Bubalus bubalis (water buffalo): 102397629
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Entry
102397629 CDS
T05912
Name
(RefSeq) synphilin-1 isoform X1
KO
K04558
synphilin-1
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub05012
Parkinson disease
bbub05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05012 Parkinson disease
102397629
05022 Pathways of neurodegeneration - multiple diseases
102397629
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GFIT
Motif
Pfam:
Ank_2
SNCAIP_SNCA_bd
Ank_4
Ank
Ank_5
Ank_3
DUF1836
Motif
Other DBs
NCBI-GeneID:
102397629
NCBI-ProteinID:
XP_025148789
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All DBs
Position
9:79676152..79841876
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AA seq
969 aa
AA seq
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MEAPEYLDLDEIDFSDDISYSVTSLKTIPELCRRCDSQNEDRSVSSSGWNCGVSTLITNT
QKPTGIADVYSKFRPVKRVSPLKHQPETLENNESDDQKNQKAEYQKGSDPDPGPQPEELG
PRAVEGSPQRKSTEPSTLLGELEHYDLDMDEILDVPYIKSSQQLASFTKSTSEKRILGLC
TSINGLSGKACPTGSAESSPSNMTPFCVLSPVKSPHLRKASSVVQDQQKLSPEESESSPP
PVKCGSAYEPENQGKDFLYKTFSDPHSRKVDKAMAPDCQLRAFHLQSSATDPKLEEQIGG
MNWTSSQGPEERNEYLKKVKSILNIVKEGQISLLPHLAADNLDKIHDESGNNLLHVAASQ
GHAECLQHLTSLMGEDCLNERNVEKLTPAGLAIKNGQLECVRWMVSETEAIAELSCSKDF
PSLIHYAGCFGQEKILLWLLQFMQEQGISLDEVDQDGNSAVHVASQHGYLGCIQTLVEYG
ANVTMQNHAGEKPSQSAERHGHSLCSRYLVVVETCMSLASQVVKLTKQLKEQTMQRVTLQ
NQLQQLLEAQKSEGKSLLSSPSSPSSPACRKSQWKSPDTEDESVAKSKSGVQEGIQVLGS
LSASSRARAKVKDEDSDKILRQLLGKDISENVCTQEKLSLEFQDAQTSSKHSKKIPLEKR
ELKLARLKQLMQRPLSEADTDSNNSEDPKGTPVRKVDRPRPQPIVESVEGVDSAESLHLM
IKKHTLASGRRFPFSIKASKSLEGHSPSPTSESSEPDLESQCPGSGNTPSSQPSGEAPQP
SPDSTAAQKVATSPKSALKSPSSKRRTSQNSKLRVTFEEPVVQMEQTSLELNGEKEREKG
RTLQRTSAASESGDQLKRPFGTFRSIMETLSGNQNNNNNYQASNQLKTSTLPLTSLGRKV
TDGKGNTGSSASKGKNKAEMYGSCINLSSNTLIEEHLHNYARHDDISRKMKKSYNTKHVA
EPESKELFL
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atggaagcccctgaataccttgatttggatgaaattgacttcagtgatgacatctcttat
tcagtcacatcactcaagaccatcccggaactgtgccgaagatgtgattcgcaaaacgaa
gacagatcagtgtctagctctggctggaattgtggtgtctcaactcttattacaaacacg
cagaagcccacaggaatcgccgatgtgtatagtaagttccgcccagtgaaaagagtgtcc
ccattgaaacaccagccagagactctggagaacaatgaaagtgatgaccaaaagaaccaa
aaggcagagtaccagaaagggagtgatcctgacccaggcccccaacccgaggagctcggc
cccagagctgtcgagggcagcccccaaaggaagagcacggaacccagcaccctgctgggg
gagctggaacattatgacctcgacatggatgagattctcgacgtgccttacatcaaatcc
agtcagcagctggcctctttcaccaagtcgacttcggaaaaaagaattttgggtttatgc
acaagcattaatggcctttccggcaaagcttgccctaccggaagtgccgagagctccccg
tctaacatgacaccattttgtgtcctttctcctgtgaaaagccctcacttgagaaaagca
tcctctgttgtccaggaccaacagaagctctcccctgaagaatcagagagttctcctcct
cccgttaaatgtggctctgcttatgagcctgaaaaccagggtaaggacttcctatacaag
accttcagtgatcctcacagtcggaaagttgacaaggcaatggcaccagattgccagctc
agggccttccatctgcagtcctcagcaacagaccccaaactagaggagcagattggtggc
atgaactggaccagctcccagggacccgaagaaaggaacgagtacctgaaaaaagtaaaa
agcatcttgaacattgttaaagaaggacaaatatctctcctgccacacctagctgccgac
aatctagacaaaattcatgacgaaagtggaaacaatctcttacacgttgccgcatcgcag
ggacacgcagagtgcctgcagcacctcacttctttgatgggagaagactgcctcaacgag
cgaaatgtggagaagttgactcccgcaggcctggccatcaagaatggtcagttggagtgt
gtacgctggatggtgagtgaaacagaagccattgctgaattgagttgttctaaggatttt
ccaagccttattcattacgcaggttgttttggtcaggagaagattctgctgtggcttctt
cagttcatgcaagagcagggcatctcgctggatgaagtggaccaagatggcaacagtgct
gttcatgtggcctcacagcatggctacctcgggtgcatacagaccctggttgagtacgga
gcaaatgtcactatgcagaaccacgctggggagaagccctcccagagcgccgagcgccat
ggacacagcctgtgctcccggtacctggtggtggtggagacctgcatgtcgctagcctcc
caggtggtgaagctcaccaagcagctgaaggaacagacaatgcaacgtgtcacactgcag
aaccagctccaacaacttttagaagcccagaaatcagagggcaagtcactcctttcttca
cccagttcaccatcctctccagcttgcagaaagtcccagtggaagtccccagacacagag
gatgagtctgtagccaaaagcaaatcaggagtccaggaggggattcaggttcttggaagc
ctgtcagcatccagccgggctagggccaaagtgaaagacgaagattctgataaaatccta
cgtcagttattaggaaaagatatttcagagaatgtctgcacccaggaaaagctgtcgttg
gaattccaggatgctcagacttcctcgaaacattccaaaaagatccccctggagaagagg
gaactgaagttagcgcggctgaagcagctgatgcagcggccactgagcgaggctgacacg
gactccaacaactctgaggaccccaagggcacccctgtgaggaaggttgacaggcccaga
ccgcagcccattgtggagagtgtggagggcgtggacagtgcagaaagcctccacttgatg
atcaagaaacacaccttggcatcaggacgcaggtttccatttagtatcaaggcctccaaa
tccctggagggccacagcccatcccccacctcagagagcagcgagccggacttggaatcc
cagtgtccaggctcaggaaacaccccctcaagccaaccctctggagaagcccctcagccc
agccctgacagcacagccgcccagaaagtagccacgagtcccaagagtgccctcaagtcc
ccgtcgtccaagcgccggacatctcagaactcaaaactcagagtgacctttgaggagccg
gtggtgcagatggagcaaactagccttgaactaaacggagaaaaggagcgagaaaaaggc
aggaccctccagcggacgtctgctgctagcgaatcaggggatcagctcaaaaggcctttt
ggaaccttccgatccattatggagacgctcagtggcaaccagaacaataataataactat
caggcatccaaccagttgaagacctccaccctccccttaacctcccttgggaggaaggtg
acagacggtaagggaaacaccgggagctctgctagcaaaggaaaaaataaggcggagatg
tacggcagctgcatcaatctttcctctaacacgctgattgaagagcatctgcataactat
gcacggcatgatgacatcagtagaaaaatgaagaaatcctacaatacaaagcatgttgct
gagccagaatcaaaagaactcttcttataa
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