Bubalus bubalis (water buffalo): 102398590
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Entry
102398590 CDS
T05912
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03020
RNA polymerase
bbub03420
Nucleotide excision repair
bbub05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
102398590 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
102398590 (POLR2B)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
102398590 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbub03021
]
102398590 (POLR2B)
03400 DNA repair and recombination proteins [BR:
bbub03400
]
102398590 (POLR2B)
Enzymes [BR:
bbub01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
102398590 (POLR2B)
Transcription machinery [BR:
bbub03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
102398590 (POLR2B)
DNA repair and recombination proteins [BR:
bbub03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
102398590 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
102398590
NCBI-ProteinID:
XP_006058428
LinkDB
All DBs
Position
7:complement(44969475..45015589)
Genome browser
AA seq
1174 aa
AA seq
DB search
MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHASGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIKEGEEQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKEVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEVFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELEGTNRRYTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGY
HLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacgcggacgaggatatgcaatatgatgaagatgatgatgaaatcaccccagat
ttatggcaagaggcttgctggattgtaattagttcctattttgatgagaaaggtttggtg
agacaacagctggattcttttgatgagtttattcagatgtctgttcaaagaattgtggaa
gatgctccacctatagacctacaagctgaagctcagcatgctagtggagaagttgaagaa
ccgccaagatatttgctgaagtttgaacagatttacctgtccaagcccacccattgggaa
agagatggtgctccatcaccaatgatgccaaatgaggccagattaagaaatctcacgtac
tctgctccactttatgttgacataacaaaaacagtcattaaagaaggtgaagaacaactt
cagacacagcatcagaaaacttttataggaaaaattccaattatgttgcgttcaacttac
tgcctattgaatggcttaactgatcgtgatctttgtgagttaaatgaatgccccttggat
cctggtggctacttcattattaatggatcagaaaaggttctgattgctcaagagaaaatg
gcaacaaacacagtctatgtgtttgccaaaaaggattccaaatatgcctacacaggagag
tgtagatcatgtctggagaattcttctcgacccaccagcactatctgggttagcatgctg
gcgagaggaggacagggtgcaaaaaagagtgctattggtcaacgtattgtggcaacccta
ccgtatatcaagcaagaagttcccatcattattgtgtttagagcgttaggttttgtgtct
gacagagatattttagagcatattatttatgattttgaagatccagagatgatggaaatg
gttaaaccatcactcgatgaagcttttgtcatccaagaacagaatgttgcactaaatttc
attggttcaagaggggcaaagcctggtgttaccaaagagaaaagaattaaatatgccaag
gaagtattacagaaagaaatgctccctcatgttggcgtcagtgatttttgtgagaccaag
aaagcttatttcttggggtacatggttcataggttgctgctagcagctttgggtagaaga
gaattagatgacagagatcactatggaaacaaaagattggaccttgctggaccactactt
gcattcttatttagaggaatgtttaagaatttgcttaaagaagtacggatctatgcccag
aagttcattgatcgtggaaaggattttaacttggaattggcaattaaaacaaggattata
tctgatggcctaaaatactctttagctactggaaactggggtgaccaaaagaaagctcat
caagccagagctggagtatctcaggtattaaatcgcctgacttttgcatctactctttct
cacctgcgtcgtttaaattctcccattggtagagatggcaaactagcaaaacctagacaa
ttgcataatacattatggggaatggtgtgtcctgctgagaccccagagggccatgctgta
ggacttgtgaagaatttagccctgatggcttatatttcagttggatctcaaccttctcca
attctggaatttttagaagaatggagtatggaaaatttagaagaaatttctcctgcagct
attgctgatgcaaccaagatttttgttaatggctgttgggttggaatacataaagatcct
gaacaacttatgaacacgctacggaagctgcggcgtcagatggacatcattgtgtctgaa
gtttctatgatcagagatattcgagagcgggagattcggatctatacagatgcaggccgt
atttgtagaccacttctaattgtggaaaaacaaaagctgcttttgaagaagagacacatt
gatcaattgaaagagagagaatataacaattacagttggcaggatcttgtggccagtggg
gtggtagaatatattgatactcttgaagaagaaacagtgatgcttgcaatgaccccagat
gatttacaggagaaagaagtagcttattgttccacatatacacactgtgaaattcatcca
tcaatgattcttggtgtctgtgcctctattattccttttcctgatcataaccagtcccct
agaaacacataccagtctgctatgggtaagcaggctatgggggtttatatcaccaatttt
catgttcgtatggatacgttggcccatgttctgtattatcctcaaaaaccacttgtgact
acacggtctatggagtatctgcgatttagagagctgccagcaggtatcaactcaattgta
gccattgcatcatacactggatataatcaagaagactctgttatcatgaatcgttcagct
gtagaccgcggctttttcaggtctgttttctatcgatcatacaaggaacaggaatctaaa
aaagggtttgatcaagaagaagtttttgagaagcctacacgtgaaacttgccagggtatg
agacatgctatttatgacaagctggatgatgatggtttgatagctcctggagttcgtgta
tcaggagatgatgttattataggcaaaacagtcaccttgcctgaaaatgaagatgaattg
gagggcactaatagacggtatacaaagagagactgtagcacttttctcaggactagtgag
acgggcattgtggatcaggttatggtaactctcaaccaagaaggatataaattttgtaaa
ataagggtacgctctgttagaattccacagattggagacaaatttgctagtcgacatggt
caaaagggtacttgtggtattcagtatagacaggaggatatgcctttcacctgtgaaggt
atcacccccgatatcatcataaatccccatgccatcccctctcgtatgaccattggtcac
ttgattgaatgtcttcaagggaaggtatcagctaacaagggtgaaattggtgatgccact
ccattcaatgatgctgttaatgtgcagaagatatctaatcttttatctgattatggctac
catctcagaggaaatgaggtcttatacaatggattcactggtcgaaaaatcacatcacag
atttttattggccctacttactaccagcgtttgaagcatatggtggatgataagattcat
tctcgtgctcggggacctattcagattctaaatagacagccgatggagggtagatctcgt
gacggtggcttgcgttttggagagatggaacgagactgtcagatcgcgcatggagcagcc
cagttcctaagggagaggttgtttgaggcgtcagatccgtatcaggttcacgtttgcaat
ctttgtggaataatggcgattgcgaacaccaggacccatacatacgaatgcaggggctgc
cgaaataaaacccagatctctttggttcgaatgccttatgcgtgcaaactgttgtttcag
gaactcatgtccatgagtattgcacctcgaatgatgagtgtttag
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integrated database retrieval system
