KEGG   Bubalus bubalis (water buffalo): 102398877
Entry
102398877         CDS       T05912                                 
Symbol
NEDD1
Name
(RefSeq) protein NEDD1 isoform X2
  KO
K16547  protein NEDD1
Organism
bbub  Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:bbub00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:bbub03036]
    102398877 (NEDD1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:bbub04812]
    102398877 (NEDD1)
Chromosome and associated proteins [BR:bbub03036]
 Eukaryotic type
  Centrosome formation proteins
   Pericentriolar materials (PCM)
    Other PCM proteins
     102398877 (NEDD1)
   Microtubules and associated factors
    gamma-tubulin ring complex
     102398877 (NEDD1)
Cytoskeleton proteins [BR:bbub04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Gamma-tubulin complex components
     102398877 (NEDD1)
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_WDR5 Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40 Beta-prop_WDR36-Utp21_1st WD40_WDHD1_1st WDR55 Beta-prop_WDR3_2nd Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_WDR19_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd EIF3I WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_HPS5 Beta-prop_EIPR1 Beta-prop_IFT122_1st Beta-prop_VPS8 Beta-prop_Aladin eIF2A Beta-prop_IFT140_1st Beta-prop_WDR75_1st NBCH_WD40 WD40_like Beta-prop_SPT8 Beta-prop_WDR35_TULP_N KNTC1_N WD_LRWD1 DUF1668 NRBF2
Other DBs
NCBI-GeneID: 102398877
NCBI-ProteinID: XP_044797400
LinkDB
Position
4:complement(58992130..59043551)
AA seq 668 aa
MKQSESRAVMQENLRFASSGDDVKIWDASSMTLVDKFNPHTAPHVISSVCWSSNNNFLVT
ASSSGDKIVVSSCKCKPVPLLELGEGQKQTCVSLNSTSMYLVSGGLNNTVNIWDLKSKRV
HRSLKDHKDEVTCVTYNWNDCYIASGSLSGEIILHSVTTNLSSTPFGHGNNQSIRHLKYS
LFKKSLLGSVSDNGIVTLWDVNSQSPYHNFDSTHKAPASGICFSPVNELLFVTVGLDKRI
ILYDTSSKKLVKTLVADAPLTAVDFMPDGATLAIGSSRGKIYQYDLRMLKSPIKTISAHK
TSVQCIAFQYSTVLSKSGLNKGCSNKPTAVNKRTANVSAGGGGAQNPGVVRDAATTSIAT
VPPQPTAAAVGKGAVAPQDKAGLPRSINTDTLSKETESGKNQDFSNFDDSGKSSLGDMFS
PVRDDAVVSKGGDESIGKGDGLDFLPQLNSVFPPRKNPVVSSTSVLHSSPLNVFMGSPGK
EENENHDLTAESKKMYLGKQESKDSFKQFAKLISGAETGNLNASPSSNQTRSPEKFEKPE
KEIEAQLINEPPGNGSSTPNPKIASSVTAGVASSLSEKIVDTIGNSRPNAPLSSVQIRFI
QNMIQETLDDFREACHRDIVNLQVEMIKQFHMQLNEMHSLLERYSVNEGLVAEIERLREE
NKRLRAHF
NT seq 2007 nt   +upstreamnt  +downstreamnt
atgaagcagagtgaatcacgtgcagtcatgcaggaaaacctcagatttgcttcatcggga
gatgatgttaaaatatgggatgcttcatctatgacactggtggataaattcaacccacac
accgcaccacatgttatcagctcagtgtgttggagcagcaataataactttctagtgaca
gcatcttccagtggtgacaaaatagttgtttcaagttgcaaatgtaaacctgtcccgctt
ttagagcttggtgaagggcaaaagcagacatgtgtcagtttaaattcaacatctatgtat
ttggtaagcggaggcctaaataatactgttaatatttgggatttaaaatcaaaaagagtt
catcgatctcttaaggatcataaagatgaagtaacttgtgtaacatataattggaatgat
tgctacattgcttctggatctctcagtggtgaaattattttgcacagtgtaaccactaat
ttatctagtactccttttggtcacggtaataaccagtctattcggcacttgaagtactcc
ttatttaagaaatcactcctgggcagtgtttcagataatggaatagtaactctctgggat
gtgaatagtcagagtccataccataactttgacagtacacataaagctccagcttcaggc
atctgtttttctcctgtcaatgaactgctgtttgtaactgtgggcttggataaaagaatc
attctctatgacacttcaagtaagaagctcgtgaaaactttagtggctgatgctcccctg
actgcggtggatttcatgcctgatggagccactttggctattggatcctcccgtgggaaa
atatatcaatatgatttaaggatgctgaaatcaccaattaaaaccatcagtgcacataag
acatctgtgcaatgtatagcatttcagtactccactgttctttctaagtcaggtttgaat
aagggctgttcaaataagcccacagctgtgaacaaacgcactgctaatgtgagcgctggc
ggaggaggagcccagaatcctggagtggtcagagacgcagccaccacatccatcgccaca
gttccgccacagcccacggcagccgctgtggggaagggagcagttgctcctcaggacaaa
gcaggtctgcctcgaagcataaacactgatactttatcaaaggaaacggagagtgggaaa
aatcaggatttctccaactttgatgattctggaaaaagtagtttaggtgacatgttctca
cctgtcagagatgatgctgtagttagcaaaggaggtgatgagtccatcggcaaaggagat
ggccttgactttctaccacagttgaactcagtgtttcctccaagaaaaaatccagtagtt
tcaagcacttcagtattgcattctagtcctcttaatgtctttatggggtctcctgggaaa
gaagaaaatgaaaatcatgatctgacagctgaatctaagaaaatgtatctgggaaaacag
gaatctaaagactccttcaagcagtttgcaaagttgatctccggtgctgaaactggaaat
ctaaatgcctctccatcatctaaccaaacaagaagccctgagaaatttgaaaagccagaa
aaagaaattgaagcccagttaataaatgaacctccaggcaatggatcctcaactccaaat
ccaaagatagcatcctctgtcactgctggagttgctagttcactatcagaaaaaatcgtt
gataccattggaaatagtcggccaaatgcaccgctgtcatctgttcagatccgttttatt
cagaacatgatacaggaaaccctggatgactttagagaagcatgccatagagacattgtg
aatttgcaagtggagatgattaaacagtttcatatgcaattgaatgaaatgcactctttg
ttggaaagatactcagtgaatgaaggtttagtggcagaaattgaaagactacgagaagaa
aacaaaagactgcgggcacacttttga

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