Bubalus bubalis (water buffalo): 102397910
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Entry
102397910 CDS
T05912
Symbol
CDH12
Name
(RefSeq) cadherin-12 isoform X1
KO
K06804
cadherin 12, type 2, N-cadherin 2
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
102397910 (CDH12)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bbub04515
]
102397910 (CDH12)
Cell adhesion molecules [BR:
bbub04515
]
Cadherins
Major cadherins
102397910 (CDH12)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_FAT4_N
Ig_CLSTN
Ig_Cad99C_N
Cadherin_CELSR2_9th
Cadherin_2
Stevor
DUF443
Motif
Other DBs
NCBI-GeneID:
102397910
NCBI-ProteinID:
XP_025126460
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Position
19:50220503..51434098
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AA seq
794 aa
AA seq
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MLTRNCLSLLLWVLFDGGLLTPLQPQPQQTLATEPRENVIHLPGQRSHFHRVKRGWVWNQ
FFVLEEYMGSEPQYVGKLHSDLDKGEGTVKYTLSGDGAGTVFTIDETTGDIHAIRSLDRE
EKPFYTLRAQAVDIETRKPLEPESEFIIKVQDINDNEPKFLDGPYIASVPEMSPVGAYVL
QVKATDADDPTYGNSARVVYSILQGQPYFSIDPKTGVIRTALPNMDREVKEQYQVLIQAK
DMGGQLGGLAGTTIVNITLTDVNDNPPRFPKSIFHLKVPESSPVGSAIGRIRAVDPDFGQ
NAEIEYNIVPGDGGNLFDIVTDEDTQEGVIKLKKPLDFETKKAYTFKVEACNVHLDHRFH
SAGPFKDTATVKISVLDVDEPPVFSKPLYTMEVYEDTPVGTIIGAVTAQDLDVGSSAVRY
LIDWKSDGDSYFTIDATEGTIATNELLDRESTAQYNFSIIASKVSNPLLTSRVNILINVL
DVNEFPPEISVPYETAVCENAKPGQIIQIVSAADRDLSPAGQQFSFKLSPEAAIKPNFTV
RDFRNNTAGIETRRNGYSRRQQELYFLPIVIEDSSYPVQSSTNTMTIRVCRCDSDGTILS
CNVEAIFLPVGLSTGALIAILLCIVILLAIVVLYVALRRQKKKDTLMTSKEDIRDNVIHY
DDEGGGEEDTQAFDIGALRNPKVIEDNNIRRDIKPDSLCLPRQRPPVEDNTDIRDFINQR
LQENDVDPTAPPYDSLATYAYEGSGSVADSLSSIESLTTEADQDYNYLTDWGPRFKVLAD
MFGEEESYNPDKVT
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgcttacaaggaactgtttatccctactgctctgggtcctgtttgatggaggtctccta
acaccacttcaacctcagccacaacagactttagccacagaaccaagagagaatgttatc
cacctaccaggacaacgatcacatttccaccgagttaaacgtggctgggtatggaatcaa
ttttttgtgctggaggaatacatgggctccgagcctcagtatgtgggaaagctccattct
gacttagataaaggagagggcactgtaaaatacaccctctcaggagatggcgctggcacc
gtttttaccattgatgaaactacaggggacattcatgccataaggagcctggatagagag
gaaaaacctttctacacccttcgtgctcaggctgtggacatagaaaccaggaagcccctg
gagcctgaatcagaattcatcatcaaagtgcaggatattaatgataatgagccgaagttt
ttggatggaccttacattgctagtgttccagaaatgtctcctgtgggtgcatatgttctc
caagtcaaggccacggatgctgatgacccaacttatggaaacagtgccagagtcgtttac
agcattcttcagggacaaccttatttctctattgatcccaagacaggtgttattagaaca
gctttgccaaacatggacagggaagtcaaagaacaataccaagtcctcatccaagccaag
gatatgggcggacaactgggagggttagctggaacgacaatagtcaacatcaccctcacg
gatgtcaatgacaatccacctcgattccccaaaagcattttccatctgaaagttcccgaa
tcttctcctgttggctcagctattggaagaataagagccgtggatcctgattttggacaa
aatgcagaaattgaatacaatattgttccaggagatgggggaaatttgtttgacatcgtc
acagatgaggacacacaagaaggagttatcaaattgaaaaagccattagattttgaaaca
aagaaagcttacacttttaaagtagaggcctgcaacgttcacctggaccaccggtttcac
tccgcgggccctttcaaggacactgccacggtgaagatcagtgtgctggacgtggacgag
ccgccggtgttcagcaagccactctacaccatggaggtttatgaagacactcccgtaggg
accatcattggtgctgtcactgcacaagacctggacgtgggcagcagcgccgttaggtac
ctcatagattggaagagtgatggggacagctactttacaatagatgcgactgaaggaacc
atcgccactaatgaattactagacagagaaagcaccgcgcagtataatttctccataatt
gcgagtaaagttagtaacccattattaaccagcagagtcaacatattgattaatgtccta
gatgtcaatgaatttcctccagaaatatctgtgccatatgagacagctgtgtgtgaaaat
gccaaaccaggacagataattcagatagtcagtgccgcagaccgagatctttcacctgct
ggacagcaattctcctttaaattatcacctgaagctgccatcaaaccaaattttacagtt
cgtgacttcagaaacaacacagctggaattgaaacccgaagaaatggatacagccgcagg
cagcaagagttgtatttcctccccatagtaatagaagacagcagttatcctgtccagagc
agcacaaacacaatgactattcgagtctgtcgatgtgactctgatggtaccatcctgtct
tgtaacgtggaagcaatttttctacctgtaggacttagcactggggctttgattgcaatc
cttctttgcattgttatactcttagccatagttgtgctgtatgtagctctgagaaggcag
aagaagaaagacaccttgatgacctctaaggaagacatcagagacaacgttatccattat
gatgatgaaggaggtggggaggaggacacccaggcttttgacattggtgctctgagaaac
ccaaaagtgattgaagataacaacattcgcagggatataaaaccagactctctctgttta
cctcgtcagagaccaccagtggaagataacacagacataagggatttcattaatcaaagg
ctacaagaaaatgatgtggaccccacagccccaccatatgattcactggcaacatatgcc
tatgaaggcagcggatcagtagccgactctcttagctccatagagtctctgaccacagaa
gcagaccaggactacaactacctgacagattggggaccccgctttaaagtcttggcagac
atgtttggagaagaagagagttataaccctgataaagtcacttag
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