Bubalus bubalis (water buffalo): 102399213
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Entry
102399213 CDS
T05912
Symbol
POLB
Name
(RefSeq) DNA polymerase beta isoform X2
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03410
Base excision repair
bbub05166
Human T-cell leukemia virus 1 infection
bbub05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
102399213 (POLB)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
102399213 (POLB)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
102399213 (POLB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbub03400
]
102399213 (POLB)
Enzymes [BR:
bbub01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
102399213 (POLB)
DNA repair and recombination proteins [BR:
bbub03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
102399213 (POLB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
102399213 (POLB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
HHH_8
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_5
HHH
HHH_2
Motif
Other DBs
NCBI-GeneID:
102399213
NCBI-ProteinID:
XP_006075772
LinkDB
All DBs
Position
1:complement(8410019..8434482)
Genome browser
AA seq
275 aa
AA seq
DB search
MSKRKAPQETLNGGITDMLTELANFEKNVNQAIHKYNAYRKAASVIAKYPHKIKSGAEAK
KLPGVGTKIAEKIDEFLATGKLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIK
TLEGAESSGDMDVLLTHPSFTSESAKQPKLLHRVVEQLQKIHFITDTLSKGETKFMGVCQ
LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRP
LGVTGVAGEPLPVDSEKDIFDYIQWKYREPKDRSE
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacggaaggcgccgcaggagactctcaacgggggcatcaccgacatgctcaca
gaactcgcaaactttgagaagaacgtgaaccaggctatccacaaatacaatgcctacaga
aaagcagcatctgtgatagcaaagtacccacacaaaataaagagtggagcggaagctaag
aaactgcctggagtaggaacaaaaattgctgaaaaaattgatgagtttttagctactgga
aaattgcgtaaactggaaaagattcggcaggatgatacgagttcatccatcaatttcctg
actcgagttagtggcattggtccatctgctgcaaggaagtttgtagatgaaggaattaag
acattagaaggtgcagagtccagtggtgacatggatgtccttctcacccatccaagcttt
acctctgagtcagccaaacagcccaaactgttacatcgtgttgtggagcagttacaaaag
atccattttattacagacactctgtcaaagggtgaaacaaagttcatgggtgtttgccag
cttcccagtaaaaacgatgaaaaggaatatccacacaggagaattgatatcaggttgata
cccaaggatcagtattactgcggtgttctctatttcactgggagtgatattttcaataag
aatatgagagctcatgccctagaaaaaggcttcacaatcaatgaatacacaatccgtccc
ttgggcgtcactggcgttgccggggagcccctgcccgtggacagtgagaaggacatcttc
gactacatccagtggaaataccgggagcccaaggaccgaagcgagtga
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