Bubalus bubalis (water buffalo): 102396994
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Entry
102396994 CDS
T05912
Symbol
NTN1
Name
(RefSeq) netrin-1 isoform X2
KO
K06843
netrin 1
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
102396994 (NTN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
bbub00536
]
102396994 (NTN1)
Glycosaminoglycan binding proteins [BR:
bbub00536
]
Heparan sulfate / Heparin
Axon guidance molecules
102396994 (NTN1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
EGF_LMN_ATRN
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
102396994
NCBI-ProteinID:
XP_044795222
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All DBs
Position
3:complement(34437091..34639906)
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AA seq
575 aa
AA seq
DB search
MRAVWEALAALAAVACLVGAVRGGPGLSMFAGQAAQPDPCSDENGHPRRCIPDFVNAAFG
KDVRVSSTCGRPPARYCVVSERGEERLRSCHLCNASDPKKAHPPAFLTDLNNPHNLTCWQ
SENYLQFPHNVTLTLSLGKKFEVTYVSLQFCSPRPESMAIYKSMDYGRTWVPFQFYSTQC
RKMYNRPHRAPITKQNEQEAVCTDSHTDMRPLSGGLIAFSTLDGRPSAHDFDNSPVLQDW
VTATDIRVAFSRLHTFGDENEDDSELARDSYFYAVSDLQVGGRCKCNGHAARCVRDRDDS
LVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSG
RKSGGVCLNCRHNTAGRHCHYCKEGYYRDLGKPITHRKACKACDCHPVGAAGKTCNQTTG
QCPCKDGVTGITCNRCAKGYQQSRSPIAPCIKIPVAPPTTAASSVEEPEDCDSYCKASKG
KLKINMKKYCKKDYGLGLFWNADTTLAPSLNGVSLESQGELGHGVHGLFPWASQVASLQS
QQQVTGSPKARTVDGRGTGLGSQGDLTSSTPTFQL
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcagtgtgggaggcgctggcggcgctggcggccgtggcatgcctggtgggcgcg
gtgcgcggcgggcccgggctcagcatgttcgccggccaggcggcgcagcccgacccctgc
tcggacgagaacggccacccgcgccgctgcatcccggactttgtcaacgcggccttcggc
aaggacgtgcgcgtgtccagcacctgcggccggcccccggcgcgctactgcgtggtgagc
gagcgcggcgaggagcggctgcgctcctgccacctctgcaacgcgtcggaccccaagaag
gcgcacccgcccgccttcctcacggatctcaacaacccgcacaacctgacgtgctggcag
tcggagaactacctgcagttcccgcacaacgtcacgctcacgctgtcgctcggcaagaag
ttcgaggtgacctacgtgagcctgcagttctgctcgccccggcccgagtccatggccatc
tataagtccatggactacggacgcacgtgggtgccctttcagttctactccacgcagtgc
cgcaagatgtacaaccggccgcaccgcgcgcccatcaccaaacagaacgagcaggaggcc
gtgtgcaccgactcgcacaccgacatgcgcccactctcgggcggcctcatcgccttcagc
acgctggacgggcgaccctcggcgcacgacttcgacaactcgccggtgctgcaggactgg
gttacggccaccgacatccgcgtggctttcagccgcctgcacacgttcggcgacgagaac
gaggacgactcggagctggcgcgcgactcgtacttctacgccgtgtccgacctgcaggtg
ggcggccgctgcaagtgcaacggccacgcggcccgctgcgtgcgcgaccgcgacgacagc
ctggtgtgcgactgcaggcacaacacggccggcccggagtgtgaccgctgcaagcccttc
cactacgaccggccctggcagcgcgccaccgcccgcgaggccaacgagtgcgtggcctgt
aactgcaatctgcatgcccggcggtgccgtttcaacatggagctttacaagctgtcgggg
cgcaagagtgggggcgtctgccttaattgtcgccacaacacggccggccgtcactgccac
tactgcaaggagggctactaccgcgacctgggcaagcccatcacccaccgcaaggcctgc
aaagcctgcgattgccaccctgtgggcgccgctggcaagacctgcaaccagaccacgggc
cagtgtccctgcaaggacggcgtgaccggcatcacctgcaaccgctgcgccaagggctac
cagcagagccgctcgcccatcgccccctgcataaagatccctgtggcaccgccaaccact
gcagccagcagcgtggaggagcccgaagactgtgattcctactgcaaggcctccaaaggg
aagctgaagattaacatgaaaaaatactgcaagaaggactatggactcgggcttttctgg
aatgcggacacaactctggcaccttccttgaatggagtctctctggaaagccagggagag
ctgggccatggcgtgcatggattattcccgtgggccagccaggtggcctcgctacagtct
cagcaacaggtcacaggctctccaaaagcaaggaccgtggatggaaggggcactggtttg
gggagccagggagacctgacttccagcacgcccactttccagctatga
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