Bubalus bubalis (water buffalo): 102397564
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Entry
102397564 CDS
T05912
Symbol
SCRT1
Name
(RefSeq) transcriptional repressor scratch 1
KO
K09219
scratch
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bbub03000
]
102397564 (SCRT1)
Transcription factors [BR:
bbub03000
]
Eukaryotic type
Zinc finger
Cys2His2 Snail
102397564 (SCRT1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_6
C2CH-3rd_BIRD-IDD
zf-met
zf-C2H2_jaz
DUF7479
zf-BED
zf-C2H2_16
zf-C2H2_15
zf-C2H2_11
Gmx_para_CXXCG
Zf-C2H2_ZNF451
DpnI
Motif
Other DBs
NCBI-GeneID:
102397564
NCBI-ProteinID:
XP_025121410
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Position
15:complement(81375426..81381738)
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AA seq
352 aa
AA seq
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MPRSFLVKKVKLDTFSSADLESSYGRARSDLGVRLQEKGYLNDYAGPASVYDGDAEAALL
KGPSPEPMYAAAVRGELGPAAAGSAPPPTPRPELATAAGGYINGDAAVSEGYAADAFFIT
DGRSRRKAANASAAAAPSAASAPAPDSDGGGGVGAGTRGAGSGAGGRGGARAGAGTEARA
GPGAGSSGGRHACGECGKTYATSSNLSRHKQTHRSLDSQLARRCPTCGKVYVSMPAMAMH
LLTHDLRHKCGVCGKAFSRPWLLQGHMRSHTGEKPFGCAHCGKAFADRSNLRAHMQTHSA
FKHFQCKRCKKSFALKSYLNKHYESACFKGAAAGGPPAPAPTAPPQLSPVQA
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgcccagatccttcctggtcaagaaggtcaaacttgacacattctcctcggcagacctc
gagagctcctacgggcgcgcccggagcgacctcggcgtgcgactgcaggagaaaggatac
ctcaacgactacgcggggcccgcctccgtctacgatggcgatgccgaggcggccttgctc
aaagggccatccccggagcccatgtacgctgcggccgtgcggggagagctgggcccggcg
gccgcgggctcggcgccgccgcccaccccgcgcccggagctggccacagccgctggtggc
tacatcaacggcgacgcggcggtcagcgagggctacgcagctgacgccttcttcatcacc
gacgggcgctcccgtcgtaaggcagccaacgccagcgccgccgccgccccctccgcagcc
tcggcgccggcccccgacagcgacggcggaggcggggtcggggcgggcacgcgcggtgcg
gggtcgggggctgggggtcggggcggcgcgcgcgcgggtgcgggcaccgaggcccgcgcg
gggcctggggccggcagctcaggaggccggcacgcgtgcggcgagtgcggcaaaacgtat
gccacgtcgtctaacctgagccgccacaagcagacgcaccgcagcctggacagccagctg
gcgcggcgctgcccgacgtgcggcaaggtgtacgtgtccatgccggccatggccatgcac
ctgctcacgcacgacctgcgccacaagtgcggcgtgtgcggcaaggccttctcgcggccc
tggctgctgcagggccacatgcgttcccacaccggcgagaagcccttcggctgcgcgcac
tgcggcaaggccttcgccgaccgctccaacctgcgcgcgcacatgcagacgcactccgcc
ttcaagcacttccagtgcaagcgctgcaagaagagcttcgcgctcaagtcctatctcaac
aagcactacgagtcggcctgcttcaagggcgccgccgccggcggtcccccggcccctgcg
cccaccgcgccgccgcagcttagccctgtgcaggcctag
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