Bubalus bubalis (water buffalo): 102398121
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Entry
102398121 CDS
T05912
Symbol
SFPQ
Name
(RefSeq) splicing factor, proline- and glutamine-rich isoform X2
KO
K13219
splicing factor, proline- and glutamine-rich
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bbub01009
]
102398121 (SFPQ)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbub03021
]
102398121 (SFPQ)
03041 Spliceosome [BR:
bbub03041
]
102398121 (SFPQ)
Protein phosphatases and associated proteins [BR:
bbub01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102398121 (SFPQ)
Transcription machinery [BR:
bbub03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
102398121 (SFPQ)
Spliceosome [BR:
bbub03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
102398121 (SFPQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_7
Motif
Other DBs
NCBI-GeneID:
102398121
NCBI-ProteinID:
XP_025144906
LinkDB
All DBs
Position
6:110203552..110219546
Genome browser
AA seq
669 aa
AA seq
DB search
MSRDRFRSRGGGGGGFHRRGGGGGRGGLHDFRSPPPGMGLNQNRGPMGPVPGQGGPKPQI
PPPPPHQQQQQPPPQQPPPQQPPPLQPPPHQPPHQQPPHQQPPPPPQDSSKSVVPQGPGS
APGVGSAPPATGSAPPATPPTSGAPTGPGPTPTPPPAVTSAPPGAPPPAPPSSGVPTTPP
QAGGPPPPPPAGGPVPGPKQGPGPGGPKGGKMPGGPKPGGGPGLSTPGGHPKPPHRGGGE
PRGGRQHHPPYHQQHHQGPPPGGPGGRSEEKISDSEGFKANLSLLRRPGEKTYTQRCRLF
VGNLPADITEDEFKRLFAKYGEPGEVFINKGKGFGFIKLESRALAEIAKAELDDTPMRGR
QLRVRFATHAAALSVRNLSPYVSNELLEEAFSQFGPIERAVVIVDDRGRSTGKGIVEFAS
KPAARKAFERCSEGVFLLTTTPRPVIVEPLEQLDDEDGLPEKLAQKNPMYQKERETPPRF
AQHGTFEYEYSQRWKSLDEMEKQQREQVEKNMKDAKDKLESEMEDAYHEHQANLLRQDLM
RRQEELRRMEELHNQEMQKRKEMQLRQEEERRRREEEMMIRQREMEEQMRRQREESYSRM
GYMDPRERDMRMGGGGAMNMGDPYGSGGQKFPPLGGGGGIGYEANPGVPPATMSGSMMGS
DMVRMIDVG
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgggaccggttccgaagccggggaggtggcggtggcggcttccaccgacgcgga
ggaggaggcggccgcggcggcctccacgacttccgctccccgccgcccggcatgggcctc
aatcagaatcgcggacccatggggcccgtgccgggccaaggtggccccaagcctcagatc
ccgccaccgcctccgcaccagcaacagcagcagccaccgccgcagcagccgccaccacag
cagccgccgccgcttcagcccccgccgcaccagccgccccatcagcagccgccgcaccag
cagccgccgccgccgccacaggactcatccaagtctgttgttcctcaaggacccggttcg
gctcccggagtaggcagcgcccctccggccaccggctcggcgccgcccgccacacccccg
acctcgggggcccccacggggccaggccccaccccgaccccgccgcccgctgtcacctcg
gcgcccccaggtgcgcctccaccggctccgccgagcagtggggtgcccaccaccccccct
caggctgggggcccgccgcctccaccacctgcagggggcccggtgcccgggcctaagcag
ggcccgggacccggcggccccaagggcggcaaaatgccaggcgggccgaagcctggcggc
ggcccgggcctaagcactcctggcggccaccctaagccgccgcaccgaggtggcggggag
ccccgcgggggccggcagcaccatccgccctaccaccagcagcaccaccaagggccgccg
cccggagggcccggcggccgcagcgaggaaaagatttcggactctgaggggtttaaagcc
aacttgtcactcctgaggaggcctggagagaaaacttacacccagcgttgtcggttgttt
gttggtaatctacctgcagacatcacggaggatgaattcaaaagactttttgctaaatat
ggagaaccaggagaagtttttataaacaaaggcaaaggatttggatttattaagcttgaa
tcgagagcgttggcggaaatagctaaagctgaacttgatgatacacccatgagaggtaga
cagcttcgggttcgatttgccacacatgctgctgccctttctgttcgaaatctttcacct
tatgtttccaatgaactgttggaagaagcctttagccagtttggtcctattgaaagggct
gttgtaattgtggatgatcgtggaagatctacagggaaaggcattgttgaatttgcttct
aaaccagcagcaagaaaagcatttgaaagatgcagtgaaggtgttttcttactgacaaca
actcctcgtccagtcattgtggaaccacttgaacagttagatgatgaagatggtcttcct
gaaaaacttgcccagaagaatccaatgtatcaaaaggagagagaaacccctcctcgtttt
gcccagcatgggacatttgagtatgagtattctcagcggtggaagtcccttgatgaaatg
gaaaaacagcagcgggaacaagttgaaaaaaacatgaaagatgcaaaagacaaattggaa
agtgaaatggaagatgcctatcatgagcatcaggcaaatcttttgcgtcaagatctaatg
agacgccaggaagaattaagacgcatggaagaactgcacaatcaagaaatgcagaaacgt
aaagagatgcaattgaggcaagaggaagaacgacgtaggagggaagaagagatgatgatt
cgtcaacgtgagatggaagaacagatgagacgccaaagagaggaaagttatagtcggatg
ggctatatggatccaagagaaagagacatgagaatgggtggtggaggagcaatgaacatg
ggagatccctatggctcaggaggccagaaatttccacctctaggtggtggtggtggcata
ggttatgaagctaatcctggcgttccaccggcaacaatgagtggttccatgatgggaagc
gacatggtaagaatgattgatgttggctga
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