Bubalus bubalis (water buffalo): 102396678
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Entry
102396678 CDS
T05912
Symbol
SYDE2
Name
(RefSeq) rho GTPase-activating protein SYDE2 isoform X1
KO
K20655
Rho GTPase-activating protein SYDE
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bbub04131
]
102396678 (SYDE2)
Membrane trafficking [BR:
bbub04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
102396678 (SYDE2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2_SYDE
RhoGAP
C2
PH_SSH1-like_1st
Motif
Other DBs
NCBI-GeneID:
102396678
NCBI-ProteinID:
XP_006080535
LinkDB
All DBs
Position
6:58656035..58697817
Genome browser
AA seq
1438 aa
AA seq
DB search
MRSAAAPPSPTLAAAELCQVCEEPERASVGHGEPPPPPPPRAQLSGERGSEFSPHRGRAW
LLRQRGMTDPLRKTLSRLRGRRGPHATGRLGLRAAAAATVAASSAAEGDAGGTRDAPSGE
RASGARPNLERPQPSPQAWGPEAGVPGGRPERSGALGPALRGWKEATPPGGGLTRASLYA
PPGSEGSGEDEEEDADYYENLPGDFQPASKPDGAEAELWPPPPLAVGSSPGAEGGRLETG
RLQTQLREAYYLLIQAMHDLPPDSGARRGDRGWADRGCPAGARAPGQPPSPCGAADRRAC
PRDWERGGGGRPWQQVSPPRSPPGESGGGRPRTPRMRLSCSRSLDSLQVGAKTPPFQRWP
SDSWIWCGTRGEPDEPPPRGGGMHGWSGGSARAAAPSGPRLPRSEDPGRSTGSRGKGDGQ
EGLPFLRPPAVTVKKLQKWMYKGRLLSLGMKGRARRTPPDGTGAQATASNLGALKMRESQ
VLSVPPDQRITLTDLFENVCESSMKRNELKDLKDNTGFRGHKPLNSITVSKKRNWLYQST
VRSFNLEEENKKCQDISHLSVSPISLPKQQLSQPFLKSPEEYCTYMVCNATNPSLSRNCS
LDFNEENDADDEGEIWYNPIPEDDDFSISNALSFGETDSAVLKFPDVNLRVLSGSNLMKA
EQYTEDSLCCSEHTGDVQTTQSHEISPVDSICPAEFVQRYKQRHRYKMQERIIIDDSPML
KSPFSGPGSVAATNKTDLGVMEPSSPSPSPVKKGSSMNWSFPDKIKSPRTVRKLSMKMKK
LPELSRKLSVKGTLNYVNSPDNTPSLSKCDCQEIHHAVILPSGNTTTAAKRNVISRYHLD
TSVSSQPSYQKKTSVSSKYSCKGGYLSDGDSPELIAKSSKYGFENKFAKGKDIIPNSSSK
NELDIDAFRHYSFSDQPKCSQYISGLMSVHFYGAEDLKPPRIDSKDVFCAIQVDSVNKAR
TALLTCRTTFLDMDHTFNIEIENAQHLKLVVFSWEPTPRKNRVCCHGTVVLPTLFRVTKT
HQLAVKLEPRGLIYVKVTLLEQWENSLHGLDISREPVVFGVDIQKVVEKENIGLMVPLLI
QKCIMEIEKRGCQVVGLYRLCGSAAVKKELREAFERDSKAVGLCESQYPDINVITGVLKD
YLRELPSPLITKQLYEAVLDAMAKNPLKMSSNGCENDPGDSQYTFGLLDCLPDVEKATLM
MLLDHLKLVASYHDVNKMTCQNLAVCFGPVLLSQRQETSTHNNRVFTDSKELATALDFKK
HIEVLHYLLQLWPVQRLTIKESANSLFPEQKSSLNYLRRKKERPYLLNLSGTESSGVLRP
RQTRLDSPLSNRYAGDWSSCGENFLNTKENLNTVDYDDVPSEDRENGENCSKIYEPDITT
EQPTPLSQECTFQTYLTVQTMESRVGRKVNLKDLQESIDTLIGNLESELNKSKLNMSV
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
atgcgctctgcggcggcgccgccctcccccacccttgccgcggcagagttatgccaagta
tgtgaggagcccgagagggccagcgtcggtcatggggagccgccgccgccgccgcctccg
cgagcgcagctttctggcgagcggggttccgagttctccccgcaccgggggcgagcctgg
ctgctgaggcagagagggatgacggaccctctgaggaaaacgctgtccaggctccggggg
agacggggtccccacgccaccggacggctcggactccgggcggccgcagcagccaccgtg
gcggcctcttcggctgccgagggagacgcgggtggtacccgggacgccccctcaggcgag
cgtgccagcggagctcggccgaacctggagcggccccagccgtcgcctcaggcgtggggt
cctgaggcgggggtcccgggagggcggccggagaggtcgggggcgctcgggcctgcgctg
cgcggctggaaggaggccacccccccgggcggcgggctcactcgtgcctctctgtacgcc
ccgccgggctccgagggcagcggagaggacgaggaggaagacgccgactactacgagaac
ctgccgggagacttccagcctgcatccaagcctgatggggcggaggcggagctgtggccc
ccgcctcccctggccgtgggctcctccccgggggcggagggcggccgcctggagacaggc
aggctgcagacccagttgcgagaggcctattatttgctgatccaggccatgcacgacctg
ccccctgactccggcgcgcggcggggcgaccggggctgggcagatcgcggttgccctgcg
ggagcccgggctccgggccagccgccttccccctgcggcgcggcggaccgccgagcctgc
ccccgagactgggagcgcggaggcggcggccgcccttggcagcaggtgtccccgccccgg
tcgcctcctggggagtcggggggaggccgcccacggactcctcggatgcggctgtcctgc
agcagaagtctcgacagcctccaggtgggtgccaaaacgcctcccttccagcggtggccg
agcgacagctggatctggtgcggtacgcgcggggagccagacgagccgccgccacgtgga
ggcgggatgcacggctggagcggaggcagcgcccgggccgcggcgccctcggggccccgg
cttcccagatccgaggaccctggccgctccacgggaagccgcggcaaaggggacggccag
gaggggctccccttcctcaggccgcccgcggtgacagtcaagaagctgcagaagtggatg
tataaaggacgtctgctgtccttgggaatgaagggtcgggcccgtaggacaccccccgat
ggcacgggtgctcaggcaaccgcttcaaatctgggcgctttgaaaatgcgggaaagccag
gtcctgtcggtgcctccagaccaaagaattacgctgacagatttatttgaaaatgtctgt
gagtcttcaatgaagagaaatgaacttaaggatctgaaggataatactggcttcaggggt
cataagccacttaacagcatcactgtgtcaaagaaacgcaattggctatatcaaagtact
gtgagatcttttaatttggaagaagaaaataagaaatgccaagatataagtcatttatct
gtttcacccatttctctacctaaacagcagttgtcacaaccttttctcaaatcacctgaa
gaatattgtacgtatatggtgtgtaatgctacaaatccttcattatcaagaaactgttca
ttagactttaatgaggaaaatgatgcagatgatgaaggagaaatatggtacaaccccatt
cctgaggatgatgacttcagtatttcaaatgccttgagttttggtgagacagactctgcg
gttctgaagtttcctgatgtcaatttgagagtgttatctggcagtaacctaatgaaagca
gagcagtacactgaagactcgctgtgctgttcggaacacacaggcgatgttcagaccaca
cagtcacacgagataagtcctgtagattccatctgtcccgcagagtttgtgcagcggtac
aagcaaaggcatagatacaagatgcaagaacgtataattatagatgacagtcccatgttg
aaatctcctttttcaggtcctgggagtgtagctgctacaaacaagactgatttgggagtt
atggaaccatcttcaccaagccctagccctgtgaaaaaaggcagttcaatgaattggtct
ttcccggataaaataaagtctccacgaaccgtgaggaaactttccatgaaaatgaaaaag
ttgccagaacttagccgaaaactgagtgttaaaggaaccttgaattatgtaaacagtcca
gacaatactccttctttgtctaaatgtgactgtcaagagattcatcatgctgttattcta
ccttctgggaatacaaccacagctgctaagaggaatgtgataagtcggtaccatcttgat
accagtgtgtcttctcagcccagctatcagaagaaaacctccgtgagttctaagtattcc
tgcaaaggtggttacctcagtgatggagattcacctgaactgatagccaaatctagcaaa
tatggattcgaaaacaaatttgcaaaaggaaaagacataattccaaatagcagcagcaag
aatgaactagacattgatgcttttagacattacagcttttctgatcaacctaagtgttca
cagtacatatctgggctcatgagtgtgcacttctatggtgctgaggatttaaaaccacct
cggatagactcaaaagatgtcttttgcgcaattcaggttgattcagtgaacaaagccaga
acagctttgctcacatgtcgaacaacgtttttagacatggatcacactttcaacatagaa
attgaaaatgcacagcatttgaaattagtagtgtttagttgggaacccactccaagaaaa
aaccgagtgtgttgtcatggaactgttgttcttcccaccttattccgagtgacaaagaca
catcaattggctgtcaaacttgaacctagaggtcttatttacgtgaaagtgactcttttg
gaacagtgggagaattcacttcatgggctagatataagtcgagaaccagtagtatttggt
gttgatattcaaaaagttgtagagaaagaaaatataggcttgatggtaccactcctgatt
cagaaatgtattatggaaattgaaaagagaggctgtcaggtagtaggcctataccgatta
tgtggctcggcagcagtcaagaaagaacttcgagaggcttttgagagggatagcaaagct
gttggtctgtgtgaaagccaatacccagatataaatgtaataacaggtgttcttaaggat
tatttaagagaacttccttctcctctgataacaaagcagctttatgaggctgtattagat
gcaatggcaaaaaatcctttgaaaatgtcatcaaatggttgtgagaatgatccaggtgat
tctcagtacacttttggccttctggattgtctgcctgatgttgagaaggcaactctaatg
atgttgttggatcatttgaaattggtggcttcttatcatgatgtgaataagatgacctgc
caaaacttggctgtgtgctttggaccagtattattaagtcagaggcaagaaacttccacc
cataacaacagagtctttactgattccaaggaacttgcgactgctttggattttaaaaaa
catattgaagttcttcactacttacttcaactctggccagtgcaacgtttaactatcaaa
gaatcagcaaacagtttgttcccagagcagaagtcttctctaaattatttgaggcggaag
aaagaacgaccttacttgttaaatttgagtggtactgaatcatcaggagtactcaggcca
aggcaaaccagactagacagtccactcagtaatcgttatgcaggagactggagcagctgt
ggagaaaactttttaaatacgaaagaaaatttaaatactgtggattatgatgatgtccct
tctgaagacagagaaaatggagaaaactgtagcaaaatatatgagccagacatcacgact
gaacagccaactcctctgtcccaagagtgcacgtttcagacgtacttgacagtgcagaca
atggagtctagagtgggccgaaaagtcaacctcaaagatctacaagaaagtattgatact
ttgattggaaatctagagagtgaactcaacaaaagcaagctcaatatgagtgtttaa
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