Bubalus bubalis (water buffalo): 102399200
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Entry
102399200 CDS
T05912
Symbol
SORCS3
Name
(RefSeq) VPS10 domain-containing receptor SorCS3 isoform X1
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bbub04131
]
102399200 (SORCS3)
Membrane trafficking [BR:
bbub04131
]
Endocytosis
Others
Others
102399200 (SORCS3)
Endosome - Lysosome transport
102399200 (SORCS3)
Endosome - Golgi transport
102399200 (SORCS3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
102399200
NCBI-ProteinID:
XP_025130203
LinkDB
All DBs
Position
23:25407884..26045192
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AA seq
1222 aa
AA seq
DB search
MEAARTERPAGWPGAPLARTGLLLLSTWVLAGAEITWDTTGGPGRLAALASRSPALPRLS
PLAMASQWPEELATVRRGTALERRPGPEPLPQPSSGSGGKKQGEAGGLSPASSRWGPGIS
TPGKPSGVRRSRRAQPPSALEHGDARATVLADGSKGSRSLAKGLREEVKAPRTGGSAAEE
LRLPSTSFALTGDSAHNQAMVHWSGHNSSVILILTKLYDFNLGSVTESSLWRSTDYGTTY
EKLNDKVGLKTVLSYLYVNPTNKRKIMLLSDPEIESSILISSDEGATYQKYRLTFYIQSL
LFHPKQEDWVLAYSLDQKLYSSMDFGRRWQLMHERITPNRFYWSVAGLDKEADLVHMEVR
TADGYAHYLTCRIQECAETTRSGPFARSIDISSLVVQDEYIFIQVTTGGRASYYVSYRRE
AFAQIKLPKYSLPKDMHIISTNENQVFAAVQEWNQNDTYNLYISDTRGIYFTLAMENIKS
SRGLMGNIIIELYEVAGIKGIFLANKKVDDQVKTYITYNKGRDWRLLQAPDADLRGDPVH
CLLPFCSLHLHLQISENPYSSGRISSKETAPGLVVATGNIGPELSYTDISVFISSDGGNT
WRQIFDEEYNVWFLDWGGALMAMKHTPLPVRHLWVSFDEGHSWDKYGFTSVPLFVDGALV
EAGVETQIMTVFGHFSLRSEWQLVKVDYKSIFSRHCSKEDYQTWHLLNQGEPCVMGERKI
FKKRKPGAQCALGRDSSGTVVSEPCVCADWDFECDYGYERHGESQCVPAFWYNPASPSKD
CSLGQSYFNSTGYRRIVSNNCTDGLREKYTAKAQMCPGKAPHGLHVATTDGRLVAEQGHN
ATFIILMEEGDLQRTNIQLDFGDGIAVSYANFSPIEDGIKHVYKSAGIFQVTAYAENNLG
SDTAVLFLHVVCPVEHVHLRVPFVAIRNKEVNISAVVWPSQLGTLTYFWWFGNSTKPLIT
LDSSISFTFLAEGTNTITVQVAAGNALIQDTKDIAVHEYFQSQLLSFSPNLDYHNPDIPE
WRQDIANVIKRALVKVTSVPEDQILIAVFPGLPTSAELFILPPKNLTERRKGNEGDLEQI
VETLFNALNQNLVQFELKPGVQVIVYVTQLTLAPLVDAGAGHSSSAMLMLLSVVFVGLAV
FLIYKFKRKIPWINIYAQVQHDKEQEMIGSVSQSENAPKITLSDFTEPEELLDKELDTRV
IGGIATIANSESTKEIPNCTSV
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcgcgcaccgagcgccctgcaggctggcccggggcgcccctcgcccggacc
gggctcctgctcctgtcgacgtgggtcctggccggcgccgagatcacttgggacaccacg
ggcggtcccgggcgcctggcggctctggcttctcggtccccggcgctgcctcgtctctca
ccgctggcaatggcaagccagtggccggaggagctggcgactgtacggagaggcaccgca
ctggagcgccggccgggaccagagccgctgccccagccaagcagtggcagcggcggaaag
aagcaaggagaagccggagggctgtctccagcaagctcgcggtggggaccgggcatctct
actcctggcaagcctagcggcgtgaggaggagtcgtcgggcgcagccccccagtgccctg
gaacacggggatgcccgggctactgtcttagccgatggttccaaaggaagccgctctctg
gccaagggtctccgggaggaggtgaaggcaccacggaccgggggttcagcggctgaagag
ctccggttacccagcacctcgttcgcgctgaccggggactcggctcacaaccaagccatg
gtgcactggtcgggacacaacagcagtgttatacttatcctgacgaagctgtatgacttc
aacctggggagcgtgacagagagctcactttggagatcaacagattatggcaccacctat
gaaaagctgaatgacaaagtgggtttgaagactgtcctcagttacctctacgtcaacccc
accaacaaaaggaagatcatgcttcttagtgatcctgagatagagagcagcatattgatc
agctcagatgaaggggcaacctatcagaaataccggctcaccttctacatccagagtctg
ctctttcaccccaagcaggaggactgggtactggcctacagtttggatcaaaagctctac
agctccatggactttggaagacggtggcaactcatgcatgaacgcatcacacccaacagg
ttttactggtcagtggccggactggataaggaggcagacctggtgcacatggaggtgcgg
acagcggatggatatgctcactacctcacctgcaggatccaggaatgtgccgagactact
cggagtgggccttttgcccgctccatcgacatcagttccctggtggtccaggatgaatat
atattcattcaggtaacaactggtggaagagccagctactacgtgtcctaccggagagag
gccttcgctcagataaagctgcccaagtactcactgcccaaggacatgcacatcattagt
accaatgagaaccaagtgtttgcagccgtccaggaatggaaccagaatgacacatacaac
ctctacatctcagacacacgtgggatctacttcaccctggccatggagaacattaagagc
agccgaggtctgatgggaaacatcattattgaattgtatgaggtagccggtatcaaaggg
atattcctggcaaacaagaaggtggatgaccaggtgaagacatacatcacctacaataaa
ggcagggattggcgcctcctgcaagctccagatgcggacctgagaggggacccagtgcac
tgcctgctgcctttctgctccctacacctacacttgcagatctccgaaaatccatattcc
tcaggaagaatctccagcaaggagacagctccagggctcgtggtggctacaggcaacatt
ggtccagagctctcatatactgacatcagtgtgttcatctcttctgatgggggcaacaca
tggagacagatctttgatgaagagtacaatgtctggttcctagactggggtggcgccctc
atggccatgaaacacacacctctgccagtcaggcatttgtgggtgagttttgatgagggc
cactcctgggacaagtatggtttcacttcggttcctctctttgtggatggggccctggtg
gaggcaggcgtggagacccagattatgacagtttttggccacttcagcctccgctcagaa
tggcagttggtgaaggtggactacaaatcaatcttcagccgacactgtagcaaggaggac
tatcagacctggcacctgctcaatcagggggagccttgcgtcatgggagaaaggaaaata
ttcaagaaacgcaagccaggagctcagtgtgccctgggccgagactcctcagggacagtg
gtctcagaaccctgtgtctgtgctgactgggactttgaatgtgactatggctatgagaga
catggagagagccagtgtgtccctgctttctggtacaatccagcatctccatccaaggac
tgcagccttggtcaaagctactttaacagtactgggtaccggcgaatcgtgtccaacaac
tgcacagacggcctgagggagaagtataccgccaaggcccagatgtgccctggaaaggcc
ccgcatggcctccacgtggcgacgaccgatgggcgcctggtggcggagcaggggcacaat
gcaaccttcatcatcctcatggaggagggtgatctccaaaggacaaacatccagcttgac
tttggggacgggattgcagtgtcctatgctaatttcagtcccattgaggacggcatcaag
cacgtgtacaagagtgcaggcatcttccaggtgacagcctatgcggagaacaacctaggc
tcagacacggcggtgctcttcctgcatgtggtttgtcctgtggagcatgttcatctccgg
gtcccctttgttgccataagaaataaggaggtcaacatcagtgcagttgtgtggcccagc
caactggggactcttacgtatttctggtggttcggcaatagtacaaagcccctcatcacc
ttggacagcagcatttccttcacgttcctagcagagggaactaataccatcactgtccag
gtggctgctgggaatgccctcatccaggacacaaaagatatcgctgttcacgaatacttc
cagtcccagctcttatctttctctcctaatctggattaccacaatcctgacattccagag
tggaggcaagatattgccaatgtgatcaagcgggctctggtgaaagtaaccagtgtcccg
gaagaccagatcctcattgctgtgttccctggcctccccacttctgcagagctcttcatt
cttccccccaagaacttgacagagaggaggaaaggcaatgaaggggacctggaacaaatt
gtagagactctgtttaatgctctaaaccaaaacttggtccagtttgagctgaagccaggg
gttcaagtcattgtgtatgtcacacagctgaccttagctccgctggtggacgctggtgct
gggcacagcagctcggccatgcttatgctcttgtcagtagtgtttgtcggcctggctgtg
tttttgatctacaagtttaaaaggaaaataccctggattaacatctatgctcaagtccaa
catgacaaggagcaggagatgattgggtcagtgagccaaagtgaaaacgcccccaaaatc
acactcagtgacttcaccgagcccgaggaactgctggacaaagagctggacacccgggtc
ataggaggcattgccaccattgcaaacagcgaaagcacaaaggagatccccaactgcact
agcgtttaa
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