Bubalus bubalis (water buffalo): 102398721 Help Entry 102398721         CDS       T05912                                  Symbol SYNPO Name (RefSeq) synaptopodin isoform X1   KO K21112   synaptopodin Organism bbub  Bubalus bubalis (water buffalo) Pathway bbub04530   Tight junction Brite KEGG Orthology (KO) [BR:bbub00001]  09140 Cellular Processes   09144 Cellular community - eukaryotes    04530 Tight junction     102398721 (SYNPO) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Calsarcin Motif Other DBs NCBI-GeneID:  102398721 NCBI-ProteinID:  XP_025148186 LinkDB All DBs Position 9:complement(49190347..49247499) Genome browser AA seq 1125 aa AA seqDB search MLGPHLPPLPPAPSEGGSTPCAFGIPDGSYRCLALEAEESGGEEGLQGEAGLTDLEEDQV ASRSGDKACRATQGPPQLPRALGTRPPSCSREARGVSQLDNRASQAGDPVKVRQVMTASL SPSPGPRLAQKPALGRSTSLTEKDLKEAKARSQQIAAQLTTPPSSNSRGVQLFNRRRQRV NEFTLESHGQRGPKSSQEPLRVPPTSPTGHAPGLSLSPTSLPEPGPPRNPACQSADTGVP SHSMEGCSEEASLLRHLEKMASEEEEVPLVVYLKENAALLTANGLHLSQNREAQQSPPTP PPEEVHSPAADANQNLPSTGTTLVTPASNGNHNLPATDVNQNLSAAVTPQSLPLSSVQQN SSEVQLPPNDVAPDFKPSTPCAGGQPQEPAVEVRSSTLLIDKVSAPPTATSTFSREVTPI SSSRPLGPDFMSSSLLIDVQLGAPVVSTEQEMSGRTTATTPTKLYSEVHLTLAKPPSVVN RTARPFGIQAPGSTGQMERSPMVERRHRGEKTPIPQPPSVADRSPRPQRHVISHSPMLER RPVAQRSPALERRPLGNFTPPPTYAETLSTAPLTSGVRSPPSYSALYPSSDSRPSHLKGQ AVPASKTGILEESMARRGSRKSMFTFVEKPKVTPNPDLLDLVQTADEKRRQRDQGEAGLE EEPFALGAEASNFQQEPAPRDRASPADAEETVPEWASCLKSPRIQAKPKPKPNQNLSEAS GKGAELYARRQSRMEKYVIESSGHAELARCPSPTMSLPSSWKYSTNAPGGTFRVASRSPA RTPPASLFHGYLPENGVLRPEPTKQPPYQLRPSLFVLSPIKEPAKASPRAPSPAKPSSLD LVPSLPKAALPPSPALPRPSRSYATTGQDGLQPTAVSPTYSSDISPVSPSRAWSPRAKQA PRPSFSTRNAGIEAQDRRESLPTSPPWTPGASRPPSSLDGWVSPGPWEPGRGSSMSSPPP LPPPPPMSPSWSERSVSPLRSETEVRPPSRQLQALLARNIINAARRKSASPRPAGAESLR PFSPPRAPPPPPPPPPRMRSPQPSRPGPAAAPGATFAPIPRSPLPAPPRPFPYRRSPTDS DVSLDSEDSGAKSPGILGYNICPRGWNGSLRLKRGNLPTEASCTT NT seq 3378 nt NT seq  +upstreamnt  +downstreamnt atgctgggcccccacctcccacccctacccccggcacccagcgaaggtggatctaccccc tgcgcctttgggatccctgatggcagctacaggtgtctggccttggaggccgaggagagc ggcggtgaggagggcctgcagggagaggcagggctcacagacttggaggaagaccaagtg gccagcaggagtggggacaaggcctgcagagccacccaagggccaccacagcttcccaga gccctgggcacccggccacccagctgctccagggaggcacgaggggtttcccagcttgac aacagagccagtcaggccggggaccccgtgaaggtccggcaggtgatgacagccagcctc agccccagcccagggcccaggcttgcccagaaaccagcactgggccggagtactagcctc accgagaaggatctaaaagaggccaaggcgaggagccagcagatcgctgcccagctgacc acccctcccagctccaactcccgtggagtccagctcttcaataggcgccggcagagggtg aacgagttcaccttggagagccacggccagaggggaccgaagtctagccaggagcccctc agagtgccccccaccagccccacaggccatgccccagggctcagcctgagtcccacctcg ctccctgagccaggccctccgagaaaccccgcctgccagagcgctgacacaggggtcccc agtcacagcatggagggctgctcggaggaagccagcctgctccggcacctggagaagatg gccagtgaggaggaggaggtaccactggtggtttatctaaaggagaatgcagccctgctg acggccaacgggctccacctgtcccagaacagagaagcccagcagagtcccccaacccca cctccggaggaggtccacagcccggctgcagatgccaaccaaaaccttccctcaaccggc accacacttgtcacgccagcttctaatggcaaccacaacctgccagccacagatgtcaat cagaacctatcggcagccgtcaccccacagagcctgccgctctccagcgtccaacagaat tcttccgaggtgcagctccctccgaatgacgtggcgccagatttcaaacccagcaccccg tgtgctggcgggcaaccccaggagccagccgtagaggtgagatccagcacgctcctaatt gataaggtatcagctccacctaccgccaccagcaccttctctagagaagttactcccatc tccagctccaggcccctgggcccagatttcatgtccagctccctgctcattgatgtccag cttggagccccagtggtgtccacagagcaagagatgtccgggcggacaaccgccaccacg cccaccaaactgtacagcgaggtccacctcacgctggccaagcctccatccgtggtcaat aggacggccaggccctttgggatccaggcgccgggcagcaccggtcagatggagcgaagc cctatggtagagagacgacatcgtggggagaagacccccatcccccagccccccagtgtg gcagacaggagcccccggccacagagacacgtaatatcccatagccccatgctggagagg aggcccgtggcacagcgaagccccgccttggagagacgccccctgggaaacttcacccca ccacccacctatgctgagaccttgtccacagcccctctgacttccggggttaggtctccc ccatcttattctgccctgtaccccagctccgactccaggccttctcatctaaagggccag gcagtccctgccagcaagacgggcattttggaggagtcgatggcccgcaggggcagccgg aaatccatgttcaccttcgtggagaagcccaaggtgaccccgaatccagacctgctggac ctggtacagacggctgatgagaagcgcaggcagagggaccagggggaggcgggcctggag gaggagcccttcgcccttggggccgaggcctccaacttccagcaggagccggcaccccgg gacagggctagccctgctgacgccgaggagaccgtccccgagtgggcctcctgcctcaag tcaccgcgcatccaggccaagccgaagcccaaacccaaccagaacctctcggaggcctcg gggaagggggctgagctctacgcccgccgccagtcccggatggagaagtacgtcatcgag tcttcaggccacgctgagctggcccgctgcccgtcacccaccatgtccctgccttcatcc tggaagtactccaccaacgcacctggcggcaccttccgagtagcctcccggagcccggct cggaccccacctgcctcgctcttccacggatacctgcccgagaatggggtcctgcgtcca gagcccaccaagcagccgccctaccaactgcggccctccctcttcgtcctctcacccatc aaagaacctgccaaggcttcgcctagagccccctcgcctgccaagcccagctccctggac ctggtgcccagcctgcccaaggcggctcttccaccgtcacctgccctgcctcggccctcc cgctcctacgccaccactggccaggacggcctccagcccaccgcagtgagccccacctac agcagtgatatctcgcccgtgtcaccctccagggcatggtctccccgagccaagcaagcc cccaggccctccttctccacccggaatgcggggatcgaggctcaggaccgccgggagagc ttgcccacctctccgccctggacgcccggcgcatcccggccccccagtagtctggatggc tgggtgagcccggggccctgggagccgggccgtgggagcagcatgagcagccccccaccg ctgccaccgccgccgcccatgtccccctcgtggagcgagcgctcggtatccccgctgcga tccgagacggaagtgcggccccccagccgccagctgcaggcgcttctggctcgaaacatc atcaacgcggcccggcgcaagagcgcctccccgcggccagcgggcgccgagagcctccgg cccttctccccaccgagggcgccgccgccaccgccaccgccgccgccgcgcatgcgctcg ccgcagccttcccgtcccggtccagccgcggcccccggggccacattcgctcccatcccc cggagcccgttgcctgcaccgcctaggcccttcccctaccgccgctcgcccacagactcc gatgtgtccctcgactccgaggactccggggctaaatcacccggcatcctcggctacaac atctgtccccgcgggtggaacggcagcctgaggctcaagcgtggcaacctccccaccgag gcctcctgcaccacctaa

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