Bubalus bubalis (water buffalo): 102397621
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Entry
102397621 CDS
T05912
Symbol
DSCAM
Name
(RefSeq) Down syndrome cell adhesion molecule
KO
K06767
Down syndrome cell adhesion molecule
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bbub04515
]
102397621 (DSCAM)
Cell adhesion molecules [BR:
bbub04515
]
Immunoglobulin superfamily
Other
102397621 (DSCAM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
FN3_DSCAM-DSCAML_C
I-set
Ig_3
ig
Ig_2
V-set
Pur_ac_phosph_N
Ig_5
C2-set_2
Interfer-bind
fn3_2
C2-set_3
ChitinaseA_N
Sp38
V-set_CD47
ARM_TT21_4th
Fn3_Dep-1_3rd
DUF6377
Motif
Other DBs
NCBI-GeneID:
102397621
NCBI-ProteinID:
XP_045021249
LinkDB
All DBs
Position
1:complement(185080430..185363476)
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AA seq
1419 aa
AA seq
DB search
MVPPFIQPFEFPRFSIGQRVFIPCVVVSGDLPITITWQKDGRPIPASLGVTIDNIDFTSS
LRISNLSLMHNGNYTCIARNEAAAVEHQSQLIVRVPPKFVVQPRDQDGIYGKAVILNCSA
EGYPVPTIVWKFSKGAGVPQFQPIALNGRIQVLSNGSLLIKHVVEEDSGYYLCKVSNDVG
ADVSKSMYLTVKIPAMITSYPNTTLATQGQKKEMSCTAHGEKPIIVRWEKEDRIINPEMA
RYLVSTKEVGEEVISTLQILPTVREDSGFFSCHAINSYGEDRGIIQLTVQEPPDPPEIEI
KDVKARTITLRWTMGFDGNSPITGYDIECKNKSDSWDSAQRTKDVSPQLNSATIIDIHPS
STYSIRMYAKNRIGKSEPSNELSITADEAAPDGPPQEVHLEPISSQSIRVTWKAPKKHLQ
NGIIRGYQIGYREYSTGGNFQFNIISIDTTGDSEIYTLDNLNKFTQYGLVVQACNRAGTG
PSSQEIITTTLEDVPSYPPENVQAIATSPESISISWSTLSKEALNGILQGFRVIYWANLM
DGELGEIKNVTTTQPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIFTRTKEDVPGPPA
GVKAAAASASMVFVSWLPPLKLNGIIRKYTVFCSHPYPTVISEFEASPDSFSYRIPNLSR
NRQYSVWVVAVTSAGRGNSSEIITVEPVAKAPARILTFSGTVTTPWMKDIALPCKAVGDP
SPAVKWMKDSNGTPSLVTIDGRRSVFSNGSFVIRTVKAEDSGYYSCIANNNWGSDEIILN
LQVQVPPDQPRLTVSKTTSSSITLSWLPGDNGGSSIRGYILQYSEDNSEQWGSFPISPSE
RSYRLENLKCGTWYKFTLTAQNGVGPGRISEIIEAKTLGKEPQFSKEQELFASINTTRVR
LNLIGWNDGGCPITSFTLEYRPFGTTVWTTAQRTSLSKSYILYDLQEATWYELQMRVCNS
AGCAEKQTNFATLNYDGSTIPPLIKSVVQSDEGLTTNEGLKMLVTISCILVGVLMLFVLL
LVVRRRRREQRLKRLRDAKSLAEMLMSKNTRTSDTLSKQQQTLRMHIDIPRAQLLIEERD
TMETIDDRSTVLLTDADFGEAAKQKSLTVTHTVHYQSVSQATGPLVDVSDARPGTNPTTR
RNAKAGPTARNRYASQWTLNRPHPTVSTHTLTTDWRLPTPRAAGSMDKESDSYSVSPSQD
TDRARSSMVSTESASSTYEELARAYEHAKMEEQLRHAKFTITECFISDTSSEQLTAGTNE
YTDSLTSSTPSESGICRFTASPPKPQDGGRVMNMAVPKAHRPGDLIHLPPYLRMDFLLNR
SGPGTSRDPSLGQACLEPQKSRTLKRPPVLEPIPMEAASSTASTREGQQWQQGPVATLPQ
REGAELGQAAKMSSSQESLLDSRGHLKGNNPYAKSYTLV
NT seq
4260 nt
NT seq
+upstream
nt +downstream
nt
atggttccaccttttatccagccttttgagtttccaagattctccattggacagcgggtc
ttcatcccgtgcgttgtggtctcaggggacttacccatcaccatcacctggcagaaagat
ggccggccaatcccagcaagcctcggggtgaccattgacaacattgacttcacaagctcc
ttaaggatttccaatctttccctgatgcacaatgggaattatacctgcatagcccgcaat
gaggcagcagctgtggagcaccaaagccagctaattgtgagagttcctcccaagtttgtg
gttcaaccacgggaccaggacgggatttatggcaaggctgtcatcctcaattgctcagct
gagggttaccctgtacccaccatcgtgtggaaattctctaaaggtgctggggttccccag
ttccaaccgattgccctgaatggccgaattcaggtcctcagcaatgggtctctgttgatc
aagcacgtggtggaagaagacagtggctactacctgtgcaaggtcagcaacgatgtgggc
gcggacgtcagcaagtccatgtacctcacggtgaaaattcctgcgatgattacatcctac
ccaaacaccaccctggccactcagggtcaaaagaaggaaatgagctgcacggcccatggt
gagaagcccatcatagtccgctgggagaaagaggaccggatcattaaccccgaaatggcc
cgttatctcgtgtctaccaaggaggtgggggaggaggtgatttctactctgcagattttg
ccaacggtaagagaagattctggcttcttctcctgtcacgctatcaattcttatggggag
gaccgtggaataattcagctcacggtgcaagagcccccagatcctcctgaaattgagatc
aaggacgtgaaggcacgtaccatcaccctcaggtggaccatgggctttgacgggaacagc
cccatcacgggctatgacattgaatgcaaaaataaatcagactcctgggattctgctcag
agaaccaaagacgtttcccctcagctgaactcggccaccatcattgacatccacccttcc
tccacctacagcatccgcatgtacgccaagaaccggattggcaagagtgagcctagcaac
gagctgtccatcaccgcagatgaggcagctcctgacggcccacctcaggaagtccacctg
gagcccatctcttcccagagcatcagggtcacctggaaggctcccaagaaacatttgcaa
aatgggattatccgtggctaccagattggttaccgggagtacagcaccgggggcaacttc
cagttcaacatcatcagtatcgacaccacgggggacagtgagatttacaccctggacaac
ctcaacaagttcacccagtatggcctggtggtgcaggcctgcaaccgggccgggacgggg
ccttcttctcaggaaatcatcaccaccaccctcgaggacgtgcccagttacccccccgaa
aatgtccaagccatagcaacatcaccagaaagcatatcaatatcctggtccacgctttcc
aaggaagccttgaatggaattctccaggggttcagagtcatttactgggccaacctcatg
gacggagagctgggcgagattaaaaatgtcaccaccacgcagccctccctagagctggat
gggctggagaaatacaccaactacagcatccaggtgctggcctttacccgggctggagac
ggcgtccggagcgagcagatcttcacccggaccaaagaggatgttccaggcccccctgcc
ggggtcaaggcggcagcggcctcagcctccatggtcttcgtgtcttggctgccacccctc
aagctgaatggcatcatccgaaagtacacggtcttctgctcccacccctaccccacagtg
atcagcgagtttgaagcctctcctgactcattttcctacagaattcctaacctgagtcgg
aatcgtcagtatagcgtctgggtggtggccgtgacctcagccggcagagggaacagcagt
gaaatcattaccgtggagcctgttgctaaagctcccgcacgaatcctgaccttcagtggc
acggtgactactccctggatgaaagacattgccttgccttgtaaagctgttggggacccc
tctcctgccgtaaagtggatgaaagacagtaacgggacgcccagcctggtaacgattgat
gggcggagaagcgtcttcagcaatggcagctttgtcatccgcactgtgaaggcagaggac
tctggctattacagctgcatcgccaataacaactgggggtcggatgaaattatcttaaat
ttacaagtacaagttccaccagatcagcctcggctcacagtttcaaaaaccacctcttct
tccatcaccctctcgtggctccctggggacaatggaggcagttctataagaggatatata
ctgcagtactccgaggacaacagtgagcagtgggggagttttcccatcagccccagcgaa
cgctcctaccgcctggaaaacctgaagtgtgggacttggtacaagttcactctcactgca
cagaatggagtgggacccgggcgcataagtgagatcatagaagcgaaaacgttgggcaaa
gagccccagttctccaaggagcaggagctcttcgctagcatcaataccacacgtgtgcgg
ctcaacctcattggctggaatgacggcggctgccccatcacgtccttcacactcgagtac
agacccttcgggaccacggtctggaccacagcccagagaacctccctctccaagtcctac
atcctgtacgaccttcaggaggccacgtggtacgagctacaaatgagggtgtgcaacagc
gcgggctgtgcagagaagcagaccaacttcgccacgctcaactacgatggcagtacaatc
cccccactcattaagtcagttgtccaaagtgatgaagggctgacaaccaacgaggggctc
aagatgctggtgaccatctcctgtatcctggtgggggtcctgatgctgtttgtgctcctg
ctggtggttcggaggaggaggcgtgagcagaggctgaagcggctgagagatgcaaagagt
ttagctgaaatgctcatgagtaaaaatacccggacttcagacaccttgagcaagcagcag
caaaccctgaggatgcatattgacatacccagggctcagctcttgattgaagagagagac
acaatggagaccattgatgatcgctccacagtcctgttgacagatgctgacttcggagag
gccgcgaaacagaagtccctgacagtgacacacacggtccattaccaatcggtgtcgcag
gccacggggcccttggtggatgtttcagacgctcggccaggaaccaatcccaccaccagg
aggaatgccaaggctgggcccacggcgaggaaccggtatgccagccagtggaccctcaac
agaccccaccccaccgtttcaacacacaccctcaccaccgactggaggctgccaacaccc
agggccgcaggctcaatggacaaggagagtgacagctacagcgtcagcccctcacaagac
acagatcgagcgcgaagcagcatggtctccacagaaagtgcctcctccacttatgaagaa
ctggccagggcctacgagcacgccaagatggaagagcagctgaggcacgccaagttcacc
atcacagagtgcttcatctcagacacatcgtccgagcagttgacggcagggacaaacgag
tacacagacagtctgacctccagcaccccttcggagtcagggatctgcaggttcaccgcc
tctccccccaaacctcaggatggaggacgagtgatgaacatggcagttccaaaggcacat
cggccaggtgacctcatccacttgcctccataccttcgaatggacttcttattgaaccga
agtggtccaggcacaagcagggacccgagcttagggcaggcatgcttggagccccagaaa
agtcggaccctgaaacgccccccggtccttgagcccatccccatggaggcagcctcctcc
acggcctccacgagggagggacagcagtggcagcaggggcctgtggccacattacctcag
cgcgagggggcagagctgggacaggcagccaagatgagcagctcccaggaatcgctgctg
gactcacggggccatttgaaaggcaacaatccctatgccaaatcctacaccctggtataa
DBGET
integrated database retrieval system
