Bubalus bubalis (water buffalo): 102397446
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Entry
102397446 CDS
T05912
Symbol
ARHGEF12
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X2
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04270
Vascular smooth muscle contraction
bbub04360
Axon guidance
bbub04611
Platelet activation
bbub04625
C-type lectin receptor signaling pathway
bbub04810
Regulation of actin cytoskeleton
bbub05135
Yersinia infection
bbub05152
Tuberculosis
bbub05163
Human cytomegalovirus infection
bbub05200
Pathways in cancer
bbub05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
102397446 (ARHGEF12)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
102397446 (ARHGEF12)
04625 C-type lectin receptor signaling pathway
102397446 (ARHGEF12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
102397446 (ARHGEF12)
09158 Development and regeneration
04360 Axon guidance
102397446 (ARHGEF12)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
102397446 (ARHGEF12)
05205 Proteoglycans in cancer
102397446 (ARHGEF12)
09172 Infectious disease: viral
05163 Human cytomegalovirus infection
102397446 (ARHGEF12)
09171 Infectious disease: bacterial
05135 Yersinia infection
102397446 (ARHGEF12)
05152 Tuberculosis
102397446 (ARHGEF12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bbub04131
]
102397446 (ARHGEF12)
Membrane trafficking [BR:
bbub04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
102397446 (ARHGEF12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
102397446
NCBI-ProteinID:
XP_025122536
LinkDB
All DBs
Position
16:complement(54331697..54500155)
Genome browser
AA seq
1525 aa
AA seq
DB search
MSGTQSTITDRFPLKKPIRHGSILNRESPTDKKQKVERSTSHDFDPTGLVQRCVIIQKDD
NGFGLTVSGDNPVFVQSVKEDGAAMRAGVQTGDRIIKVNGTLVTHSNHLEVVKLIKSGSY
VALTVQGRPPGSPQIPLADSEVEPSVTGHMSPIMTSPHSPGAPGNMERITSPVLMGEENN
VVHNQKVEILRKMLQKEQERLQLLQEDYNRTPAQRLLKEIQEAKKHIPQLQEQLSKATGS
AQDGAVVTSSKPLADGLAVGEGEADPGDGLGRLDYGSGDASRPGSDSADSPKSGLKERIY
LEENPEKSEAIQDTDTQSLVGSPSTRVAPHIIGAEDDDFGSEHEQINGQCSCFQSIELLK
SRPAHLAVFLHHVVSQFDPATLLCYLYSDLYKQTNSKETRRVFLEFHQFFLDRSAHLKVS
VPDEISVDLEKRRPELIPEDLHRHYIQTMQERVHPEVQRHLEDFRQKRSMGLTLAESELT
KLDVERDKDRLTLEKERACAEQIVAKIEEVLMTAQAVEEEKSSTMQYVILMYMKHLGVKV
KEPRNLEHKRGRIGFLPKIKQSMKKDREGEEKGKRRGFTSILGPPRRPSRHDNSAIGRAM
ELQKQRHPKHLSTPSSVSPEPQDSAKLRQSGSASEGADSGYLPANSTSSMVSGATLSQEG
GKENDMGSKQAGETPASGDSLDGTPRTPNTIFDFPPPPLDQVQEEEWEVERVTEHGTPKP
FRKFDSIAFGESQSEDEQFENDLETDPPNWQQLVSREVLLGLKPCEIKRQEVINELFYTE
RAHVRTLKVLDQVFYQRVSREGILSPSELRKIFSNLEDILQLHIGLNEQMKAIRKRNETS
VIDQIGEDLLIWFSGPGEEKLKHAAATFCSNQPFALEMIKSRQKKDSRFQTFVQDAESNP
LCRRLQLKDIIPTQMQRLTKYPLLLDNIAKYTEWPTEREKVKKAADHCRQILNYVNQAVK
EAENKQRLEDYQRRLDTSNLKLSEYPNVEELRNLDLTKRKMIHEGPLVWKVNRDKTIDLY
TLLLEDILVLLQKQDDRLVLRCHSKILASTADSKHTFSPVIKLNTVLVRQVATDNKALFV
ISMSDNGAQIYELVAQTVSEKTVWQDLICRMAASVKEQSTKPIPLPQPPPCEGDNDEEEP
PKLKVEHHDISVTGLQSPDRDLGLESPLMSSKPQSHSLGTSGKSEVDDLFVAERQFAKEQ
HADGTLKEVGVNYQITIPDPHLPVSEERWALDALRNLGLLKQLLVHQLGLTEKSAQEDWP
HFPRCRTASLGVQADSGTQNPENIKACHPVEAQMPFRTGTGDISTCYSPRTSTESSAPRD
SVVLAFQESQASDILVMDHMIMTPEMPPSEPEGGLDESGEHFFDAREAHSDDNPSEGDGA
VKKEEKDVNLRISGTYLILDGYDPVQESSTDDEVASSFPLQPGAGIPSLDSGHQQQPSPQ
NAHSDGAVSPFNPELLVQQRWGAMEDSCFEIQSPSACADSQSQIMEYIRKIEADLEHLKK
VEESYTILCQRLAGSALTDKHSDKS
NT seq
4578 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcacacagtctactatcaccgacaggtttcccctcaaaaaacctataaggcat
ggaagtattttgaaccgtgagtcaccaacagataagaagcagaaagttgagcgcagtaca
tcacatgattttgaccccacaggtcttgttcagcgttgtgtgatcatccagaaggatgac
aatggatttgggctgacggtcagtggagacaatccagtgttcgtacagtctgtcaaagaa
gatggagcagccatgcgggctggagtacagacaggtgatcgaatcatcaaggtgaatgga
actctggtgactcattcaaaccatttggaagtggtgaagctaatcaaatctggttcctat
gtagctctcactgttcagggacgcccccctgggtcgccccagattccacttgctgattct
gaagtagagccatcggtcactggacatatgtctcccatcatgacatcccctcattcacct
ggtgcacctgggaatatggagagaattactagtcctgtgctcatgggggaagaaaacaat
gtggttcataaccagaaagtagaaattctgagaaaaatgttacagaaagaacaggaacgg
cttcagctattgcaggaagactacaaccgaacacctgctcagagattgctaaaagagatc
caagaggccaagaaacacattcctcagctgcaagagcagttatccaaagccacaggctct
gctcaggatggagctgtagttacatcctccaagccgttagctgacgggctagcagtgggt
gaaggagaagcagatcctggtgatgggctaggcaggcttgactatggcagcggagacgct
tctcggcccggtagtgacagtgccgatagtcccaagagtggcttgaaagagaggatttat
ctagaggaaaacccagaaaaaagtgaagcaattcaggacactgacactcagtcgcttgtt
gggagtccctctacccgtgtggcacctcatattattggagcagaggacgatgactttggt
agtgaacatgaacagatcaatgggcagtgcagctgttttcagagcattgagctgctaaaa
tctcgccctgctcacttggctgtcttcttacaccatgtagtttcccagtttgaccctgca
acattgctctgttacctctattcagacctatataaacagaccaattccaaggagacccgt
cgtgtcttccttgagttccatcagttcttcctggatcgatctgctcacctgaaggtttct
gttcctgatgaaatatcagtagatctagaaaaaagacgaccagagcttattcctgaggat
ctacatcgccactatatccaaactatgcaagaaagagtccacccagaagttcagaggcac
ttggaagattttcggcagaagcgcagcatggggctgaccctggctgaaagtgaactgact
aaacttgatgtagagcgagacaaggaccggttaactttggagaaggaacgggcatgtgca
gaacagattgttgccaaaattgaagaagtgttgatgactgctcaggctgtagaagaagaa
aagagttcaacaatgcaatatgttattctcatgtacatgaaacatttgggagtaaaagtg
aaagaacctcgaaatttggagcacaagcgaggtcggattggattccttccaaaaatcaag
caaagtatgaagaaagatagagaaggcgaagaaaaggggaagcgaagagggttcaccagc
atcttgggaccccctaggagaccaagccgccacgacaatagcgcaattggcagagccatg
gaactgcagaagcagcgccaccctaagcacttgtccacaccctcgtctgtgagtcctgaa
cctcaggattctgcgaagctgcgccagagtggatcagcaagtgaaggagcagacagtgga
tacctgccagccaattccacgtcctccatggtttcaggggccactctttcccaggaagga
gggaaagagaatgatatgggatcaaaacaagctggagaaacgccagcatctggagactcc
ttggatggcactcctcgtactcccaacaccatctttgatttcccacctcctccattagac
caggtgcaggaggaggaatgggaagtagagagagtgactgagcatgggacaccaaagccc
tttcgaaagtttgacagcatagcttttggagaaagtcagagtgaggatgaacagtttgaa
aatgacttagagacggacccacccaactggcaacagctcgtcagtcgagaagtgttattg
ggactcaagccttgtgagatcaaaagacaggaagtaattaatgaattgttctacactgaa
agagctcatgttcgaacattgaaggttctagatcaagtgttttatcagcgagtgtccaga
gaaggaattttgtcaccttcagagctacggaaaattttttcaaacttagaagatattctt
caacttcacattggattgaatgagcaaatgaaggctattcggaagaggaatgagacctct
gttattgatcagattggggaagatttgctgatctggttcagtggacccggggaggaaaag
ttgaaacatgctgctgctaccttttgcagtaaccaaccctttgccctggaaatgatcaag
tctcgccagaaaaaggattctcgattccagacttttgtgcaagatgctgagagtaatcca
ctgtgtcgtcgtctgcagctaaaggatatcattcccactcaaatgcagaggcttactaag
taccctcttctcttggacaatattgccaaatacacagagtggccaacagaaagggagaag
gtgaagaaagctgcagatcactgtcgtcagatcttaaattacgtgaaccaagctgttaag
gaggcagagaacaaacagcgcttggaagattatcagcgtcgccttgatacctctaatctg
aagttgtcagaatacccaaatgttgaagagctcaggaatttggatttaacaaaaaggaag
atgattcacgaaggcccattggtttggaaggtgaatagagataaaacaattgatctgtat
acgttgctgctggaagatattcttgtattattacaaaagcaggatgatagactggtgtta
aggtgtcacagtaagattctggcatctacagctgacagcaaacacacatttagccctgtc
atcaagctgaatacggtgttggttcgacaagtggcaacagataacaaagctttattcgtc
atctccatgtctgataatggagcccaaatttatgaactggtggcacagacagtttctgaa
aagactgtctggcaggacctaatatgtcggatggccgcgtccgtgaaggagcagtccaca
aagccgatcccactgccccagccgccaccgtgcgaaggagacaacgatgaagaagaacct
ccaaaattaaaagtggaacatcatgacatttcagtcactggtctgcagagtccagacaga
gatttgggattagagtctcctttaatgtcatcaaaacctcagtctcattcgctgggtacc
tctgggaagtcggaagtagatgacctctttgtggctgagagacagtttgcaaaggagcag
catgcagatgggacactaaaggaagttggagtgaattatcaaatcacaatcccagatcca
cacttgcctgtctcggaagaacggtgggcgctggatgcactaaggaatttgggtttgttg
aagcagctgctggtacaccagctgggcttgactgagaagagcgctcaggaagactggcca
cattttccaagatgcaggacagcctctctgggggtgcaggcagacagtggaacccagaac
cctgaaaatattaaggcctgtcatcctgttgaagcacagatgccctttagaactggaact
ggtgacatttcaacttgttacagtccacggacttcaactgaatcttctgctccacgggat
tcagtagtactggcattccaagagagccaggcaagtgacattttagtaatggaccacatg
attatgaccccagagatgcctccctcagagccagaagggggtcttgatgagagtggagag
cacttttttgatgcccgtgaagcacatagtgatgataatccatcagaaggtgatggagca
gttaaaaaggaagagaaggatgttaatttgcgcatctcaggaacctatctgattcttgat
ggctatgacccggtgcaggagagctccacagatgacgaggttgcttcctcgttccccctt
cagcccggggcaggcatcccctctctggactctggacaccagcagcagccttctccccag
aatgctcattctgatggggctgtttcaccgttcaacccagaattactggtccagcagcgc
tggggagctatggaggattcctgttttgagatccagagtccctctgcttgtgctgattca
caaagccagatcatggagtacattcgtaaaatagaggctgaccttgaacacttaaagaag
gtggaggaaagttacaccattctttgccaaaggctggctggatcagccctcacagacaag
cactcagataaaagttag
DBGET
integrated database retrieval system
