Bubalus bubalis (water buffalo): 102396902
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Entry
102396902 CDS
T05912
Symbol
PSMC1
Name
(RefSeq) 26S proteasome regulatory subunit 4
KO
K03062
26S proteasome regulatory subunit T2
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03050
Proteasome
bbub05010
Alzheimer disease
bbub05012
Parkinson disease
bbub05014
Amyotrophic lateral sclerosis
bbub05016
Huntington disease
bbub05017
Spinocerebellar ataxia
bbub05020
Prion disease
bbub05022
Pathways of neurodegeneration - multiple diseases
bbub05165
Human papillomavirus infection
bbub05169
Epstein-Barr virus infection
bbub05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
102396902 (PSMC1)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
102396902 (PSMC1)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
102396902 (PSMC1)
05165 Human papillomavirus infection
102396902 (PSMC1)
09164 Neurodegenerative disease
05010 Alzheimer disease
102396902 (PSMC1)
05012 Parkinson disease
102396902 (PSMC1)
05014 Amyotrophic lateral sclerosis
102396902 (PSMC1)
05016 Huntington disease
102396902 (PSMC1)
05017 Spinocerebellar ataxia
102396902 (PSMC1)
05020 Prion disease
102396902 (PSMC1)
05022 Pathways of neurodegeneration - multiple diseases
102396902 (PSMC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
bbub03051
]
102396902 (PSMC1)
Proteasome [BR:
bbub03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
102396902 (PSMC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_2
AAA_22
nSTAND3
DUF815
AAA_5
RuvB_N
AAA_16
AAA_28
AAA_25
AAA_14
AAA_3
RNA_helicase
ATPase
IstB_IS21
TIP49
AAA_11
NPHP3_N
Mg_chelatase
AAA_33
AAA_7
AAA_24
Parvo_NS1
NB-ARC
PhoH
NACHT
ABC_tran
Prot_ATP_ID_OB_N
AAA_18
AAA_30
TsaE
Motif
Other DBs
NCBI-GeneID:
102396902
NCBI-ProteinID:
XP_006042318
LinkDB
All DBs
Position
11:complement(1384261..1397219)
Genome browser
AA seq
440 aa
AA seq
DB search
MGQSQSGGHGPGGGKKDDKDKKKKYEPPVPTRVGKKKKKTKGPDAASRLPLVTPHTQCRL
KLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNH
AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAP
QETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVA
NQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSG
GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT
KKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK
KSKENVLYKKQEGTPEGLYL
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaaagtcagagtggtggtcacggtcctggaggcggcaagaaggatgacaaggac
aagaaaaagaaatacgaacctcctgtaccaactcgagttgggaaaaagaagaagaagaca
aaaggaccagatgctgccagcagactgcccctggtgacgcctcacactcagtgccggtta
aagctgctgaagctggagagaattaaagactatcttctcatggaggaggagttcattaga
aaccaggagcagatgaagcccttagaagaaaagcaagaggaggagaggtcaaaggtggat
gacctgcgggggacgccgatgtcggtggggaccctggaggagatcatcgatgacaaccac
gccatcgtgtccacatctgtgggctcggagcactacgtcagcatcctctcgttcgtagac
aaggacctgctggagcccggctgctctgtgctgctcaaccacaaggtgcacgcggtgatc
ggggtgctgatggacgacacggaccccttggtcacggtgatgaaggtggaaaaggcgccc
caagagacctacgccgacatcggggggctggacaaccaaatccaggaaatcaaggaatcc
gtggagcttcctctcactcatcctgaatactacgaagagatggggatcaagccccctaag
ggggtcattctctatggtccgcccggcacagggaaaaccttattagccaaagcagtggcg
aaccagacctcggccaccttcctgcgagtggtcggctctgaactcattcagaagtacctg
ggcgacggccccaagctcgttcgggaactgtttcgagtcgctgaagaacacgcaccatcc
atcgtctttattgatgaaattgatgctattgggacgaaaaggtacgactccaactcaggc
ggggagagggagattcagcgaacgatgctggagctgctgaaccagctggacggctttgac
tcaaggggagacgtgaaagtcatcatggccacaaaccggatagagacgctggaccccgcc
ctcatcagaccaggccgcatcgacaggaagattgagttccccctgcccgacgaaaagacc
aagaagcgcatcttccagatccacacgagcaggatgacgctggccgacgacgtgaccctg
gacgacttgatcatggctaaagacgacctctctggtgccgacatcaaggcaatctgtaca
gaagctggtctgatggccttgagagagcgcagaatgaaagtaacaaatgaagacttcaaa
aagtcgaaggaaaatgttctttataaaaaacaggagggcaccccagaggggctctatctc
tag
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