Bubalus bubalis (water buffalo): 102397245
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Entry
102397245 CDS
T05912
Symbol
COL6A2
Name
(RefSeq) collagen alpha-2(VI) chain isoform X1
KO
K06238
collagen type VI alpha
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04151
PI3K-Akt signaling pathway
bbub04510
Focal adhesion
bbub04512
ECM-receptor interaction
bbub04820
Cytoskeleton in muscle cells
bbub04974
Protein digestion and absorption
bbub05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
102397245 (COL6A2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102397245 (COL6A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102397245 (COL6A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102397245 (COL6A2)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
102397245 (COL6A2)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
102397245 (COL6A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bbub04147
]
102397245 (COL6A2)
00536 Glycosaminoglycan binding proteins [BR:
bbub00536
]
102397245 (COL6A2)
Exosome [BR:
bbub04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102397245 (COL6A2)
Glycosaminoglycan binding proteins [BR:
bbub00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102397245 (COL6A2)
Hyaluronan
Extracellular matrix or blood plasma proteins
102397245 (COL6A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Motif
Other DBs
NCBI-GeneID:
102397245
NCBI-ProteinID:
XP_025148817
LinkDB
All DBs
Position
1:190659606..190690828
Genome browser
AA seq
1027 aa
AA seq
DB search
MLRRKGAAKMLRSPCSALLLWGLLGAVHAQQQEVISPGTSDRNSCPEKADCPIHVYFVLD
TSESITMQSPTDSLLYHMQQFVLQFISQLQDELYLDQVALSWRYGGLHFSDLVEVFSPPG
SDRASFTKSLQSISSFRRGTFTDCMLANMTQEVRRHVGKGVVNFAVVITDGHVTGSPCGG
IKLQAERAREEGIRLFAVPPNLKLNEQGLRDIANTPHELYRNNYATMRPDSTEIDQDTIN
RIIKVMKHEAYGECYKVSCLEIPGPPGPKGYRGQKGAKGNMGEPGEPGQKGRQGDPGIEG
PIGFPGPKGVPGFKGEKGEFGADGRKGAPGLAGKNGTDGQKGKLGRIGPPGCKGDTGDRG
PDGYVGEAGSPGERGDQGSKGDPGRPGRRGPPGENGAKGSKGYQGNNGAPGSPGLKGAKG
GPGPRGPKGEPGRRGDPGTKGGPGSDGPKGEKGDPGPEGPRGLAGEVGNKGAKGDRGLPG
PRGPQGTVGEPGKQGSRGDPGDAGPRGDSGQPGPKGDPGRPGFSYPGPRGAPGDKGEPGP
PGPEGSRGDFGSKGEPGRKGQKGEPADPGPPGEPGPRGQRGAPGPEGEPGPPGDPGLTEC
DVMTYVRETCGCCDCEKRCGALDVVFVIDSSESIGYTNFTLEKNFVINVVNRLGAIAKDP
KSETGTRVGVVQYSHEGTFEAIQLDDERIDSLSSFKEAVKNLEWIAGGTWTPSALKFAYN
KLIKESRRQKTRVFAVVITDGRHDPRDDDLNLRALCNHEVTVTAIGIGDMFHEKHESENL
YSIACDKPQQVRNMTLFSDLVAEKFIDDMEDVLCPDPQIVCPDLPCQTELYVAQCTQRPV
DIVFLLDGSERLGEQNFHKVRRFVEEVSRRLTLARRDDDPLNARVALLQFGGPREQQVAF
PLTSNLTVIQEALASARYLNSFSHVGTGIVQAINQVVQGARAGARRHAELSFVFLTDGVT
GNDSLDEAVHSMRKQNVVPTVVAVGSDVDTDVLSKISLGDPAAVFREKDYDSLAQPGFFD
RFIRWIC
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgttgaggcgcaagggtgctgccaagatgctccgcagcccctgctccgccctcctgctc
tgggggctcctgggggccgtccatgctcagcagcaggaggtcatcagccctggcacctcg
gacaggaatagctgccctgagaaggccgactgcccaatccacgtgtacttcgtgctggac
acgtcggagagcatcaccatgcagtcccccactgacagcctgctctaccacatgcagcag
tttgtgctgcagttcatcagccaactgcaggatgagctctacctggaccaggtggccctc
agctggcgctacggcggcctgcacttctccgatctggtagaggtgttcagcccgccgggc
agcgaccgggcctccttcaccaagagcttgcagagcatcagctccttccgccggggcacc
ttcaccgactgcatgctggccaacatgacccaggaggtccggcggcatgtgggcaagggt
gtggtcaacttcgcggtggtcatcaccgacggtcacgtgaccggcagcccgtgtgggggc
atcaagctgcaggcagagcgagcccgcgaggagggcatccggctgttcgcggtgccgccc
aacctgaagctgaatgaacagggcctgcgggacattgccaacacaccccacgagctctac
cggaacaactatgcgaccatgcggccggactccactgagatcgaccaggacaccatcaac
cgcatcatcaaggtcatgaaacatgaagcctatggagagtgctacaaggtcagctgtctg
gagatccctgggccccctggccccaagggctaccgcggacagaagggcgccaagggcaac
atgggtgagcctggagagcctggacagaaggggcgacagggagatccaggcatcgaaggc
cccattggattccctggacccaagggtgttcctggtttcaaaggcgagaagggcgagttt
ggagccgacgggcggaagggtgccccgggcctggcgggcaagaacgggacagatgggcag
aagggcaagctggggcgcattggacctcctggctgcaagggagacaccggggatcggggc
cctgatggctacgtgggggaagccggcagccctggggagagaggagaccaaggctcaaag
ggggaccctggccgcccaggacgcagaggcccccccggggagaatggggcaaaaggaagc
aagggctatcaaggcaacaacggagccccaggaagtcctggcctgaaaggagccaagggc
gggcctgggccccgaggacccaaaggcgagcctgggcgcaggggagaccctggaaccaaa
ggcggcccaggcagtgacggccccaagggtgagaagggggaccctggtcctgaggggccc
cggggcctggctggagaggttggcaacaaaggagccaagggagatcgtggtttgcctgga
cccagaggtccccaggggactgtcggagagcctgggaaacagggatctcggggagaccct
ggtgatgctggtccccgcggagactcgggacagcctggccccaagggagaccctggcagg
cctggattcagctatcccggaccccgaggagcacctggagacaagggtgagccaggcccc
cccggccccgaggggagcagaggtgactttggctccaaaggagaacctgggaggaaaggc
cagaagggagagcctgcagatcctggtccccctggtgagcctggcccacgagggcagaga
ggagccccaggacctgagggagagcctggccccccaggagaccccggcctcacggaatgc
gacgtcatgacctacgtgagggagacctgcgggtgctgtgactgtgagaagcgctgtggc
gccttggatgtggtgttcgtcatcgacagctctgagagcattggctacaccaacttcacc
ctggagaagaacttcgtcatcaacgtggtcaacaggctgggggccatcgccaaggacccc
aagtcggagacggggacccgcgttggcgtcgtgcagtacagccacgagggcaccttcgaa
gccatccagctggacgacgagcgcatcgactcgctgtccagcttcaaagaggccgtcaag
aaccttgagtggattgctggcggcacctggacaccctcggccctcaagttcgcctacaac
aagctcatcaaggagagccggcgccagaagacccgcgtgttcgcggtggtcatcacagac
ggccgccacgacccccgggacgacgacctcaacctgcgggcactgtgcaaccacgaagtg
acggtgacggccatcggcatcggggacatgttccacgagaagcacgagagcgagaacctg
tactccattgcctgcgacaagccgcagcaggtgcgcaacatgacgctcttctccgacctg
gtggcagagaagttcatcgacgacatggaggacgtgctgtgcccggatccccagatcgtg
tgcccggatcttccctgccaaacagagctgtacgtggcccagtgcacacagcgaccagtg
gacatcgtcttcttgctggacggctctgagcggctgggcgagcagaacttccacaaggtg
cggcgcttcgtggaggaggtgtcccgacggctgaccctggcgcgcagggacgacgacccg
ctcaacgcacgtgtggcattgctgcagttcgggggcccacgtgagcagcaagtggccttc
ccactgacctccaacctgaccgtcattcaggaggcgctggcgagcgcgcgctacctcaac
tccttctctcacgtgggcacgggcatcgtgcaggccatcaatcaggtggtgcaaggcgct
cgggctggggcacgccgccacgcggagctgtccttcgtgttcctcaccgacggcgtcaca
ggcaacgacagcctggatgaggcagtacactccatgcgcaagcagaacgtggtgcccacc
gtggtggccgtgggtagcgatgtggacacggatgtgctctccaagatcagcctgggcgac
ccggccgccgtcttccgcgagaaagactacgacagcctggcccagcccggcttcttcgac
aggttcatccgctggatctgctag
DBGET
integrated database retrieval system
