Bubalus bubalis (water buffalo): 102396822
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Entry
102396822 CDS
T05912
Symbol
TOP3B
Name
(RefSeq) DNA topoisomerase 3-beta-1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03440
Homologous recombination
bbub03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102396822 (TOP3B)
03460 Fanconi anemia pathway
102396822 (TOP3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbub03032
]
102396822 (TOP3B)
03400 DNA repair and recombination proteins [BR:
bbub03400
]
102396822 (TOP3B)
Enzymes [BR:
bbub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
102396822 (TOP3B)
DNA replication proteins [BR:
bbub03032
]
Eukaryotic type
DNA Topoisomerases
102396822 (TOP3B)
DNA repair and recombination proteins [BR:
bbub03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
102396822 (TOP3B)
FA (Fanconi anemia) pathway
102396822 (TOP3B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
EBNA2_Core
Motif
Other DBs
NCBI-GeneID:
102396822
NCBI-ProteinID:
XP_006065664
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All DBs
Position
17:complement(946002..962453)
Genome browser
AA seq
861 aa
AA seq
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MKTVLMVAEKPSLAQSIARILSRGSMSSRKGLNGTCSVHEYSGSFAGQPARFKMTSVCGH
VMTLDFLGKYNKWDKVDPAELFSQAPTEKKEANPKLNMVKFLQVEGRGCDCIVLWLDCDK
EGENICFEVLDAVLPVMNQAHSGEQTVFRARFSSITDTDICTAMARLGEPDHNEALSVDA
RQELDLRIGCAFTRFQTKYFQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETY
WVLQAKVDVDKDRSLLLGWDRVRVFDREIAQMFLNMTKLEKEAQVEATSRKEKAKQRPLA
LNTVEMLRVASSALGMGPQHAMQIAERLYTQGYISYPRTETTHYPESFDLKGPLRQQANH
PYWADTVKQLLAEGINRPRKGHDAGDHPPITPMKSATEAELGGEAWRLYEYITRHFIATV
SHDCRYLQSSISFRIGPERFTCTGKTVISPGFTEIMPWQSVPLEESLPTLQKGDTLAVAE
VKLLEKQTSPPDYLTEAELITLMEKHGIGTDASIPVHINNICQRNYVVVESGRRLKPTNL
GIVLVHGYYKIDAELVLPTIRSAVEKQLNLIAQGRADFRQVLGHTLDVFKRKFHYFVDSI
AGMDELMEVSFSPLAATGKPLSRCGKCHRFMKYIQAKPSRLHCSHCDETYTLPQNGTIKL
YKELRCPLDDFELVLWSSGSRGKSYPLCPYCSNHPPFRDMKKGTGCNECTHPSCQHSLSM
LGIGQCVECESGVLVLDPTSGPKWRVACNRCNVVAHCFENAHRVRVSAETCAACEAALLD
VDFNKAKSPLPGDGTQHTGCVFCDPIFQELVELKHAASCHPMHRGPGRRQGRGRGRGRRP
AGKPGPRRPKDKMSALAAYFV
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccgtgctcatggtggccgagaagccgtccttggcccagtccatcgccaggatc
ctctctcgaggcagcatgtcctcgcgcaaagggctgaacgggacctgctcggtgcacgaa
tacagcgggtccttcgcgggccagccggcccgcttcaagatgacgtctgtctgcggccac
gtgatgacgctggacttcctggggaagtacaacaagtgggacaaggtggaccccgccgag
ctgttcagccaggccccgacggagaagaaggaggccaaccccaagctgaacatggtgaag
ttcctgcaggtggagggcaggggctgcgactgcatcgtgctgtggctggactgcgacaag
gagggcgagaacatctgcttcgaggtgctggacgcggtgctgcccgtcatgaaccaggcc
cacagcggcgagcagacagtgttccgggcccgcttcagctccatcacggacacggacatc
tgcactgccatggcccgcctgggtgagcccgaccacaacgaggcactctcggtggacgcg
cggcaggagctggacctccgcatcggctgcgccttcacgaggttccagactaaatacttc
caggggaaatatggcaacctggacagctcgctcatctccttcgggccatgccagaccccc
acgctggggttctgtgtggagaggcatgacaagatccagtccttcaagccggagacctac
tgggtgctgcaggccaaggtggatgttgataaggaccgctccctcctcctgggctgggac
cgtgtgcgcgtgttcgaccgggagatcgcacagatgttcctgaacatgaccaagctcgag
aaggaggcccaggtggaggccacaagcaggaaggagaaggccaagcagcggccactggcc
ctgaacaccgtggagatgctgcgtgtggccagctctgccctgggaatgggcccgcagcac
gccatgcagatcgccgagcggctctacacgcagggctacatcagctacccgcgtaccgag
accacccactaccccgagagctttgacctgaaggggcctctgcggcagcaggccaaccac
ccctactgggctgacacggtgaagcagctcttagcagaaggtatcaaccgcccacggaaa
ggccatgacgctggcgaccatccccccatcacccccatgaagtctgccacggaagccgag
ttagggggcgaggcctggcggctctatgaatacatcacccggcacttcatcgccaccgtc
agccacgactgcaggtacctgcagagcagcatctccttccggatcgggcccgagcgcttc
acctgcacgggcaagaccgtcatctccccaggcttcacagagatcatgccctggcagagc
gtgcccctggaggagagcctgcccaccctccagaagggcgacaccctggccgtggctgag
gtcaagctgctggagaagcagacgagcccgccggactacctgaccgaggctgagctcatc
accctcatggagaagcacggcatcgggacggacgccagcatccccgtgcacatcaacaac
atctgccagcgcaactacgtggtcgtggagagcgggcgccgactcaagcccaccaacctc
ggcattgtcctggtgcatggctactacaagatcgacgccgagctggtgctgcccaccatc
cgcagcgccgtggagaagcagctgaacctgatcgcgcagggcagagccgactttcgccag
gtcctgggccacaccctggacgtcttcaagaggaagttccattacttcgtggactccatt
gcgggcatggatgaactgatggaggtgtccttctcgcccctggcggccacgggcaagccc
ctctcccgctgcgggaagtgccaccggttcatgaagtacatccaggccaagccgagccgc
ctgcactgctcgcactgcgacgagacctacacgctgccccagaacggcaccatcaagctc
tacaaggagctgcgctgcccgctggacgacttcgagctggtcctgtggtcgtcgggctcc
aggggcaagagctacccgctgtgcccctactgctccaaccacccgcccttccgggacatg
aaaaagggcacgggctgcaacgagtgcacgcaccccagctgccagcactcgctcagcatg
ctgggcatcggccagtgcgtggagtgcgagagcggcgtgctggtgctcgaccccacctcc
ggccccaagtggcgcgtggcctgcaacaggtgcaacgtggtggcccattgcttcgagaac
gcccaccgcgtgcgcgtgtccgccgagacgtgcgccgcctgcgaggccgccctgctggac
gtggacttcaacaaggccaagtccccgctgccgggcgacggcacgcagcacacgggctgc
gttttctgcgaccccattttccaggagctggtggagctgaagcacgcagcctcctgccac
cccatgcaccgcgggcccgggcggaggcagggccggggccggggccggggccggaggccg
gcggggaagccgggtccccgccggcccaaggacaagatgtcagccctggccgcctacttc
gtgtga
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