Bubalus bubalis (water buffalo): 102397294
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Entry
102397294 CDS
T05912
Symbol
CDH17
Name
(RefSeq) cadherin-17
KO
K06811
cadherin 17, LI cadherin
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09160 Human Diseases
09162 Cancer: specific types
05226 Gastric cancer
102397294 (CDH17)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bbub04515
]
102397294 (CDH17)
Cell adhesion molecules [BR:
bbub04515
]
Cadherins
Major cadherins
102397294 (CDH17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
102397294
NCBI-ProteinID:
XP_006076347
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All DBs
Position
15:complement(12089980..12176195)
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AA seq
832 aa
AA seq
DB search
MTTQAQLHCLCLLTLYLTTGYGQEGKFSGPLKPMEFSIFEGQEPSQPIFQFKANPPAVTF
KLTGETDGIFQIQPDGLLYHNKSLDRETRAVHRLQVSALDAQGNTVEGPVPVTIEVKDIN
DNRPVFLQQRYEGSVRQNSRSGKPFIYVNATDLDDPATLNGQLIYQIIMQLPKVNNVMYF
QINNKTGGISLTPQGSQELDPLKNPSYKLLVSVEDMGGLTEHSFTDSVHVDITVKENIWK
PPEPVEIEENSTEPYPIKITQVQWNDPGALYSLVDKENTPRFPFSIDQKGDIYVTQPLDR
EEKDAYVFYAVARDEQGKSLSIPLKIQVKVKDINDNPPTCPSPVTVLEVQENEQIGSSIG
TLTAHDMDEQDTINSVLEYRIVDQTPKVPQDGLFLVQEYSGILQLVLQSLRKWDTPQYNL
TVEVSDKDFKTLCFVQINVIDINDQIPIFEKLNYGNLTFPEDTAVGSVILTIQATDADEP
HTGSSKILYRITQGDSEGRLEIETDPQTNTGYVKLKKPLDFETVAIHNIVVQAENPEPLV
PGVQYNASSSATFRLMVTDVNEAPQFFQQVSEAKVSEAVVKGTKVGNMTAKDPEGLDVSY
SLRGDKRGWLRIDPATGEIFSVALLDREAESLYRVQVVATEVGGSYLSSTAQFHLTLTDV
NDNPPRLVKEYTGLFFCYPPKAPGSLIFEATDDDELTFRGRHFTFSLGSESLQKDWEVSK
INGTHARLSTKHTGFEERVYNIPIRIGDGGRPPLEGTVSLPVTFCKCVENRCFQPAARMP
GIPPVGMTVGILLATFLVIGIILAVAFFRMKRDKGQHNAESAQASETKPLRN
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgcaagcccagctacactgcttgtgtctccttacactttacttgacaactgga
tatggccaagagggaaagtttagtggacccctaaaacccatggaattttcaatttttgaa
ggccaagaaccgagtcaacccatattccagtttaaggccaatcctcctgctgtgactttc
aaactaacgggggagacagatggcatatttcagatacaacctgatggactgctatatcac
aacaaaagcctggacagggaaacaagagctgttcacagactgcaggtctcagccctggat
gctcagggcaatacagtggagggcccggtccctgtcaccatcgaagtgaaggacatcaat
gacaaccgacctgtgtttctccagcaacgttatgaaggctcagtaaggcagaactctcgc
tcaggaaagccctttatctatgtcaatgctacagacttggatgatccagccacactcaat
ggccaacttatttatcagattatcatgcagcttcccaaggtcaacaatgtcatgtacttt
cagatcaacaacaaaacaggaggaatttcacttactccacaaggatcccaggaattggat
cctttgaagaatccttcctataagctgctggtctcagtggaagacatgggaggcctgact
gagcattcctttactgacagtgtacatgtggatattacggtgaaggagaatatttggaaa
ccgccagaacctgtggagattgaagaaaactcgactgaaccttatcccattaaaatcact
caggtgcagtggaatgatccaggtgctctatactccttagtggacaaggagaacacacca
cgatttccattttcgatagaccagaaaggagatatttatgtgactcagcccttggaccga
gaagaaaaggatgcatatgttttttatgcggttgcaagggatgagcaaggaaaatcactc
tcaatcccactgaaaattcaagtgaaagtgaaagacattaatgataatccgcctacgtgt
ccatctccagtgactgtacttgaggtccaggagaatgaacaaataggaagcagtattgga
actcttactgctcatgacatggatgaacaagacactatcaacagtgttttagaatacaga
attgtggatcaaactcccaaagtgcctcaagatggactcttcctggtccaagaatactct
ggaatactccagttagtgctgcagtcgttgcgtaagtgggacactccacagtacaacctg
accgtagaggtgtctgacaaagacttcaagaccctctgctttgtgcaaatcaacgttatt
gatatcaatgatcagatccccatctttgaaaagttaaattatggaaacctaactttccct
gaagacacagctgtgggatctgtcatcttaaccatccaggccacagacgctgatgaacca
catactgggagttctaaaatcctgtatcgaattacacagggagacagtgagggacgtttg
gagattgaaacagatccccaaaccaatactggatacgtcaagcttaaaaagcctcttgat
tttgaaacagtagccattcataatattgtagtccaagcagaaaatcctgagcctctggtg
cctggtgtacagtataatgccagctcttctgctaccttcagactgatggtgacagacgtg
aatgaggccccgcaatttttccaacaagtatctgaagcaaaagtcagtgaggctgtggtt
aaaggcacaaaagtgggcaacatgactgccaaggatccggaaggtctggacgtcagttat
tcactgagaggcgacaagagaggctggctaagaattgaccccgccactggtgagatcttc
agtgtggcgctgctggacagggaagctgaaagtctgtatcgggtacaagtggtggcaacg
gaagtaggtggatcctacttgagctccacggcgcaattccacctgacccttacggatgtg
aacgacaatcccccacggctggtcaaggagtacacaggcttgttcttttgctatcccccc
aaagcacccggaagtctcatttttgaggccaccgatgatgatgaactaacatttcggggt
cgacactttacattttcccttggcagcgaaagcttacaaaaagactgggaagtttccaaa
atcaatggaactcatgcccgcctctccaccaagcacacgggctttgaggagagagtttac
aacatcccaatccgcatcggtgatggtggccggccacccttggaagggactgtctctttg
ccagttactttctgcaagtgtgtggaaaataggtgtttccagccagcggctcgcatgcct
gggatacccccagtgggcatgacagttggtatactccttgccacctttttggtcatcggc
ataattttagcagtggcgtttttccggatgaagagggataaaggccaacataatgctgaa
agtgctcaggcatctgaaaccaagcctctgagaaactga
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