Bubalus bubalis (water buffalo): 102396741
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Entry
102396741 CDS
T05912
Symbol
GSPT1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102396741 (GSPT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbub03019
]
102396741 (GSPT1)
03012 Translation factors [BR:
bbub03012
]
102396741 (GSPT1)
Messenger RNA biogenesis [BR:
bbub03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
102396741 (GSPT1)
Translation factors [BR:
bbub03012
]
Eukaryotic type
Release factors
102396741 (GSPT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
102396741
NCBI-ProteinID:
XP_006073684
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All DBs
Position
24:31631212..31660866
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AA seq
637 aa
AA seq
DB search
MDPGSGGGGGGGGGGSSSSSDSAPDCWDQADMEAPGPGPCGGAGGPLAAAAAEAQREHLS
AAFSRQLNVNAKPFVPNVHAAEFVPSFLRGPAQSPASPAGAAANNHGAGSGAGGPSAPVE
SSQEEQSLLCEGSNSAVSMELSEPIVENGETEMSPEESWEHKEEISEAEPDGGSLGDGRP
AEESAQEMMEEEEEIPKPKSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVD
KRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGH
KSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKM
DDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCPWYIGL
PFIPYLDNLPNFNRSVDGPIRLPIVDKYKDMGTVVLGKLESGSICKGQQLVMMPNKHNVE
VLGILSDDVETDSVAPGENLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDAQIVIIEH
KSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGT
ICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggatcccggcagtggtggcggtggcggcggcggcggcggcgggagcagcagcagcagc
gactcagcgcccgactgctgggaccaggcggacatggaagctcccgggccgggcccgtgt
ggcggcgccggcggccccttggcggcggcggcggccgaggcccagcgtgagcacctcagt
gcggccttcagccggcagctcaacgtcaacgccaagcccttcgtgcccaacgtccacgcc
gccgagttcgtgccgtccttcctgcggggcccggcccagtcgccggcatccccagctggc
gccgccgccaacaaccacggagccggcagcggcgcgggaggcccttcggcacctgtggaa
tcttctcaagaggaacagtcattgttgtgtgaaggttcaaattcagctgttagcatggaa
ctttcagaacctattgtagaaaatggggagacagagatgtccccagaagaatcatgggag
cacaaagaagaaataagtgaagcagagccagatggtggttctttgggagatggaaggcct
gcagaggaaagtgcccaggaaatgatggaggaggaagaggaaataccaaaacctaaatct
gtggttgcgccgccaggagctcctaagaaggaacacgtaaatgtcgtattcattgggcac
gtagatgctggcaagtcaaccattggaggacaaataatgtatttgactggaatggttgac
aaaaggacacttgagaaatatgaaagagaagctaaagaaaaaaacagagaaacttggtac
ttatcttgggccttagacacaaatcaggaagaaagagacaagggtaaaacagtagaagtg
ggtcgtgcctattttgaaacggaaaagaagcattttacaattctagatgcccctggccac
aagagttttgtcccaaatatgattggtggtgcttctcaagctgatttggctgtactggta
atctctgccaggaaaggagagtttgaaactggatttgagaaaggaggacagacgagagaa
catgccatgctggcaaagacggcaggcgtcaaacacttgattgtgctcattaataagatg
gacgacccaacagtgaattggagcaatgagagatatgaagaatgtaaagagaaactggtg
ccgtttttgaaaaaagttggctttaatcccaaaaaggacattcacttcatgccatgctca
ggactgacgggagcaaatcttaaggagcaatcagatttctgtccttggtacattggatta
ccatttattccatatctggataatttgccaaacttcaatagatcagttgatggaccaatc
aggctgccaattgtggataagtacaaggatatgggcactgtggtcctgggaaagctggaa
tcaggatctatttgtaaaggccagcagcttgtgatgatgccaaacaagcacaatgtggaa
gttcttggaatcctttctgatgatgtggaaaccgattctgtagccccaggtgaaaacctc
aaaatcagactgaaaggaattgaagaggaggagattcttccagggttcatactttgtgat
cctaataatctttgtcattctggtcgcacatttgatgcccagatagtgattatagagcac
aagtccatcatctgcccaggttataatgcggtgctgcatatccatacctgtattgaagaa
gtcgaaataacagccttaatctgcttggtagacaagaaatcaggagaaaaaagtaagact
cgaccccgttttgtgaaacaggatcaagtgtgcattgcccgcttgaggacagcaggaacc
atctgccttgagacctttaaagacttccctcaaatgggtcgctttactttaagagatgag
ggtaagaccattgcaattggaaaagttctgaaactggttccagagaaagactaa
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