Bubalus bubalis (water buffalo): 102397762
Help
Entry
102397762 CDS
T05912
Symbol
KARS1
Name
(RefSeq) lysine--tRNA ligase isoform X2
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
102397762 (KARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bbub01007
]
102397762 (KARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bbub03016
]
102397762 (KARS1)
Enzymes [BR:
bbub01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
102397762 (KARS1)
Amino acid related enzymes [BR:
bbub01007
]
Aminoacyl-tRNA synthetase
Class II (A)
102397762 (KARS1)
Transfer RNA biogenesis [BR:
bbub03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
102397762 (KARS1)
Prokaryotic type
Other AARSs
102397762 (KARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Peptidase_M16
Motif
Other DBs
NCBI-GeneID:
102397762
NCBI-ProteinID:
XP_006063418
LinkDB
All DBs
Position
18:complement(2643020..2657275)
Genome browser
AA seq
595 aa
AA seq
DB search
MADVQGAEVKVDCGEPKLSKSELKRRLKAEKKIAEKEAKQKELSEKQLSQAAASNHSAED
GVAAEEESLDPNQYFKIRSQAIHQLKVNGEDPYPHKFHVDISLTHFIQEYSHLQPGDHLT
DITLKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFIRINNKLRRGDII
GVQGNPGKTKKGELSIIPYEITLLSPCLHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQ
KFIIRSKIITYIRSFLDELGFLEIETPMMNIIPGGAVAKPFITYHNELDMNLYMRIAPEL
YHKMLVVGGIDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYHDLMEITEKMISGMV
KHITGSYKVTYHPDGPEGQACEIDFTPPFRKISMVEELEKALGMKLPETNLFETEETRRI
LDDICVAKDVECPPPRTTARLLDKLVGEFLEVTCINPTFICDHPQIMSPLAKWHRSKEGL
TERFELFVMKKEICNAYTELNDPVRQRQLFEEQAKAKAAGDDEAMFIDETFCTALEYGLP
PTGGWGMGIDRVTMFLTDSNNIKEVLLFPAMKPEDKKENVATKDILESTAPGTSV
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgtgcagggcgctgaagttaaagtggactgcggcgagccgaaactgagcaaa
agtgagctaaagagacgcctgaaagctgagaagaaaatagcggagaaggaggccaagcag
aaggagctcagtgagaaacagctgagtcaggctgccgccagcaatcacagtgctgaagat
ggcgtggctgcggaggaggagagcttggacccaaatcaatacttcaaaatccgaagccaa
gcaatccaccagctgaaggtcaatggggaagatccatacccacacaagttccatgtggac
atctcgctcactcacttcatccaagaatacagtcacctgcagcctggggaccacctgact
gacatcaccttaaaggtggcaggtaggatccatgccaaaagagcttctggaggaaagctc
atcttctatgaccttcgaggagagggggtcaagttgcaagtcatggccaattccaggaat
tacaaatctgaagaagaatttattcgtattaacaacaaactgcgccggggagacataatt
ggagtccagggcaatcctgggaaaaccaagaagggcgagctaagcatcatcccctatgaa
atcacactgctgtctccttgcctgcacatgttacctcatcttcacttcggcctcaaagac
aaggaaacacggtatcgtcagagatacttggacttgattctgaatgactttgtgaggcag
aagtttatcatccgctctaagatcatcacgtatataagaagtttcttggatgaattggga
ttcctagagattgaaactcccatgatgaacatcatcccagggggagctgtggccaagcct
tttatcacctaccacaatgagctggacatgaatttatatatgagaattgctccggaactc
taccataagatgctggtggttggtggcatcgaccgggtttatgaaattggacgccagttc
cggaatgaaggaattgatttgactcacaatcctgagttcaccacctgtgaattctacatg
gcctatgccgactatcatgatcttatggaaatcacagagaagatgatttcagggatggtg
aaacacattacaggcagttacaaggtcacctaccatccagatggcccagaaggccaagcc
tgtgagattgacttcaccccacccttccggaaaatcagcatggtagaagagcttgagaaa
gccctgggcatgaaactgccagaaacgaacctcttcgaaactgaagaaactcgcagaatc
cttgatgatatctgtgtggcaaaagatgtcgagtgccctccaccccggaccaccgccagg
ctccttgataagcttgtcggggagttcctggaagtgacgtgcatcaatcctaccttcatc
tgtgatcacccacagataatgagccctctggccaaatggcaccgctctaaagagggtctg
actgagcgctttgagctgtttgtcatgaagaaggaaatatgcaatgcctacactgagctg
aacgaccctgtgcgccagcggcagctctttgaagaacaggccaaggccaaggccgctggc
gatgatgaggccatgttcatagatgaaaccttctgcaccgccctggagtacggactgccc
cccacggggggctggggcatgggcatcgaccgcgtcaccatgtttctcacagactccaat
aacatcaaggaagtgcttctgtttcctgccatgaaacctgaagacaagaaggagaatgta
gccaccaaggatatcctggaaagcacagctcctggcacttctgtctaa
DBGET
integrated database retrieval system
