Bubalus bubalis (water buffalo): 102398429
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Entry
102398429 CDS
T05912
Symbol
LRRC4C
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04360
Axon guidance
bbub04514
Cell adhesion molecule (CAM) interaction
bbub04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
102398429 (LRRC4C)
04517 IgSF CAM signaling
102398429 (LRRC4C)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
102398429 (LRRC4C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bbub04515
]
102398429 (LRRC4C)
Cell adhesion molecules [BR:
bbub04515
]
Immunoglobulin superfamily
NGL family
102398429 (LRRC4C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
LRR_1
V-set
LRR_14
LRR_9
Ig_2
VEGFR1-3_N_Ig-like
Ig_6
Sp38
Ig_VEGFR-1-like_5th
DUF6715
Herpes_gE_N
Syndecan
Motif
Other DBs
NCBI-GeneID:
102398429
NCBI-ProteinID:
XP_025121475
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All DBs
Position
16:14251229..14447115
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AA seq
640 aa
AA seq
DB search
MLNKMTLHPQQIMIGPRFNRALFDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
ICVRKNLRDVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAF
NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLG
ELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQ
GLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHH
NPWNCNCDILWLSWWIKDMAPSNTACCARCNTPPNLKGRYIGELDQNYFTCYAPVIVEPP
ADLNVTEGMAAELKCRASTSLTSVSWITPNGTVMTHGAYKVRIAVLSDGTLNFTNVTVQD
TGMYTCMVSNSVGNTTASATLNVTAATTTPFSYFSTVTVETMEPSQDEARTTDNNVGPTP
VIDWETTNVTTSLTPQSTRSTEKTFTIPVTDINSGIPGIDEVMKTTKIIIGCFVAITLMA
AVMLVIFYKMRKQHHRQNHHAPTRTVEIINVDDEITGDTPMESHLPMPAIEHEHLNHYNS
YKSPFNHTTTVNTINSIHSSVHEPLLIRMNSKDNVQETQI
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagatgaccttacatccacagcagataatgataggtcctaggtttaacagg
gccttatttgaccccctgcttgtggtgctgctggctcttcaacttcttgtggtggctggt
ctggtgcgggctcaaacctgcccttccgtctgctcctgcagcaaccagttcagcaaggtg
atttgcgttcggaaaaacctacgtgatgttccagatggcatctccaccaatacccggctg
ctgaacctccatgagaaccaaatccagatcatcaaagtgaatagcttcaaacacttgagg
cacctggaaatcctacagttgagtaggaatcatatcagaacaattgaaatcggggccttc
aatggtctggcaaacctcaacacgctggaactctttgacaatcgtcttacgaccatcccg
aatggagcttttgtatatttgtctaaactgaaggagctctggttgcgaaacaaccccatc
gaaagcatcccttcttatgcttttaacagaatcccttctttgcgccggctagacttaggg
gaattgaaaaggctttcatacatctcagaaggtgcctttgaaggtctgtctaacttgagg
tatttgaaccttgccatgtgcaatctccgagaaatccctaacctcacgccgctcataaaa
ctagatgagctggatctttctgggaatcatctatctgccatcaggcctggctctttccag
gggttgatgcaccttcagaaactgtggatgatacagtcccagattcaagtgattgaacgg
aatgcctttgataaccttcagtcactggtggagatcaacctggcacacaacaatctgaca
ttactgcctcatgacctcttcacacccttgcatcatctagagcggatacacttacatcac
aacccctggaactgtaactgtgacatcctgtggctcagctggtggataaaagacatggcc
ccctccaatacagcttgctgtgcccggtgtaacacccctcccaatctgaaagggaggtac
attggggagcttgaccagaattatttcacatgctatgctcctgtcattgtggagccccca
gcagacctcaatgtcactgaaggcatggcagctgagctgaaatgtcgggcctccacgtcc
ctaacctccgtatcttggattactccaaacggaacagtcatgacacatggggcatataaa
gtgcggatagctgtgctcagtgatggcacgttaaacttcacgaatgtaaccgtgcaagat
acaggcatgtacacatgtatggtgagtaattctgtgggaaataccaccgcttcagccacc
ctgaatgttaccgcagcaaccactactcccttctcttacttttcaactgtcacggtagag
actatggaaccttctcaggatgaggcacggaccacagataacaatgtgggtcccactccg
gtgatcgactgggagaccactaacgtgaccacctccctcacgccacagagcacaaggtca
acagaaaagacattcaccatccctgtgactgatataaacagtgggatcccaggaattgat
gaggtcatgaagactaccaaaatcatcattggctgttttgtggccatcacactcatggct
gcagtgatgctggtcattttctacaagatgaggaagcagcatcatcggcaaaaccatcat
gccccaacgaggactgttgaaattattaatgtggatgatgagattacaggagacacgccc
atggaaagccacctgcccatgcctgcgattgagcatgagcacctcaatcactataactct
tacaaatctcctttcaaccacacaacaacagttaacacaataaattcaatacacagttca
gtgcatgaaccgttattgatccggatgaactctaaagacaatgtccaggagactcaaatc
taa
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