Bubalus bubalis (water buffalo): 102398304
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Entry
102398304 CDS
T05912
Symbol
LAMA1
Name
(RefSeq) laminin subunit alpha-1
KO
K05637
laminin, alpha 1/2
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04151
PI3K-Akt signaling pathway
bbub04510
Focal adhesion
bbub04512
ECM-receptor interaction
bbub04820
Cytoskeleton in muscle cells
bbub05145
Toxoplasmosis
bbub05146
Amoebiasis
bbub05165
Human papillomavirus infection
bbub05200
Pathways in cancer
bbub05222
Small cell lung cancer
bbub05410
Hypertrophic cardiomyopathy
bbub05412
Arrhythmogenic right ventricular cardiomyopathy
bbub05414
Dilated cardiomyopathy
bbub05416
Viral myocarditis
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
102398304 (LAMA1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102398304 (LAMA1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102398304 (LAMA1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102398304 (LAMA1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
102398304 (LAMA1)
09162 Cancer: specific types
05222 Small cell lung cancer
102398304 (LAMA1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
102398304 (LAMA1)
09174 Infectious disease: parasitic
05146 Amoebiasis
102398304 (LAMA1)
05145 Toxoplasmosis
102398304 (LAMA1)
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
102398304 (LAMA1)
05412 Arrhythmogenic right ventricular cardiomyopathy
102398304 (LAMA1)
05414 Dilated cardiomyopathy
102398304 (LAMA1)
05416 Viral myocarditis
102398304 (LAMA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_EGF
Laminin_G_2
Laminin_B
Laminin_N
Laminin_I
Laminin_II
Laminin_G_3
3keto-disac_hyd
Motif
Other DBs
NCBI-GeneID:
102398304
NCBI-ProteinID:
XP_044790707
LinkDB
All DBs
Position
22:21980364..22105134
Genome browser
AA seq
3080 aa
AA seq
DB search
MRDGGAGLALLASLLWVSAQGQQRGLFPAILNLASNAHISTNATCGEKGPETYCKLVEHV
PGRAMRNAQCRVCDGSSANPKERHPISNAIDGTNNWWQSPSIQNGREYHWVTITLDLRQV
FQVAYVIIKAANAPRPGNWILERSVDGVKFSPWQYYAVSDTECLTHYNITPRRGPPTYRA
DDEVICTSYYSRLVPLEHGEIHTSLINGRPSSDDLSPKLLDFTSARYIRLRLQRIRTLNA
DLMTLSHRDPKDLDPIVTRRYYYSIKDISVGGMCICYGHASSCPWDEGTKKFQCQCEHNT
CGDRCNRCCPGYHQQPWRPGTVSSGNTCEECNCHNKAKDCYYDEDVANQRRSLNIAGQFR
GGGVCIGCLQNTMGVNCETCVDGYYRPHGVSPYEDHSCRPCDCDPLGSLSSVCIKDDLHS
DLHRGKWPGQCPCKEGYAGEKCDRCQFGYKGYPECVSCDCNPAGSVNEEPCSESCLCKEN
VEGSYCDRCKPGFYNLEERNPQGCSECFCFGVSDVCESLSWPVSQVKDMSGWLVTDLVSS
NQIRSQQDALGGRHQISINNSAVEQRLTSQYYWAAPEAYLGNKLTAFGGFLKYTVSYEVP
VEAVDGDPLSHADVIIKGNGITLSTQAEGLLLQPYEEYLNVVKLLPENFRDFKSKKEIDR
DRLMTVLANVTHLLIRANYNSAKTALYRLDSVSLDVASPNVIDLSLATEVEHCECPQGYA
GISCESCLPGYYRVDGILFGGICQPCECHGHAAECDVHGVCFACQHNTTGDHCERCLPGF
FGLPSRGTPGDCQPCACPLSTASNNFSPTCHLDDGDEVACDQCDPGYTGVWCERCADGYY
GNPTVPGDSCVPCNCSGNVDLLEPGSCDSVTGECLRCLGNTDGPHCERCADGFYGDAVTA
KNCRACECHGQGSLSAICHPETGLCECKPHVTGQRCDQCLYGYYGLETGLGCLPCNCSAG
SLSDDCTPEGQCLCVPGVAGEKCDRCARGFYSYQDGGCTPCDCAHTQNTCDPETGECVCP
PHTRGAACEECADGHWGHNLELGCQACNCSSVGSASQQCDVVTGHCWCKPAFGGRTCDQC
SPGYKGFPDCVACDCDPRGTLADTCDQEQGLCSCARETGACSCKENVAGPQCGECRAGTF
ALDEADPRGCTPCFCFGLSHLCSEAEGYVRTPVTLGSDQPLLRVVSQSNLKGTTEGVYFQ
APDVLLDAVTVRQQVHAEPFYWRLPGQFQGDQLLAYGGTLRYSVAFYASDGIGTSNLEPQ
VLIKGGRTRKQVIYVDVPAPENGVRQEQEVGMKESFWKYFNSVSEEPVTRSDFMSVLSNI
EYILIKASYGQGLQQSRISNISMEVGRKVEELHAGREVALLLEKCVCPPGTAGLSCQDCA
PGYHRGKLPEGDGGRPRPLLAPCVPCNCSNHSDACDPETGKCLNCGHNTTGDHCDTCAPG
YYGKVTGSASDCSPCTCPHSLPASYSPTCVLEGDHDFRCDACFVGYEGQYCERCSSGYYG
NPRMPGGTCQRCDCSPHGSVHGDCDRGSGQCICRPGAAGLRCGDCEPRHILVESDCVSCD
DDCVGVLLNDLAHVGDAILSVNLTSTIPLPYGVLSDLENRTKSLWDSLLKENTQKELVKI
QLEGVSEQTEDLQRELDRVLTRSEQVTRATERILDKSVDLIKLTEKLQTDIEEMIKKAMT
INQTLDDDVQLPSSTLQDMQENITALLEVLRKRQFLPLHQNATLELKAAEDLLSQIQENY
EKPQEELAVLKEAVSSLLSTHNSDVWAAEELLKEAETKTQESSRLLLFIGANLREFNEKK
LRIQEEQNLTSALIAEGRGLLDAAAAPANASGEALAQLEQHQDELLLWTAQIRRHVDDLV
MQMSEKRALALVYRAEDHAAELQRLAGVLDSGLGNVRHVSLNATSAAHVHSNIWSLIEES
ERLATDALGTVKEASMASESLVSNGRAALRRSSEFLKEGNRLSRKHRGTTLELSRLKDTA
KRFQEDADKITRQTNESLLILRAIPEGVRDRGAKVTDLAMSANQSATSTLKNVMGLSQKL
LNTSTDLSRVNATLQETDELLRDSSMTTLLAGRKVKDVETQANLLLDRLKPLKMLEENLS
RNLSEIKLLISQARKQAASIKVAVSADRDCIRAYQPQISSTNYNSLTVNVKTSEPDNLLF
YLGSSTSADFLAVEMRRGKVAFLWDLGSGSTRLEFPDFPIDDNKWHSIYVTRFGNIGSLS
VKEMSAAQKPPPRTSKSPGTAKVLDVNNSTMMFVGGLGGQIKKSPAVKVTHFKGCMGEAF
LNGQSIGLWNYIEREGECHGCFGSPQDEDASFHFAGSGYSVVEKTLRATVTQIIMLFSTY
SPNGLLLYLASNGTKDFLSIDLVDGRVRVTVDLGSGPLALITDRRYNNGTWYKIVFQRNK
KQGLLAVIDAYNTTYKETKQGETPGASSDLNRLDKDPIYVGGLPRSRVVRKGVSSKSYVG
CIKNLEISRSTFDLLRNSYGVRKGCILEPVRSVSFLRGGYVELPPKSLSPDTELLATFAT
RNSSGIILAALSQSSEKPGDRQAHRPFWSIMLIKGHVEVHVNPGDGTSLRRALLQAPTGT
YGDGQEHSISMIRSGRVVTVQVDETTPVEMKLGLSAESRTINVSSLYVGGIPEGEGTPML
KMRSSFHGCIRNLVFNMELLDFTSATDYEHADLDSCSLSERPKLAVYREDGELPPEPQPL
PSAELCATERAPEYIPSAHQFGLAEGSHLVLPFNQLAVRKRLSVQLSIRTFASSGLVYYM
AHQNQVDYAALQLHSGRLHFTFDLGKGRTKVSHPALLSDGQWHTVKTEYFKRRGFMTVDG
QESPMVTTVGDATTLDVEGKLYLGGLPSEYRARNIGNITHSIPACLGQVTVNSQQLHADS
PVSTLAVTRCYAVAQEGTFFEGSGYAAFVREGYKVRSDVNITLEFRTSSENGVLLGISSA
KVDAIGLEIVDGKLLFHVNNGAGRITATYEPKAPSRLCDGRWHTLQANKSKHRVVLTVDG
NVVRAESLHAQSTSADTNDPIYVGGYPADVKQNCLSSRTSFRGCVRRLTLTKGPQVQSFD
FSTAFDLQGVFPHSCPGTES
NT seq
9243 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgacggcggcgcggggctggcgctcctggcctcgctgctctgggtctccgcgcag
ggccagcagagaggcctgttccctgccatcctcaaccttgccagcaatgcacacatcagc
accaatgcgacctgcggggagaaggggccagagacgtactgcaagctggtggagcatgtg
cctgggcgggccatgcgcaatgcccagtgccgggtctgtgatggcagcagcgccaacccc
aaagaacggcatccgatatccaacgccatcgacggtaccaataactggtggcagagtcct
agtatccagaacgggagagagtaccactgggtcacgatcacgctggacctgaggcaggtc
ttccaggtcgcttatgtcatcatcaaggcagctaatgcccctcgacctggaaactggatc
ttggaacgttctgtggatggtgtcaagttcagcccctggcagtactatgcggtcagtgac
acggaatgtttgacgcattacaacatcactccgagacgggggccgcccacctacagggcg
gatgacgaagtcatctgcacctcctattactctagactggtgccgcttgagcacggagag
attcacacatcgttaatcaatggcagaccaagctctgacgatctttcacccaagttgctg
gatttcacttctgcacgatacatccgcctgcgtttacagcgcatccgaactctcaacgcc
gatcttatgaccctcagccaccgggaccctaaagacctggaccctattgtcaccagacga
tattattattcaataaaagacatttctgttggaggaatgtgtatctgttatggccatgct
agtagctgcccatgggatgaaggtacaaagaaattccagtgtcagtgtgaacataacacg
tgtggggacagatgcaatcgatgctgccctgggtaccaccagcagccttggagacctggc
actgtttcttccgggaacacgtgtgaagaatgcaattgccacaataaagccaaagactgt
tactatgatgaagatgtggccaatcagaggagaagcctgaatattgctggacagttcaga
ggaggaggggtttgcattggctgcctgcagaacaccatgggtgttaactgtgaaacctgt
gtggatggatattacagaccccacggggtgtctccttatgaggaccactcttgtcgcccc
tgtgactgtgaccctctggggtccctcagttctgtctgtattaaggatgaccttcactct
gacttacacagagggaagtggccaggtcagtgtccatgcaaggaaggttatgcgggagag
aaatgtgatcgctgccaattcggctataagggttacccggagtgtgtgtcctgtgactgc
aacccagctggcagcgtgaatgaggaaccctgctctgagtcttgtctctgtaaggaaaat
gttgaggggagttactgtgatcgctgcaagccaggattctataacttggaggaaaggaat
ccccagggctgctccgagtgcttctgcttcggcgtctccgacgtttgtgaaagcctctcc
tggcccgtcagccaggtgaaagatatgtctgggtggctggtcactgacttggtcagttcc
aaccagatccggtcccagcaggatgcgctgggtggacgtcaccagatcagtatcaacaac
tcggcggtggagcagcggctgacctcccagtactactgggcggccccggaggcctacctg
ggaaacaagctgacggcctttggtggattcctgaagtacacagtgtcctacgaggtccca
gtggaagcagtggacggtgaccctctgtctcacgccgacgtcatcattaagggaaatgga
atcactttaagcacccaggctgagggcctgctgttgcagccatacgaagagtacttgaac
gtggttaaactgctgccagagaacttccgagatttcaagagcaagaaagagatagatcgc
gaccggctgatgaccgtcctcgccaatgtgacccatctcttgatcagagccaactacaac
tctgccaagacagctctttacaggttggattctgtctctctggacgtggccagccctaac
gtcatagacctgtccctggccacggaggtggagcactgcgagtgtcctcagggctatgcg
ggcatctcctgcgagtcctgtcttcccggctattaccgcgtggacggaatacttttcgga
ggaatctgtcagccctgtgaatgccacggccatgcagctgagtgtgatgttcatggtgtt
tgctttgcatgccagcacaacaccactggggaccactgtgagcgctgcctgcccggcttc
ttcgggctgccttcccgagggacccccggggactgccagccctgcgcttgcccactctcc
acggcctccaacaatttcagccccacctgccacctggatgatggggacgaagtggcgtgt
gaccagtgtgacccaggatacacgggggtttggtgcgagagatgtgcagacggttactat
ggaaacccaacagtgcccggagactcctgcgtcccatgtaactgcagtggcaacgttgac
ctcttggagcctgggagctgtgattccgtcactggagaatgcctgcgatgccttgggaac
accgacggcccccactgtgagaggtgtgctgacggtttctacggggacgcagtgaccgcg
aagaactgccgtgcctgtgaatgtcatggccaaggctccctttctgccatctgccacccg
gaaactggactctgtgagtgcaaaccacacgtgaccggacagcggtgtgaccagtgcttg
tacggctactatgggctagagacggggctcgggtgcctgccctgtaactgcagtgccgga
tccctgtcggatgactgcacaccggaaggccaatgtctctgcgtcccgggtgtggccggg
gagaagtgcgacaggtgtgcccgtggcttctattcctaccaggacggcggctgtacaccc
tgcgactgcgctcacacccagaacacctgtgacccggagaccggggagtgtgtgtgcccg
cctcacactcggggtgcagcgtgcgaggagtgtgcagacggacactggggccacaaccta
gagctcggatgccaggcctgtaattgcagtagtgtggggtcggccagccagcagtgtgat
gtagtcactggccactgctggtgtaagcctgcattcggcggacggacctgcgaccagtgc
tccccagggtacaaaggcttccccgactgcgtggcctgtgactgtgaccccagggggacc
ctggccgacacctgcgaccaggagcagggtctctgcagctgtgcccgggaaaccggagcc
tgctcttgcaaggaaaacgtcgctgggcctcagtgcggtgagtgccgagctggcaccttt
gctctggacgaggcggaccctcggggatgcacgccctgcttctgcttcgggctgtcacac
ctgtgctcagaggccgagggctacgtgaggacgccggtgacgttgggctcagatcagcct
ctgctgcgtgtggtttctcagagtaacctcaagggcacaaccgagggggtgtacttccag
gcccccgatgtcctgctggacgccgtaaccgtcaggcagcaggtccacgcagagccattt
tactggcggctgcccgggcagtttcagggagaccagctcctggcctacggcggcacactg
cgctacagcgtggccttctatgcttccgatgggatcggcacctccaacctggaacctcag
gtgctcatcaaaggaggccggaccaggaagcaggtcatctacgtggacgtgccagccccc
gagaacggagtgagacaggagcaggaagtggggatgaaagagagtttttggaaatatttt
aactctgtttctgaagaacctgtcacacgttcagattttatgtctgttcttagcaacatt
gagtacattcttatcaaagcctcttatggccaaggattacagcaaagcaggatctcaaat
atttcaatggaggtcggcagaaaggtggaagagttacacgcaggcagggaggtggccctc
ctgttagagaagtgcgtctgtcctcctggcacggctggactctcgtgtcaggactgcgct
cctggttaccacagagggaagcttccggaaggtgatggcgggagaccacgccctctgctg
gccccgtgtgtgccctgcaattgcagtaaccacagtgacgcctgcgacccggaaaccggg
aagtgtctgaactgtggccacaacaccactggcgaccactgtgacacgtgtgcccctggg
tactatgggaaggtgaccggctcggccagtgactgctctccgtgcacctgtcctcacagc
ctgcctgccagctacagtcccacttgcgtcttggaaggcgatcatgatttccgctgcgat
gcctgttttgtgggttatgaaggacagtattgtgaaaggtgctcatccggttactatggg
aaccctcggatgccaggcggcacctgccagaggtgtgactgcagcccgcacggctctgtc
cacggcgactgtgaccgtgggtccgggcagtgcatctgccggccgggggccgcggggctc
cgctgcggggactgtgaaccgaggcacattttggtggaaagcgactgtgtgtcctgtgat
gatgactgtgtgggtgtcctgctgaatgacttggcccacgttggggatgccatcctgtct
gtgaacctcaccagcaccatccctctcccatatggggttttgtcagacctggaaaataga
acaaagtctctctgggactctttattaaaagaaaatacgcaaaaagaactggtgaaaatt
caacttgaaggcgtctcagaacaaacggaggacctgcaaagagaacttgacagagtgttg
acacgtagtgagcaggtgaccagggccactgaaagaatcctggacaagagtgtggacctt
attaagttgaccgagaagctgcagacagacatcgaagaaatgatcaaaaaggctatgact
ataaatcagacgctggatgatgatgtccagctgcccagctctactcttcaggacatgcag
gagaacatcacggctttgttggaagtcctacggaaaaggcagttcctgccgctgcaccaa
aatgccaccctggaactcaaggctgccgaagatttattgtcacaaattcaggaaaattac
gagaagccacaggaagagttggcggtgttaaaagaagcagtaagcagcctcctctcaaca
cacaacagtgacgtgtgggctgcagaagagctcctgaaagaagcagagacgaagacccag
gagagcagtcgcctgctgctcttcatcggggccaacctgcgagagttcaacgagaagaag
ctgcgtattcaggaagaacagaacttgacgtcagcgctgatcgccgaaggaagaggactg
ctggatgcggccgctgctcctgcaaacgcatcgggggaggctctcgcgcaactagagcaa
caccaggacgagctgctactgtggactgcccaaatcaggcgccacgtggatgacctggtc
atgcagatgtctgaaaagagagcgctggcgcttgtgtacagggcggaggatcacgccgct
gagctgcagagactggcaggtgttctggacagtggccttgggaatgtcagacatgtgtcc
ctgaatgccaccagcgcagcccacgtccactccaacatctggagcctgattgaggaatcg
gagaggttggcgacagacgcactcggaactgtgaaagaggcgagcatggcttccgaatct
cttgtttctaatgggagagcagccctccggcgcagttccgagtttctcaaagaaggcaac
cgcctgagcagaaagcatcgaggtaccacattggaactgagtagattgaaagatactgca
aagagatttcaagaggatgctgataaaattaccaggcagaccaatgaatcactcttgata
cttagagcaattcctgaaggtgtcagagacaggggagccaaagtcacagacctggccatg
tctgcaaaccagagcgccaccagcacactcaagaatgtcatggggctgagccagaagctg
ttgaacacatccactgacctgtccagggttaacgccacgttacaggaaacagacgaactc
ctacgagactcctcgatgaccactttgttagctggaagaaaagtcaaagatgtggaaaca
caggccaacctcttgttggatcggttgaagcctctgaagatgttagaagagaacctgagc
agaaacctgtcagaaatcaaactgctgatcagccaggcccggaaacaagccgcatctatc
aaagttgctgtgtctgcagaccgagactgcatccgggcctaccagccccagatttcttct
accaactacaacagcctgacggtcaacgtgaagacaagtgaacccgacaaccttctcttc
tacctgggcagcagcactagcgctgatttcctggcagtggagatgcggcgaggaaaagtg
gccttcctctgggatttgggctctggatccacacgcttggaatttccagacttcccaatt
gatgacaacaagtggcacagcatctatgtgaccaggtttgggaacattggttcattgagc
gtaaaggaaatgagtgcagctcaaaagcctccaccaagaacaagtaaatcccctggaaca
gccaaagttctggatgtaaacaactcaaccatgatgtttgttggagggcttggcggacag
atcaagaagtctcctgccgtgaaggttactcattttaaaggctgcatgggtgaggccttc
ctgaatggacagtcgatcggcctgtggaactatattgagagggagggggagtgccacggc
tgcttcggaagcccccaggatgaagatgcctctttccattttgctgggagtgggtattct
gtcgtggagaagactctccgggctactgtgactcagataattatgctttttagtacctat
tcacctaacgggctgcttctgtacctggcttcaaatggcaccaaagactttttatccatt
gacctggtcgatggcagagtcagggtgacagttgacctgggttctgggccccttgctctg
attaccgaccgacgctataataatggaacgtggtacaaaattgtcttccagcgaaataaa
aagcaagggctcctagcagttattgatgcttataacaccacctacaaagaaaccaagcaa
ggagagactccaggggcatcttctgacctcaatcgtctggataaggatccaatttatgtg
ggtggattaccaaggtcgagggtggtgaggaaaggtgtctccagcaaaagctacgtgggc
tgcatcaaaaacctggaaatatccagatcgacctttgatttactcagaaattcctatggc
gtgaggaaaggctgtatactggagcctgtccgaagcgtcagcttcttgagaggtggctat
gttgaattgccccccaagtctctgtcaccagacacggagttgttggcaacatttgccacc
aggaacagcagtggcatcatcctggctgccctgagccagagcagtgagaagccaggtgat
cggcaggcccataggcccttctggtctatcatgctaatcaaaggccatgttgaagtgcat
gttaaccctggggatggaaccagcctgagaagagctctcctgcaggctcccacgggcacc
tacggtgacggtcaagagcattccatctccatgataaggagcggaagagttgttactgtt
caagtggatgagacaactcctgtggaaatgaagttgggcctgtcagcagaaagcaggact
ataaatgtgtccagcctgtatgttgggggcattccagagggtgaggggacacccatgctc
aagatgagaagctcgttccacggctgtatccgaaacctggtctttaacatggaacttctg
gatttcacgagtgccactgactatgaacatgcagacctggactcctgctcactctcagag
aggccgaagctagctgtctaccgagaggacggagaactcccgccagagccccagccttta
ccaagtgcagaactgtgcgccacggaaagggccccagaatacatccccagtgcccaccag
tttggccttgcagaaggcagccacttggtgctgccctttaaccagctggctgtccgaaag
aggctctcagttcagctgagcatccgcacattcgcctccagtggcctggtgtactacatg
gctcaccagaaccaggtggactacgccgcgctccagctgcactcgggccgcctccacttc
accttcgaccttgggaagggcaggaccaaggtctcacaccctgcgctgctcagcgacggc
cagtggcacacggtcaagacagagtactttaaaaggaggggcttcatgacggtcgacggc
caggaatcgcccatggtgaccacggtgggagatgccaccacgctagacgtggaaggaaag
ctgtacctcggaggcctcccctccgagtacagggccaggaacattggaaacatcacccac
agcatccctgcctgcctcgggcaggtgacagtgaacagccagcagctgcacgcggacagc
cccgtgtctacgttggcagtgaccaggtgctatgccgtggcccaggaaggaactttcttt
gaaggcagtggatacgcagccttcgtcagagaaggctacaaagtgcgatccgacgtgaac
atcacgctggagttccgtacctcatcggagaacggtgtcctcctggggatcagcagcgcc
aaagtggatgccattggactggagattgtagatggaaagctcttgtttcacgttaacaac
ggtgctgggaggataacagccacatacgagcccaaagctcccagtaggctctgtgatggg
agatggcacacccttcaggcaaacaagagcaagcatcgcgtggttttgactgtcgacggg
aacgtggttcgagcggaaagtctgcacgcccagtccacctccgctgataccaacgatccc
atttatgtcggcggctatcctgctgatgtgaagcagaactgcctgagcagccggacctcc
ttccggggctgtgtgcggaggctcactctgactaagggccctcaagtgcagtccttcgac
ttcagcacagctttcgacctgcaaggagttttccctcattcctgccctgggactgagtcc
tga
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integrated database retrieval system