Bubalus bubalis (water buffalo): 102397428
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Entry
102397428 CDS
T05912
Symbol
RPAP2
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 isoform X6
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bbub01009
]
102397428 (RPAP2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbub03021
]
102397428 (RPAP2)
Enzymes [BR:
bbub01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
102397428 (RPAP2)
Protein phosphatases and associated proteins [BR:
bbub01009
]
HAD phosphatases
Fcp/Scp phosphatases
102397428 (RPAP2)
Transcription machinery [BR:
bbub03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
102397428 (RPAP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
102397428
NCBI-ProteinID:
XP_044800628
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All DBs
Position
6:complement(51097567..51224551)
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AA seq
561 aa
AA seq
DB search
MADWVGPCSAGRKARRPRASRVVAGTKQTSALNQEDASQRKAEVEAAMRKKIEFERKALH
IVEQLLEENISEEFLRECGKFITPAHYSDVVDERSIIKLCGYPLCQNKLGIVPKQKYKIS
TKTNKVYDITERKCFCSNFCYKASKFFEAQIPKSPVWVREEERHPDFQLLQDGQSGPSGE
EIQLCSKAIKTSDIDSPGHFEKHYESGSSSTHSDSSSDNEQDFVSSILPGNRPNATRPQL
HKKSIMKKKAGQKVNSQPESKEQTVVDVIEQLGNCRLDNQEKATACELPLQNVNTQISSN
SSLQKKLEASEISDIKYSSSKVTLVGISKKSAEHFKRKFAKSNQVSGSASSSLQVCPEIA
KANLLKALKETLIEWKTEETLRFLYGQKYASVCLKSSSTPLVKEELDEDDTTSDPGSHSP
ALQELNSLDESLPFRASDTAIKPLPSYENLKKETETLNLRIREFYRGRYVLNEETTKSQD
SEEHDPTFPLIDSSSQNQIRKRIVLEKLNKVLPGLLGPLQITLGDIYTQLKNLVQTFRLT
NRNIIHKPAEWTLIALVLLSI
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggccgactgggtcgggccgtgctctgcgggccgcaaagcccggcgtccccgcgcctcc
cgagttgtcgcaggtactaagcaaacaagtgccttgaaccaagaagatgcttctcaaagg
aaagcagaagtagaagcagctatgagaaagaagattgagtttgagagaaaagctttacat
attgtggaacagcttttagaagagaatatttcagaagaattcctaagggagtgtgggaaa
ttcatcacacctgctcactatagtgatgttgtggatgagcgttctattatcaaactctgt
ggctatcctttatgtcagaacaagctaggaattgtaccaaaacagaaatataaaatttcc
accaaaactaataaagtctatgatattactgaaagaaagtgtttttgcagcaatttttgt
tataaagcatctaagttttttgaagcacaaattcctaaaagtccagtgtgggttcgcgag
gaagaaagacatcctgattttcagctgctacaggacggacaaagtggtccttctggagaa
gaaatacagttatgcagcaaagccattaaaacatcagatattgacagtcctggccatttt
gagaagcattatgaatctggttcttctagcactcatagtgatagtagcagtgataatgag
caagactttgtttcctccattctaccaggaaacagaccaaatgcaacaaggccacagctg
cacaagaaaagcataatgaaaaagaaagctggtcaaaaagttaactctcaacctgaaagc
aaagagcaaacagtagtagatgtcattgagcagttaggcaattgcagattagataatcag
gagaaagctactgcttgtgaacttcctttacagaatgtaaatacacagatttcttcaaat
agttctctgcaaaaaaaattagaagcttcagaaatttctgatattaaatacagtagttca
aaagtaactcttgtaggcataagtaagaaaagtgctgagcattttaagaggaaatttgcc
aaatcaaaccaagtttctgggtcagcttccagttcattgcaggtgtgccctgaaattgca
aaggcaaacttacttaaagccctgaaagagactttgattgagtggaagacagaagaaact
ttgaggtttttgtatggccagaagtatgcatctgtatgtctaaaatcctcctcaacccct
ctggttaaagaagaacttgatgaagatgatacgacctctgacccaggtagtcattctcct
gccttgcaggagttgaacagcttggatgagtctttaccatttagagcctcagatacagcc
attaaaccactgccaagttatgagaacttgaaaaaagaaactgaaacattaaatttaagg
atcagggagttttatagaggacgatatgttttgaatgaagaaaccaccaaatcacaagac
tcagaagagcatgatcccacctttccactgatagattcaagttctcagaaccagatcaga
aaacgcatcgtacttgaaaaattgaataaagtattgcctggacttttgggacctcttcag
attacattaggagatatttacacacaacttaaaaatcttgtccaaactttcagattaaca
aatagaaatattatacataaacctgcagagtggaccttaattgctttggtgttgctgtca
atatga
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