagtggagatattt
aataagctcaaccttgaacatattgctaccagtagtgcagtttcaaaggagctcaccaga
cttttgaagattcctgttgacacttacaacaatattttaacagtcttgaaattaaaacat
ttccacccactctttgagtattttgactatgagtccagaaagagcatgagttgttacgta
cttagtaatgttctagattataatacagaaattgtctctcaagaccaggtggattccata
atgaatttggtatctacactgattcaggatcagccagatcaacctgtagaagaacctgac
ccagaggactttgctgatgagcagagccttgtgggcagattcattcatcttctacggtct
gaggaccctgatcaacagtacttgattttaaacacagcacgaaaacattttggagctggt
ggaaatcaacggattcgcttcacactgccacctttggtatttgcagcttaccagctggct
tttcgctacaaagaaaattctaaagtggatgacaaatgggaaaagaaatgccagaagatt
ttttcatttgctcaccagactattagtgctttgatcaaagcagagctggcagaattaccc
ttaagactttttcttcaaggggctctagctgctggagaaattggttttgaaaatcatgaa
acagtagcatatgaatttatgtcccaggcattttctctgtacgaagatgaaatcagtgat
tccaaagcacaactggctgccatcaccttgatcattggtactttcgagaggatgaagtgc
ttcagtgaagaaaaccatgaacccttgaggactcagtgtgctcttgctgcatccaaactt
ctgaagaagcctgatcagggccgagctgtgagcacctgtgcacatctcttctggtctggc
agaaacacagacaaaaacggagaggagctgcatggaggcaaaagggtaatggaatgccta
aagaaagctctgaaaatagcaaatcagtgcatggacccctctctacaagtgcaacttttt
atagaaatcctgaacagatatatctatttttatgaaaaggaaaatgatgcggtcactatt
caggttttgaatcagcttatccaaaagattcgagaagacctcccaaatcttgaatccagt
gaagaaacagagcagattaacaaacattttcataacacactggagcacttgcgcttgagg
cgggaatcaccagaatctgaagggccaatttatgagggtctcatcctttaa
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