Bubalus bubalis (water buffalo): 102398984
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Entry
102398984 CDS
T05912
Symbol
VPS53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bbub04131
]
102398984 (VPS53)
Membrane trafficking [BR:
bbub04131
]
Protein recycling
Others
EARP complex
102398984 (VPS53)
Endosome - Golgi transport
Tethering complex
GARP complex
102398984 (VPS53)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
GrpE
FBF1
Sec8_N
Laminin_II
Tropomyosin
Syndetin_C
NBD94
COG3_N
hAT-like_RNase-H
COG5_N
NFRKB_winged
FUSC
XhlA
MCPsignal
Motif
Other DBs
NCBI-GeneID:
102398984
NCBI-ProteinID:
XP_006052773
LinkDB
All DBs
Position
3:complement(40865782..40990639)
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AA seq
832 aa
AA seq
DB search
MMEEEELEFVEELEAVLQLTPDVQLAIEQVFPSQDPLDRADFNAVEYINTLFPTEQSLAN
IDEVVNKIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQKAIQQLFGKIKDIKDKAEK
SEQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRRRQYGEVANLLQG
VMNVLEHFHKYMGIPQIRQLSERVKAAQTELGQQILADFEEAFPSQGTKRPGGPSNVLRD
ACQVANILDPRIKQEIIKKFIKQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLVDYEE
KYGRMFPREWYMAERIAVEFCHITRTELAKIMRTRAKEIEVKLLLFAIQRTTNFEGFLAK
RFSGCTLTDGTLKKLESPPASTNPFLEDEPAAEMEELAMEKGDLEQPKKPKAPDNPFHGI
VSKCFEPHLYVYIESQDKNLGELIERFVADFKAQGPPKPNMDEGGAVLPSCADLFVYYKK
CMVQCSQLSTGEPMIALTTIFQKYLREYAWKILSGNLPKTTSSSGGLTISSLLKEKEGSE
AAKFTLEELCLICSILSTAEYCLATTQQLEEKLKEKVDVSLTERINLTGEMDTFSTVISS
SIQLLVQDLDAACDPALTAMSKMQWQNVEHVGDQSPYVTSVILHIKQNVPIIRDNLASTR
KYFTQFCIKFANSFIPKFITHLFKCKPISMVGAEQLLLDTHSLKMVLLDLPSIGSQVVRK
APASYTKIVVKGMTRAEMILKVVMAPHEPLVVFVDNYIKLLTDCNTETFQKILDMKGLKR
SEQSSMLELFRQRLPAPPSGPEGSSSLSLLAPTPEQESSRIRKLEKLIKKRL
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggaggaggaactggagttcgtagaagagctggaagccgtgctgcagctcacg
cccgacgtgcagctcgccatcgagcaggtatttccaagccaggatcctctagatcgagca
gatttcaatgctgtggagtatatcaacaccctgttcccaacagagcaatctctggcaaac
attgatgaagtcgtgaacaagattagactgaaaataaggagactggatgacaacattcga
actgtcgtaagaggtcaaacaaatgtgggacaggatggcaggcaagcacttgaagaggcc
cagaaagcaatacagcagctttttggaaaaatcaaagatatcaaagacaaagcagaaaaa
tcagagcaaatggtgaaggaaatcacccgcgacattaagcagttagatcacgccaaacgc
cacctgaccacctcgatcacaacgctgaaccacctgcatatgctggcgggtggcgtggat
tccctcgaagccatgaccaggcgaaggcagtacggagaagttgctaatcttcttcagggc
gtaatgaatgttctggagcacttccacaaatatatgggcattccacagatccggcagctt
tctgaaagagtgaaggcggcccagactgagttaggacagcaaatcctggccgattttgaa
gaagcttttccttcccagggcacgaagaggccaggaggacccagcaacgttctacgagat
gcatgtcaggttgctaacatcttggaccccagaatcaaacaggaaatcatcaaaaagttt
attaaacagcatctgtcagagtacctagtactttttcaagaaaaccaagatgttgcctgg
ctggacaaaatcgaccgtcgctatgcctggatcaaacgccagctcgtggactacgaggag
aaatatggccggatgttcccacgtgagtggtacatggcggagagaattgccgtagaattt
tgccacatcacaaggacagaacttgccaagatcatgcgtacaagagcaaaggaaattgaa
gtgaaattgcttctctttgctattcagagaacgactaactttgagggatttcttgcaaaa
cgtttttccgggtgcaccctgacagatggaacgctgaaaaaacttgaatctccacccgca
tccaccaatcccttcctggaagatgagccagcagcagagatggaggaactggcaatggag
aaaggagatttagagcaacctaagaagcctaaagccccagacaatccatttcacggcatt
gtttccaagtgttttgagccgcatctctacgtgtacattgagtcccaggacaaaaacctt
ggagagctgatagaacggtttgtggccgatttcaaggcccagggcccacctaagcccaat
atggacgaggggggtgccgtgctccccagctgcgccgacctcttcgtctactacaagaag
tgcatggtgcagtgctcgcagctcagtaccggggagcccatgatcgccctgaccactatt
ttccagaagtacctccgcgagtatgcctggaaaatcctctctggcaacctgcccaaaacc
acaagcagcagtggcgggctgaccatcagcagcctgctcaaggaaaaggagggctccgag
gcagccaagttcaccctggaggagctctgcctcatctgcagcatcctgagcaccgccgag
tactgcctggccaccacccagcagctggaagagaaactcaaggagaaggtcgacgtgagt
ctgactgaacgaatcaatctgactggagaaatggacacgttcagcactgtcatctccagc
agcattcagctgttggttcaggacctggatgctgcctgcgaccccgcccttacggccatg
agcaagatgcagtggcagaacgtggagcacgttggtgaccagagcccctacgtcacgtcg
gtcatccttcacattaaacagaacgtccccatcatccgcgacaacctggcctccacgcgg
aagtacttcacgcagttctgcattaaatttgcaaactccttcattccgaagttcatcacc
cacctcttcaagtgcaagccgatcagcatggtgggggcagaacagctactgctggacaca
cactccctgaagatggtcctgcttgatctgccttccatcggctctcaggtggtgaggaaa
gccccggccagttacaccaagatcgtggtgaaaggcatgacccgcgcggagatgatcctc
aaggttgtgatggcccctcacgagccgttggtggtatttgtggacaattacatcaagctc
ctgacagactgcaacacagaaaccttccagaagattctggacatgaaggggctgaagcgg
agtgagcagagcagcatgctggagctcttccgccagaggctccccgccccgccctcagga
cccgaaggctccagctccctgtccctcctggctccaactccagaacaggagtcctcgcgc
atccgcaaactggagaaactgattaaaaagagactgtag
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