Bubalus bubalis (water buffalo): 102398189
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Entry
102398189 CDS
T05912
Symbol
U2AF2
Name
(RefSeq) splicing factor U2AF 65 kDa subunit isoform X2
KO
K12837
splicing factor U2AF 65 kDa subunit
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102398189 (U2AF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bbub03041
]
102398189 (U2AF2)
Spliceosome [BR:
bbub03041
]
Complex A
U2 snRNP components
U2 related factors
102398189 (U2AF2)
Complex B
102398189 (U2AF2)
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Transformer
Motif
Other DBs
NCBI-GeneID:
102398189
NCBI-ProteinID:
XP_006064102
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All DBs
Position
18:complement(61771748..61785116)
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AA seq
471 aa
AA seq
DB search
MSDFDEFERQLNENKQERDKENRHRKRSHSRSRSRDRKRRSRSRDRRNRDQRSASRDRRR
RSKPLTRGAKEEHGGLIRSPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAGQIPATA
LLPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQ
APGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSE
NPSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSK
GYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLSTINQTPVTLQVPGLM
SSQVQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECGKYGLVKSIEIPRPVDGV
EVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDFW
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacttcgacgagttcgagcggcagctcaacgagaataagcaagagcgcgacaag
gagaatcggcaccgcaagcgcagccacagccgctcccggagccgggaccgcaagcgccgc
agccggagccgcgaccgccgcaaccgggaccagcgcagcgcctctcgggacaggcggcgc
cgcagcaaacctttgaccagaggcgctaaagaggagcacggtggattgattcgctccccc
cgccatgagaagaagaagaaggtccgcaaatactgggacgtgccgccgccgggcttcgag
cacatcacccccatgcagtacaaggccatgcaagctgcgggtcagattccagccaccgcc
ctcctccccaccatgacgcccgacggtctggctgtgacaccgacaccggtgcccgtggtc
gggagccagatgaccagacaggcccggcgcctctacgtgggcaacatccccttcggcatc
actgaggaggccatgatggattttttcaacgctcagatgcgcctgggggggctgacacag
gcccctggcaaccctgtcttggccgtgcagattaaccaggacaagaactttgccttctta
gagttccgctcagtggatgagaccacccaggccatggccttcgacggcatcatcttccag
ggccagtcgctgaagatccgcaggcctcatgactaccagcccctgccgggcatgtcggag
aacccttctgtctacgtgcctggagtcgtgtccaccgtggtcccagactctgcgcacaag
ctgttcatcgggggcttacccaactacctgaacgacgaccaggtcaaagagctgctgacg
tcgtttgggccgctcaaggccttcaacctggtcaaggacagcgccactgggctctccaag
ggctacgccttctgtgagtacgtggacatcaacgtcacagaccaggccatcgcggggctg
aacgggatgcagctgggagataagaagctgctggtccagagggcgagtgtgggcgccaag
aatgccacgctgagcaccatcaaccagacccccgtgaccttgcaagtgcccggcctgatg
agctcgcaggtgcagatgggcgggcacccgacggaggtgctgtgcctgatgaacatggtg
ctgcccgaggagctgctggacgacgaggagtatgaggagattgtggaggatgtgcgtgat
gagtgcggcaagtacgggctcgtcaagtccatcgagatcccgcggcccgtggatggcgtg
gaggtgcctggctgcgggaagatcttcgtggagtttacctctgtgtttgactgccagaaa
gccatgcagggcctgacgggtcgcaagttcgccaacagagtggtcgtcacaaaatactgt
gaccccgactcttaccaccgccgggacttctggtag
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