Bubalus bubalis (water buffalo): 102398909
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Entry
102398909 CDS
T05912
Symbol
VPS41
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog isoform X1
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04140
Autophagy - animal
bbub04142
Lysosome biogenesis
bbub04148
Efferocytosis
bbub05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
102398909 (VPS41)
04140 Autophagy - animal
102398909 (VPS41)
04148 Efferocytosis
102398909 (VPS41)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
102398909 (VPS41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bbub04131
]
102398909 (VPS41)
Membrane trafficking [BR:
bbub04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
102398909 (VPS41)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
zf-RING_Vps41
Clathrin
VPS18_solenoid_2nd
zf_RING_Vps8_fungal
WD40_CDC20-Fz
WD40_Prp19
ANAPC4_WD40
Beta-prop_THOC3
Beta-prop_HPS5
WD40_WDHD1_1st
Beta-prop_EML_2
Vps39_1
Beta-prop_RIG_2nd
TPR_PEP5_VPS11
zf-RING_5
Beta-prop_IFT122_1st
TPR_YpiA
zf_RING_Vps8
RIG-I_C
CFAP251_N
Beta-prop_ACSF4
CofB_pilin_dom
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
102398909
NCBI-ProteinID:
XP_006058882
LinkDB
All DBs
Position
8:81495423..81695511
Genome browser
AA seq
854 aa
AA seq
DB search
MAEAEEQETGSLEESTDESEEEESEEEPKLKYERLSNGVTEILQKDAASCMTVHDKFLAL
GTHYGKVYLLDVQGNITQKFEVSPVKINQVSLDESGEHMGVCAEDGKVQVFGLYSGEEFH
ETFDCPIKIIAVHPHFVRSSCKQFVTGGKKLLLFERSWMSRWKSSVLHEGEGNIRSVKWR
GHLIAWANNMGVKIFDITSKQRITNVPRDDISLRPDMYPCSLCWKDNVTLIIGWGTSVKI
CSVKERHASEMRDLPSRYVEIVSQFETEFYISGLAPLCDQLVVLSYVKEVSEKTEREYCA
RPRLDIIQPLLETCEEISSDALTVRGFQENECRDYHLEYSEGESLFYIVSPRDVVVAKER
DQDDHIDWLLEKKKYEEALMAAEISQKNIKRHKILDIGLAYINHLVARGEYDIAARKCQK
ILGKNAALWEYEVYKFKEIGQLKAISPYLPRGDPVLKPLIYEMILHEFLESDYEGFATLI
REWPGDLYNNSVIVQAVRDHLKKDSQNRTLLKTLAELYTYDKNYGNALEIYLTLRHKDVF
QLIHKHNLFSSIKDKIVLLMDFDSEKAVDMLLDNEDKISIKKVVEELEDRPELQHVYLHK
LFKRDHHKGQRYHEKQISLYAEFDRPNLLPFLRDSIHCPLEKALEICQQRNFVEETVYLL
SRMGNSRSALKMIMEELHDVDKAIEFAKEQDDAELWEDLILYSIDKPPFITGLLNNIGTH
VDPILLIHRIKEGMEIPNLRDSLVKILQDYNLQILLREGCKKILVADSLSLLKKMHRTQM
KGILVDEENICESCLSPILPSDAAKPFSMVVFHCRHMFHKECLPVPSMTSPAQFCNICSA
KHRGPGSAILEMKK
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagcagaggagcaggaaactggatctctggaagaatctacagatgagtctgag
gaagaagagagtgaagaggagcccaaactgaagtacgaaaggctctccaatggcgtaact
gaaatccttcagaaagatgctgctagctgcatgacggtccatgacaagttcttggcactg
ggcacacattatggcaaggtttatttacttgatgtccaggggaacatcactcagaagttt
gaagtaagtcctgtgaagataaatcaggttagcctggatgaaagtggagaacacatgggc
gtgtgtgcagaggatggcaaggtgcaggtgtttggactgtattctggagaagaatttcat
gagacttttgactgtcccattaaaatcattgctgtgcacccgcatttcgtgagatccagc
tgcaagcagtttgtgacgggagggaagaagttgctgctgtttgaacgatcttggatgagc
agatggaagtcttcagttctgcatgaaggggaagggaacataaggagtgtgaagtggagg
ggccatctgattgcctgggccaataatatgggcgtgaagatttttgacatcacctcaaag
cagagaatcacgaacgtgccccgggatgatataagtcttcgcccagatatgtatccctgt
agcctctgctggaaggacaatgtgacgctgatcattggctgggggacgtctgtcaagata
tgctcggtgaaggaacggcacgccagtgaaatgagggacttgccaagtcgatatgttgaa
atagtgtctcagtttgaaactgaattctacatcagtggactggcacctctctgtgatcag
cttgttgtactttcctacgtaaaggaggtttctgaaaaaacggaaagagaatactgcgcc
agacccagattggatatcatccagccacttttggagacttgtgaagagatttcttctgat
gctctgaccgtgaggggttttcaggaaaatgaatgtagagattatcacttagagtactca
gaaggggagtcactcttttacatcgtgagtccaagggatgttgttgtagcgaaggaacga
gaccaagatgaccacatcgactggcttcttgaaaagaagaaatatgaagaagctttgatg
gcagctgaaattagccaaaagaacattaaaagacataagattctggacatcggcttggcg
tatataaaccacctggtggcaagaggagagtatgatatagcagcacgcaaatgccagaaa
attcttggaaaaaatgcagcactctgggaatacgaagtttataaatttaaagaaattgga
cagcttaaggcgattagtccttacttgccaagaggggatccagttctgaaaccactcatc
tatgaaatgatcttacatgaatttttggaaagtgattatgagggttttgccacgttgatc
cgagaatggccgggagatctgtacaacaattcagtaatagttcaagcggttcgggatcac
ctgaagaaagatagtcagaacaggaccttacttaaaaccctggcagaattgtacacctac
gacaaaaactacggcaatgctttggaaatatacctaacactaagacacaaggacgttttc
cagttgatccacaagcataatcttttcagttctatcaaggataaaattgttttattaatg
gattttgattctgagaaagctgttgacatgcttctggacaatgaagataaaatttcaatt
aaaaaagtagtggaagaattagaagacagaccggagttgcagcacgtgtatctgcataag
cttttcaaaagagaccaccataagggacagcgctaccatgagaagcagatcagcctttat
gctgaattcgaccgacccaacttgcttccatttctccgagacagtatccattgccccctt
gaaaaggctcttgagatctgtcaacagagaaactttgtagaagagacagtttatcttctc
agccgaatgggtaacagccgaagtgccctgaagatgatcatggaggaattgcatgatgtt
gataaagcgattgaatttgccaaggagcaggacgatgcagaactctgggaagatctgatt
ttatattccattgacaaaccaccatttatcaccggcttgttaaacaacattggcacgcat
gttgacccgattctactaattcaccgtattaaggaaggaatggagattcctaatttgaga
gactccttagttaaaattctacaagactacaatttacaaattctgcttcgtgaaggctgt
aagaaaattctcgtagccgactcactgtccttactaaagaagatgcaccgaactcagatg
aaaggcattctagttgatgaggagaacatctgtgagtcctgcctttcccctattcttcca
tcagatgcagcaaagcccttcagcatggtggtcttccactgccggcatatgttccacaag
gagtgcctgcccgtgcccagcatgacctctcctgcgcagttctgtaacatctgcagtgcg
aagcaccggggaccaggaagtgccattttggagatgaaaaaatag
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