Bubalus bubalis (water buffalo): 102397552
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Entry
102397552 CDS
T05912
Symbol
DDX27
Name
(RefSeq) probable ATP-dependent RNA helicase DDX27 isoform X1
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bbub03041
]
102397552 (DDX27)
03009 Ribosome biogenesis [BR:
bbub03009
]
102397552 (DDX27)
Enzymes [BR:
bbub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102397552 (DDX27)
Spliceosome [BR:
bbub03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
102397552 (DDX27)
Ribosome biogenesis [BR:
bbub03009
]
Eukaryotic type
Pre-60S particles
Helicases
102397552 (DDX27)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Zip
UTP25_NTPase-like
PRK
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
102397552
NCBI-ProteinID:
XP_006041067
LinkDB
All DBs
Position
14:complement(6144508..6161753)
Genome browser
AA seq
765 aa
AA seq
DB search
MLSELGFIRTIGEDEDVQVEPETDSEDEEEEGPIVLGRKQKALQKNRSADFNPDFVFTEK
EGMYDGSWAMADVLSQLKKKRAATTLDEKIEKVRKKRKTEDKEAKSGKSEKEKEAKEGSE
PEEEEDLERKDEEASEDEESETDYSSADENILTKADTLKIKEQKKKKKKGQEAGGFFEDA
SQYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAA
FALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVIKQLAQFCSITTCLAVGGLDVKS
QEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIRM
CSHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDRE
AIVAALLMRTFTDHVMLFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQRLEALRRFKD
EQIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARAGRAGRSVSLVGEEE
RKMLKEIVKAAKAPVKARILPQDVILKFRDKIEKMEKDVYAVLQLEAEEKEMQKSEAQIN
TAQRLLEKGKEAPNPEPERSWFQTKEERKKEKIAKALQEFDLALRGKKKRKKFMKEAKKK
GEMTAEERSQFEILKAQMFAERLAKRNRRAKRARAMPEEEPVRAPAKKQKQVKKSVFDEE
LTNTSKKALKQYRAGPSFEERKKLGLPHQRRGGNFKSKSRYKRRK
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgctctcagagctgggcttcatccggaccataggcgaagatgaggacgtgcaggtggaa
ccggagactgactctgaggacgaggaggaggaggggcccattgtgctgggcagaaagcag
aaagccttacaaaagaaccgcagcgctgatttcaaccctgactttgttttcactgagaag
gagggaatgtacgatggcagctgggccatggctgatgtcctaagccagctgaagaagaag
agggctgccacaacattagatgagaagattgagaaagttcgaaagaaaaggaaaacagag
gataaagaagccaagtctggaaagtcagagaaggagaaagaagcaaaggagggctctgaa
ccagaggaggaggaagaccttgaaagaaaagatgaagaagcctcagaagatgaagaatca
gagactgactactcatcagctgatgagaacatcctcaccaaggcagatacactcaaaata
aaggagcagaagaagaaaaagaagaaaggacaggaagcaggaggattttttgaagatgca
tctcagtacgatgaaaacctctcattccaggacatgaacctttcccgccctctgctgaag
gccatcacagccatgggcttcaagcagcccacccccatccagaaggcgtgcatacctgtg
gggctgttggggaaggacatctgtgcctgcgcagccacggggacaggtaaaacggcagct
tttgccctgccggtcttggagcgcctgatctacaaaccccgccaggctccagtgacccgc
gtgctggtgctggttcccacccgagaactgggcatccaggtgcactccgtcatcaagcag
ctggcccagttctgcagcatcaccacctgcctggctgtgggtggcctggacgtgaagtct
caggaagcagcgcttcgggcagcgcctgacatcctcatcgccaccccaggccggctcatc
gatcacctccacaactgcccttccttccacctgagcagcatcgaggtgctcatcttggat
gaggctgacaggatgctggacgagtactttgaggagcagatgaaggagatcatccgaatg
tgctcccaccaccgccagaccatgcttttctcagccacgatgacggacgaggtgaaagat
ctggcctctgtctccttgaagaatcccgtccggatatttgtgaatagcaacacggatgtg
gcccccttcctgcggcaggagttcatccggatccggcctaaccgggaaggggaccgggaa
gccatcgtggcagctctgttgatgagaaccttcactgaccatgtgatgctgttcacccag
accaagaagcaggcccaccgtatgcacatccttctggggctgatggggctgcaggtgggc
gagctccacggcaacctgtctcagacgcagcggctggaggccctccggcgctttaaagac
gaacagattgacatcctcgtggccaccgacgtagcagcccgtggactagacatcgagggg
gtcaaaacggtaatcaacttcaccatgcccaacaccattaagcattacgtccaccgggtg
gggcgcacagctcgtgccggccgggccgggcgctcagtctctctggtaggggaagaggag
cggaagatgctgaaggaaattgtcaaggccgccaaggcccccgtcaaggcccgtattctg
ccccaggatgtcatcctcaaattccgggataagattgagaaaatggagaaagatgtgtat
gcagttctgcagttagaggctgaggagaaagagatgcagaagtcggaagcccagatcaac
acagcacagcggctcctggagaaagggaaggaggcaccaaaccctgagcctgagaggagc
tggttccagaccaaggaagagaggaagaaggaaaaaattgccaaggctctgcaggagttt
gacttagccttaagaggaaagaagaaaaggaagaagtttatgaaggaagccaaaaaaaag
ggggagatgacagcagaggagagatcccagttcgaaatcctcaaggcacagatgtttgcg
gagcggctggccaagaggaaccgcagagccaagcgggcccgagcaatgcccgaggaggag
ccagtgagggctcctgcaaagaagcagaagcaggtgaagaaatcagtatttgatgaagaa
ctcaccaacacgagcaagaaggccctgaaacagtatcgagctggcccctcctttgaagaa
agaaaaaaattgggcttgccccaccagagacgaggaggaaactttaaatctaaatccagg
tacaaaaggaggaagtag
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