Bubalus bubalis (water buffalo): 102397891
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Entry
102397891 CDS
T05912
Symbol
SHANK3
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 3 isoform X2
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
102397891 (SHANK3)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
SAM_1
Ank
Ank_4
SAM_2
SH3_2
Ank_3
PDZ_6
SH3_9
Ank_5
PDZ
SH3_1
FERM_f0
Motif
Other DBs
NCBI-GeneID:
102397891
NCBI-ProteinID:
XP_025138355
LinkDB
All DBs
Position
4:complement(79600..130856)
Genome browser
AA seq
1800 aa
AA seq
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MQLSRAAAAAAAAAPAEPSEPLSPAPAPAPAPPGPLPRSAADGAPVGSRGGPGRGEEPRG
AQLPAASGPGPGAGMDGPGASAVIVRVGIPDLQQTKCLRLDPAAPVWAAKQRVLCALNHS
LQDALNYGLFQPPSRGRAGKFLDEERLLQEYPPNLDTPLPYLEFRYKRRVYAQNLIDDKQ
FAKLHTKANLKKFMEYVQLHSTEKVARLLDKGLDPNFHDPDSGECPLSLAAQLDDATDLL
KVLKNGGAHLDFRTRDGLTAVHCATRQRNAAALTTLLDLGASPDYKDSRGLTPLYHSALG
GGDALCCELLLHDHAQLGTTDENGWQEVHQACRFGHVQHLEHLLFYGADMGAQNASGNTA
LHICALYNQESCARVLLFRGANKDVRNYNSQTAFQVAIIAGNFELAEVIKTHKDSDVVPF
RETPSYAKRRRLAGPSALASPRPLQRSASDINLKGEVQPAASPGPSLRSLPHQLLLQRLQ
EEKDRDRDGDQQNDSGPATGRGSQSKISPSGPGGPGGPGPAPGPGPAPPAPPAPPPRGPK
RKLYSAVPGRKFIAVKAHSPQGEGEIPLHRGEAVKVLSIGEGGFWEGTVKGRTGWFPADC
VEEVQMRQYDARHETREDRTKRLFRHYTVGSYDSLSAHSDYVIDDKVAVLQKRDHEGFGF
VLRGAKAETPIEEFTPTPAFPALQYLESVDVEGVAWRAGLRTGDFLIEVNGVNVVKVGHK
QVVALIRQGGNRLVMKVVSVTRKPEEDGARRRAPPPPKRAPSTTLTLRSKSMTAELEELE
KLDEILAAAAEPALRPDIADADSRAATVKQRPTSRRITPAEISSLFERQGLPGPEKLPGS
LRKGIPRTKSVGEDEKLASLLEGRFPRSTSMQDSVREGRGIPPPPQTAPPPPPAPYYFDS
GPPPAFSPPPPPGRAYDTVRSSFKPGLEARLGAGAPGLYDSGAALGPLPYPERQKRARSM
IILQDSAPEAADASRPPPAATPPERPKRRPRPPGPDSPYANLGAFSASLFAPSKPQRRKS
PLVKQLQVEDAQERAALAVGSPGPVVGSFAREPSPTHRGPRPSGLDYGPGDGPGLAFGGP
APSKDRRLEERRRSTVFLSVGAIEGTSPSADMPSLQPSRSIDERLLGAGATTTGRDLLLP
SPVSALKPLVSGPSLGPSGSTFIHPLTGKPLDPSSPLALALAARERALASQAPSRSPTPV
HSPDTDRPGPLFVDVQARDSERGPLASPAFSPRSPAWVPVPARREPEKVPREERKSPEDK
KSMILSVLDTSLQRPAGLIVVHATSNGHEPSGLGAEEQRPGTPELAPAPTQSAVVAEPLP
SPRAQPPGSAPTDPGPGQGSSEEEPELVFAVNLPPAQLSSSDEETREELARIGLVPPPEE
FANGVLLATPLPGPGPSPTTVPGPASGKPSSEPPPAPESAADSGVEEADTRSSSDPHLET
TSTISTVSSMSTLSSESGELTDTHTSFADGHTFLLEKPPVPPKPKLKSPLGKGPVTFRDP
LLKQSSDSELMAQQHHAATAGLASAAGPARPRYLFQRRSKLWGDPVESRGLPGPEDDKPT
VITELSSRLQQLNKDTRSLGEEPAGGLGGLLDPAKKSPIAAARLFSSLGELSTISAQQRS
PGGPGGGASYPVRPGGRYPVARRAPSPVKPASLERVEGLGAGAGGAGRPFGLTPPTILKS
SSLSIPHEPKEVRFVVRSVSARSRSPSPSPLPSPAPGPGPGAPSPRRPFQQKPLQLWSKF
DVGDWLESIHLGEHRDRFEDHEIEGAHLPALTKDDFVELGVTRVGHRMNIERALRQLDGS
NT seq
5403 nt
NT seq
+upstream
nt +downstream
nt
atgcagctgagccgcgccgccgccgccgccgccgccgccgcccctgcggagccctcggag
ccgctgtccccggcgccggccccggccccggctccccccggccccctcccgcgcagcgcg
gccgacggggctccggtggggagccggggggggccggggcgcggcgaggagccccggggc
gcccagctcccggccgctagcggccccggtccgggcgcggggatggacggccccggggcc
agcgccgtgatcgtgcgcgtcggcatcccagacctgcagcagacgaagtgcctgcgcctg
gacccggccgcgcccgtttgggccgccaagcagcgcgtgctctgcgccctcaatcacagc
ctccaggacgcgctcaactacgggctcttccagccgccctcccggggccgcgccggcaag
ttcctggacgaggagcggcttctgcaggaatacccgcccaacctggacacgcccctgccc
tacctggagtttcgatacaagagacgagtttatgcccagaacctcattgatgataagcag
tttgcaaagcttcacacaaaggcgaacctgaagaagtttatggaatatgtccagctgcac
agcacggaaaaggtggcccgcctgctggacaaggggctggaccccaatttccacgatcct
gactcaggagagtgtccactgagcctggctgcccagctggacgatgccaccgacctgctg
aaggtgctgaagaatggcggcgcccacctggacttccgcacgcgagacgggctcacggcc
gtgcactgtgccacgcgccagcggaatgcggccgccctgacgaccctgctggacctgggc
gcttcaccggactacaaggacagccgtggtctgacgcccttgtaccacagcgccctgggc
gggggggatgccctctgttgcgagctgctcctgcacgaccatgctcagctggggaccacc
gacgagaacggctggcaggaagtccaccaggcctgccgcttcgggcatgtacagcacttg
gagcacctcctgttctacggagctgacatgggggctcagaacgcctctgggaacacagcc
ttgcacatctgtgccctctacaaccaggagagctgtgcccgtgtcctgcttttccgcgga
gccaacaaggatgtccgcaattacaatagccagacagccttccaggtggccatcatagcg
gggaactttgagctcgcggaggtcatcaagacccacaaagattcggacgttgtgccattc
agggaaacccccagctacgcgaagcggcggcggctggcgggccccagcgccctggcctcg
cctcggcccctgcagcgctcagccagtgacatcaacctgaagggcgaggtgcagccggca
gcttctcctgggccttcactgcgaagcctcccccaccagctgctgctccagcgactgcag
gaggagaaagaccgggaccgggatggggaccagcagaacgacagcggccctgccacgggc
aggggcagccagagcaagatcagcccgagcgggcccggcggccccggcggccccggcccc
gcgcccggccccggcccggcgccccccgcgccccccgcgccgccgccccggggcccgaag
cggaaactttacagcgcagtccccggccgcaagttcatcgccgtgaaggcgcacagcccg
cagggcgagggcgagatcccgctgcaccgcggcgaggccgtgaaggtgctcagcattggg
gagggcggtttttgggaggggaccgtgaaaggccgcacgggctggttcccggctgactgc
gtggaggaggtgcagatgagacagtatgacgcccgccacgaaacccgtgaggaccggaca
aagcgacttttccgccactacacggtgggctcctacgacagcctctctgcacacagtgac
tatgtcattgacgacaaggtggctgtcctgcagaaacgggaccacgaaggctttggtttt
gtgctccggggggccaaagcagagactcccatcgaggagttcacgcccacgccggccttc
cctgcgctccaatacctcgagtcggtggatgtggagggcgtggcctggagggcagggctg
cgcacgggagacttcctcatcgaggtgaacggcgtgaacgtggtgaaagtcggacacaag
caggtcgtggctctgatccgccagggcgggaaccgcctcgtcatgaaggtggtgtcagtg
accaggaagcccgaagaggatggggctcgacgcagagccccgccgccccctaagagagcc
cccagcacgacgctgaccctgcgctccaagtccatgacagcagagcttgaggagcttgag
aagctggatgagatcctggcggccgccgcggagccggcactgaggcccgacatcgcggat
gcggactcaagagcggccaccgtcaagcagcggcccaccagccgcaggatcacccctgct
gagatcagctcactgtttgagcgccagggcctcccaggcccagagaagctgccaggctcc
ctgcggaaggggattccacggaccaagtctgtaggggaggacgagaagctggcgtccctg
ctggaggggcgcttcccgaggagcacatcgatgcaggactcggtgcgcgagggccgtggc
atcccgccccctccgcagaccgcgccgccgccccctcccgccccctactacttcgactct
gggccgccccccgccttctcgccaccgccgcctccgggccgcgcctacgacaccgtgcgc
tccagcttcaagcccggcctggaggcgcgcctgggcgcgggcgccccgggcctgtatgat
tcaggcgcggccctgggtccgctgccttacccggagcggcagaagcgcgcgcgctccatg
atcatcctgcaggactcggcgcccgaggcggccgacgcctctcggcccccgccagcggcc
accccgccggaacgccccaagcggcggcctcggccgccgggccccgacagcccctacgcc
aacctgggcgcgttcagcgccagcctcttcgcgccgtccaaacctcagcgccgcaagagc
ccgctggtgaagcagctgcaggtggaggatgcgcaggagcgcgcggccctggccgtgggc
agccccggcccggtcgtcggcagcttcgctagggagccctccccgacgcaccgcggtcct
cggcccagcggcctcgactacggccccggagacggccccgggctggcgtttggcggcccg
gccccaagcaaggaccggcggctggaggagcggcggcgctccaccgtgttcctgtctgtg
ggcgccatcgagggcacctctccgagcgcggacatgccttccctgcagccctcgcgctcc
atcgacgagcgccttctgggagccggcgccaccaccaccggccgcgacctgctgctgccc
tccccagtctctgctctgaagccattggtcagcggcccgagccttgggccttccggctcc
actttcatccacccgctcaccgggaaacccctggaccccagctcgcccttggccctggcc
ctggcggctcgcgagcgggctctggcctcccaggcgccctcccggtccccgacacctgtg
cacagccccgacaccgaccggcccgggcccttgtttgtggatgtgcaggcccgggactcg
gagcgagggcctctggcttcgccagccttctcccccaggagcccagcctgggttcccgtg
cctgcgcggagggagcccgagaaagtgccccgggaggagcgcaagtctccggaggacaag
aagtccatgatcctcagcgtcctggacacgtccctgcagcggcccgctggcctcatcgtt
gtgcacgccaccagcaacgggcacgagcccagtgggctgggggccgaagagcagcgccct
ggcactccggagctggccccggcccccactcagtcagctgtggtcgcagagcccctgccg
agcccccgggcccagccccccggcagtgcccccaccgaccccgggcccggccagggcagc
tccgaggaggagccggagctggtattcgctgtgaacctgccgccagcccagctgtcctcc
agcgacgaggagaccagagaggagctggcccgcattggactcgtgccgcctcccgaagag
tttgccaacggggttctgctggccacgccactccccggccccggcccctcgcccaccacg
gtgccaggcccggcctcagggaagccgagcagcgagccgccgcccgccccggagtccgca
gcggattcgggggtggaggaggccgacacgcgcagctccagcgacccccacctggagacc
acgagcaccatctccaccgtgtccagcatgtccaccctgagctcggagagcggggagctc
acggacacccacacctccttcgccgatggacatacttttctactcgagaagccaccagtg
cctcccaagcccaagctcaagtccccgctggggaaggggccggtgaccttcagggacccg
ctgctgaagcagtcctccgacagtgagctcatggcccagcagcaccacgccgccaccgcc
gggctggcctctgctgccgggcctgctcgccctcgctacctcttccagagaaggtccaag
ctgtggggggaccccgtcgagagccgggggctccctgggcctgaagacgacaagccaact
gtgatcaccgagctcagctcccgcctgcagcagctgaacaaagacacccgctccctgggg
gaggagccggccggcggcctgggcggcctgctggaccccgccaagaagtctcccatcgcg
gcagctcggctcttcagcagcctcggtgagctgagcaccatctcagcgcagcagcgcagc
cctgggggcccgggcggcggggcctcctacccggtgcggcccggcggccgctaccctgtg
gcgcggcgcgccccgagcccagtgaagcccgcgtcgctggagcgggtggaggggctgggg
gcgggggcggggggcgcggggcggcccttcggcctcacgccccccaccatcctcaagtcg
tccagcctctccatcccgcatgagccgaaggaggtgcgcttcgtggtgcgcagcgtgagc
gcgcgcagccgctcgccctcgccttcgccgctgccctcgccagcgcccggcccgggcccc
ggggcccccagcccgcgccggcccttccaacaaaagcccctgcaactctggagcaagttc
gacgtgggcgactggctggagagcatccacttgggcgagcaccgcgaccgcttcgaggac
cacgagatcgagggtgcgcacctgccggcgctcaccaaggacgacttcgtggagctgggc
gtcacgcgcgtgggccaccgcatgaacatcgagcgcgcgctcaggcagctggacggcagc
tga
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